| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300969
Identifier: 146300969
GI number: 146300969
Start: 3841210
End: 3841650
Strand: Direct
Name: 146300969
Synonym: Fjoh_3224
Alternate gene names: NA
Gene position: 3841210-3841650 (Clockwise)
Preceding gene: 146300968
Following gene: 146300979
Centisome position: 63.0
GC content: 25.85
Gene sequence:
>441_bases ATGACCACAACTTTTATTTATACCAGAAGATCAGTAGGATTACCTTGGTTTTTAGAAATATGTATAGTTTTACTCCTTTT AGCTGCATATTTTGTCGACAAATATAAATTCAATAAATTAGTAAAAAGACAGAAAAAAGAACTAGATTATTTTAAACGGC ATGGAGATAAAATTGTTGTTAAATATGATGAGTTAGTCTTAAAAACAAACTGCTGGATAGAAAATAAAGAAGACTTAGAA AAAGTGTCAGATAAGATAAGTAGAAATCTTATAATTTTAGAAAAAACACATAGAGGTCATCATTTTAAAGTAGAATATGA AATTTATATGGAGCCTGAAATATTAAGAATGAAACTTGCGTTAAAATATGAATTAGACTTTTACTACAATCCCAGTAATT TTGATGATAATCTGCTGGATTTTGAATTCTTATTTCAATAA
Upstream 100 bases:
>100_bases ATTCGCACGGATAAATAATTTAAAATTATTTACAAAGATCACTTTAAATTTTTATAAGAAACAAAATACTTAAATTCTAG TTTTATAAACTTATGCAATT
Downstream 100 bases:
>100_bases ATCTTACCTCCGCTGGCGAGAGCGTATCACTCTTGAACACAAAGTTTATTTAACCGAATTAAGCCTCAAGCGCACTAGCC GAATGCTCACGCGGAGCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MTTTFIYTRRSVGLPWFLEICIVLLLLAAYFVDKYKFNKLVKRQKKELDYFKRHGDKIVVKYDELVLKTNCWIENKEDLE KVSDKISRNLIILEKTHRGHHFKVEYEIYMEPEILRMKLALKYELDFYYNPSNFDDNLLDFEFLFQ
Sequences:
>Translated_146_residues MTTTFIYTRRSVGLPWFLEICIVLLLLAAYFVDKYKFNKLVKRQKKELDYFKRHGDKIVVKYDELVLKTNCWIENKEDLE KVSDKISRNLIILEKTHRGHHFKVEYEIYMEPEILRMKLALKYELDFYYNPSNFDDNLLDFEFLFQ >Mature_145_residues TTTFIYTRRSVGLPWFLEICIVLLLLAAYFVDKYKFNKLVKRQKKELDYFKRHGDKIVVKYDELVLKTNCWIENKEDLEK VSDKISRNLIILEKTHRGHHFKVEYEIYMEPEILRMKLALKYELDFYYNPSNFDDNLLDFEFLFQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17864; Mature: 17733
Theoretical pI: Translated: 8.18; Mature: 8.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTFIYTRRSVGLPWFLEICIVLLLLAAYFVDKYKFNKLVKRQKKELDYFKRHGDKIVV CCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE KYDELVLKTNCWIENKEDLEKVSDKISRNLIILEKTHRGHHFKVEYEIYMEPEILRMKLA EEEEEEEEECCCCCCHHHHHHHHHHHHCCEEEEEECCCCCEEEEEEEEEECCHHEEEEEE LKYELDFYYNPSNFDDNLLDFEFLFQ EEEEEEEEECCCCCCCCCCCEEEECC >Mature Secondary Structure TTTFIYTRRSVGLPWFLEICIVLLLLAAYFVDKYKFNKLVKRQKKELDYFKRHGDKIVV CEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE KYDELVLKTNCWIENKEDLEKVSDKISRNLIILEKTHRGHHFKVEYEIYMEPEILRMKLA EEEEEEEEECCCCCCHHHHHHHHHHHHCCEEEEEECCCCCEEEEEEEEEECCHHEEEEEE LKYELDFYYNPSNFDDNLLDFEFLFQ EEEEEEEEECCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA