| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is ilvC
Identifier: 146300609
GI number: 146300609
Start: 3393112
End: 3394581
Strand: Reverse
Name: ilvC
Synonym: Fjoh_2860
Alternate gene names: 146300609
Gene position: 3394581-3393112 (Counterclockwise)
Preceding gene: 146300610
Following gene: 146300608
Centisome position: 55.68
GC content: 36.05
Gene sequence:
>1470_bases ATGGCAAATTATTTCAACACACTACCACTTAGATTACAATTAGAGCAACTAGGAGTTTGCGAATTTATGGAGCAATCAGA ATTTGCAGACGGAATTTCAGCATTAGCTGGTAAAAAAGTTGTCATTGTAGGTTGTGGTGCACAAGGTTTGAATCAAGGTT TAAACATGAGAGATTCAGGTTTAGATATTTCTTATGCTTTGCGTGCAGATGCAATTGCAGAAAAGAGAGCTTCATATAAA AATGCAACTGAAAACGGGTTTAAAGTAGGTACTTATGAAGAGTTGATTCCAACAGCTGATTTAGTTTGTAACCTTACTCC GGATAAACAGCATACTTCTGTAGTTAATGCTATTATGCCATTAATGAAACAAGGATCAACTTTAGCTTATTCTCACGGTT TCAACATTGTTGAAGAAGGAATGCAGATTCGTAAAGATATTACAGTAATTATGTGTGCTCCTAAATGTCCTGGTTCTGAG GTTCGTGAAGAGTACAAAAGAGGATTTGGTGTGCCAACACTTATTGCAGTTCACCCAGAAAACGATCCAAACGGATTTGG TTTAGATCAGGCAAAAGCTTACGCTGTAGCAACTGGAGGACACAAAGCAGGAGTTTTAAGATCATCTTTCGTAGCTGAAG TAAAATCAGATTTAATGGGTGAGCAGACAATTCTTTGCGGATTGCTTCAAACTGGATCTATTTTATGCTTTGATAAAATG GTTGAAAAAGGAATCGATGCTGCTTATGCTTCAAAATTAATTCAATATGGATGGGAAACTATCACTGAAGCTTTGAAACA TGGTGGTATTACAAACATGATGGATCGTTTAAATAATCCTTCTAAAATTGAAGCTTACGAATTAGCAGAAGAATTAAAAG ACATCATGCGTCCGTTATTCCAAAAACACCAAGACGATATTATTTCTGGAGAATTCTCAAGAACTATGATGATCGACTGG GCTAACGACGATGTTAACTTATTAAAATGGAGAGCTGCAACAGGAGAAACTAACTTCGAAAAAACAGCGCCGCAAGAAGC TCCAATCTCTGAGCAGGAATATTTTGATAACGGAGTATTAATGATTGCTATGGTAAAAGCGGGTGTTGAATTAGCTTTTG AAACTATGACAGAAGCTGGTATCATCGAAGAATCTGCTTACTACGAGTCATTACACGAATTACCATTAATTGCTAATACT ATCGCTAGAAAGAAATTATTCGAAATGAACCGTGTAATTTCTGATACTGCTGAGTACGGATGTTATTTATTTGATCATGC TTGTAAGCCATTATTGACTGAATTCATGAAAAAAGTAGAAACTAACATTATTGGTAAACCATTCTCAACTTCAAATGGAG TAGATAATACGGTATTAATTGCTGTTAACAAAGAAATTCGTCAGCACCCTATCGAAGAAGTAGGAGCCTGGTTACGTGAG TCTATGACAGCAATGAAAAAAATTGGATAA
Upstream 100 bases:
>100_bases ATTACTGGAAACATTCAAATAACAATTTAAAGACGGTTTAGGCCGTAATCATAAAAATAATCAATTATTAAATTTCATTT CATTAATATTTTAAAACAAA
Downstream 100 bases:
>100_bases ATAAATTTGGGAATTTCCGCCCATGTTAAGGTGGAATTTGCTCTGTATCAATGTTTTGAATTAATATTTTGAATTAGTAA GCACTTATTAAGTAAATAGA
Product: ketol-acid reductoisomerase
Products: NA
Alternate protein names: Acetohydroxy-acid isomeroreductase; Alpha-keto-beta-hydroxylacil reductoisomerase
Number of amino acids: Translated: 489; Mature: 488
Protein sequence:
>489_residues MANYFNTLPLRLQLEQLGVCEFMEQSEFADGISALAGKKVVIVGCGAQGLNQGLNMRDSGLDISYALRADAIAEKRASYK NATENGFKVGTYEELIPTADLVCNLTPDKQHTSVVNAIMPLMKQGSTLAYSHGFNIVEEGMQIRKDITVIMCAPKCPGSE VREEYKRGFGVPTLIAVHPENDPNGFGLDQAKAYAVATGGHKAGVLRSSFVAEVKSDLMGEQTILCGLLQTGSILCFDKM VEKGIDAAYASKLIQYGWETITEALKHGGITNMMDRLNNPSKIEAYELAEELKDIMRPLFQKHQDDIISGEFSRTMMIDW ANDDVNLLKWRAATGETNFEKTAPQEAPISEQEYFDNGVLMIAMVKAGVELAFETMTEAGIIEESAYYESLHELPLIANT IARKKLFEMNRVISDTAEYGCYLFDHACKPLLTEFMKKVETNIIGKPFSTSNGVDNTVLIAVNKEIRQHPIEEVGAWLRE SMTAMKKIG
Sequences:
>Translated_489_residues MANYFNTLPLRLQLEQLGVCEFMEQSEFADGISALAGKKVVIVGCGAQGLNQGLNMRDSGLDISYALRADAIAEKRASYK NATENGFKVGTYEELIPTADLVCNLTPDKQHTSVVNAIMPLMKQGSTLAYSHGFNIVEEGMQIRKDITVIMCAPKCPGSE VREEYKRGFGVPTLIAVHPENDPNGFGLDQAKAYAVATGGHKAGVLRSSFVAEVKSDLMGEQTILCGLLQTGSILCFDKM VEKGIDAAYASKLIQYGWETITEALKHGGITNMMDRLNNPSKIEAYELAEELKDIMRPLFQKHQDDIISGEFSRTMMIDW ANDDVNLLKWRAATGETNFEKTAPQEAPISEQEYFDNGVLMIAMVKAGVELAFETMTEAGIIEESAYYESLHELPLIANT IARKKLFEMNRVISDTAEYGCYLFDHACKPLLTEFMKKVETNIIGKPFSTSNGVDNTVLIAVNKEIRQHPIEEVGAWLRE SMTAMKKIG >Mature_488_residues ANYFNTLPLRLQLEQLGVCEFMEQSEFADGISALAGKKVVIVGCGAQGLNQGLNMRDSGLDISYALRADAIAEKRASYKN ATENGFKVGTYEELIPTADLVCNLTPDKQHTSVVNAIMPLMKQGSTLAYSHGFNIVEEGMQIRKDITVIMCAPKCPGSEV REEYKRGFGVPTLIAVHPENDPNGFGLDQAKAYAVATGGHKAGVLRSSFVAEVKSDLMGEQTILCGLLQTGSILCFDKMV EKGIDAAYASKLIQYGWETITEALKHGGITNMMDRLNNPSKIEAYELAEELKDIMRPLFQKHQDDIISGEFSRTMMIDWA NDDVNLLKWRAATGETNFEKTAPQEAPISEQEYFDNGVLMIAMVKAGVELAFETMTEAGIIEESAYYESLHELPLIANTI ARKKLFEMNRVISDTAEYGCYLFDHACKPLLTEFMKKVETNIIGKPFSTSNGVDNTVLIAVNKEIRQHPIEEVGAWLRES MTAMKKIG
Specific function: Valine and isoleucine biosynthesis; second step. [C]
COG id: COG0059
COG function: function code EH; Ketol-acid reductoisomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ketol-acid reductoisomerase family
Homologues:
Organism=Escherichia coli, GI1790210, Length=489, Percent_Identity=75.2556237218814, Blast_Score=736, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6323387, Length=256, Percent_Identity=31.640625, Blast_Score=109, Evalue=9e-25,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 480 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): ILVC_FLAJ1 (A5FFY3)
Other databases:
- EMBL: CP000685 - RefSeq: YP_001195200.1 - ProteinModelPortal: A5FFY3 - SMR: A5FFY3 - STRING: A5FFY3 - GeneID: 5090489 - GenomeReviews: CP000685_GR - KEGG: fjo:Fjoh_2860 - eggNOG: COG0059 - HOGENOM: HBG297205 - OMA: EKHMDDI - ProtClustDB: PRK05225 - BioCyc: FJOH376686:FJOH_2860-MONOMER - HAMAP: MF_00435 - InterPro: IPR008927 - InterPro: IPR013023 - InterPro: IPR000506 - InterPro: IPR013328 - InterPro: IPR013116 - InterPro: IPR014359 - InterPro: IPR016040 - Gene3D: G3DSA:3.40.50.720 - Gene3D: G3DSA:1.10.1040.10 - PANTHER: PTHR21371 - PIRSF: PIRSF000116 - TIGRFAMs: TIGR00465
Pfam domain/function: PF01450 IlvC; PF07991 IlvN; SSF48179 6DGDH_C_like
EC number: =1.1.1.86
Molecular weight: Translated: 54051; Mature: 53919
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: ACT_SITE 132-132
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANYFNTLPLRLQLEQLGVCEFMEQSEFADGISALAGKKVVIVGCGAQGLNQGLNMRDSG CCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHCCCCCCCCC LDISYALRADAIAEKRASYKNATENGFKVGTYEELIPTADLVCNLTPDKQHTSVVNAIMP CCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCHHHEEECCCCHHHHHHHHHHHH LMKQGSTLAYSHGFNIVEEGMQIRKDITVIMCAPKCPGSEVREEYKRGFGVPTLIAVHPE HHHCCCEEEECCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEEECCC NDPNGFGLDQAKAYAVATGGHKAGVLRSSFVAEVKSDLMGEQTILCGLLQTGSILCFDKM CCCCCCCCCHHCEEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHH VEKGIDAAYASKLIQYGWETITEALKHGGITNMMDRLNNPSKIEAYELAEELKDIMRPLF HHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH QKHQDDIISGEFSRTMMIDWANDDVNLLKWRAATGETNFEKTAPQEAPISEQEYFDNGVL HHHCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHCCCEE MIAMVKAGVELAFETMTEAGIIEESAYYESLHELPLIANTIARKKLFEMNRVISDTAEYG EEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH CYLFDHACKPLLTEFMKKVETNIIGKPFSTSNGVDNTVLIAVNKEIRQHPIEEVGAWLRE HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECHHHHHCCHHHHHHHHHH SMTAMKKIG HHHHHHHCC >Mature Secondary Structure ANYFNTLPLRLQLEQLGVCEFMEQSEFADGISALAGKKVVIVGCGAQGLNQGLNMRDSG CCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHCCCCCCCCC LDISYALRADAIAEKRASYKNATENGFKVGTYEELIPTADLVCNLTPDKQHTSVVNAIMP CCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCHHHEEECCCCHHHHHHHHHHHH LMKQGSTLAYSHGFNIVEEGMQIRKDITVIMCAPKCPGSEVREEYKRGFGVPTLIAVHPE HHHCCCEEEECCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEEECCC NDPNGFGLDQAKAYAVATGGHKAGVLRSSFVAEVKSDLMGEQTILCGLLQTGSILCFDKM CCCCCCCCCHHCEEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHH VEKGIDAAYASKLIQYGWETITEALKHGGITNMMDRLNNPSKIEAYELAEELKDIMRPLF HHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH QKHQDDIISGEFSRTMMIDWANDDVNLLKWRAATGETNFEKTAPQEAPISEQEYFDNGVL HHHCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHCCCEE MIAMVKAGVELAFETMTEAGIIEESAYYESLHELPLIANTIARKKLFEMNRVISDTAEYG EEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH CYLFDHACKPLLTEFMKKVETNIIGKPFSTSNGVDNTVLIAVNKEIRQHPIEEVGAWLRE HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECHHHHHCCHHHHHHHHHH SMTAMKKIG HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA