| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is acsA [H]
Identifier: 146300608
GI number: 146300608
Start: 3390701
End: 3392611
Strand: Reverse
Name: acsA [H]
Synonym: Fjoh_2859
Alternate gene names: 146300608
Gene position: 3392611-3390701 (Counterclockwise)
Preceding gene: 146300609
Following gene: 146300606
Centisome position: 55.65
GC content: 35.53
Gene sequence:
>1911_bases ATGAGTTATTATAAAATTGAAAATTTAGAACAATATTTTAAACATTACAATAAGTCAATACGAGAGCCGAGAAAATTTTG GGGAAAAATTGCTGAAGAAAATTTTACTTGGTATCAACAGTGGGAAAAAGTTGTTGATTTTAATATGGCCGATGCCGAAG TAAAATGGTTTACAGAAGCAAAGGTTAACATTACCAAAAATTGTATCGACAGACACTTAAGCAAAAGAGGAGATAAAACG GCTATTATTTTTGAGCCGAATGAACCTTCTGAAGAAGCTTTACATATAACATACAACGAGCTTTACGAAAGAGTTTCAAA AATGGCAAATGTTTTGCGTGAACAGGGAATTCGTAAAGGAGACCGCGTGTGCATTTACCTTCCAATGATTCCAGAACTGG CAGTAGCTGTTTTGGCATGTGCCAGAATTGGAGCAATTCACTCAGTGGTTTTTGCAGGATTTTCTGCTTCTGCAGTTTCT GCCAGAATTAACGACTGCGAATGTAAAATGGTTATTACATCAGACGGTGGTTACAGAGGAAATAAAACAATTGATTTAAA AGGAATTGTTGATGAAGCCTTAGATACCTGTCCATCAGTTTCTAAAGTTTTGGTTGTAAAAAGAACTAAAACAGAAATTG CTATGAAAGAAGGCCGTGACATTTGGTTACAGCCATTATTAGATGCAGCTCTTGATAATAGTGTTGCAGAAATTATGGAT GCCGAAGATCCTTTGTTTATTTTATATACATCTGGATCTACAGGAAAACCAAAAGGAATGGTGCATACAACAGCTGGATA CATGGTTTATACAGCTTATACATTCAAAAACGTATTCAGCCACGAAGAAAATGATATCTTTTGGTGTACGGCAGATATTG GATGGATTACAGGACACTCTTATATATTATATGGACCATTGTTAAATGGAGGAACAACTGTAATTTTTGAAGGCGTTCCT TCTTATCCTGATTTCAGCCGTTTTTGGGATATTATCGAAAAACATAAAATCACACAATTTTATACAGCACCAACAGCGAT TCGTTCATTAGCAAAAGAAAGTTTAGATTATATTCAAAAATATCCTCTAAAATCTCTTAAAGTAATTGGATCTGTTGGAG AACCAATCAACGAAGAAGCTTGGCACTGGTTCAACGACCACGTTGGAGACAAGAGATGTCCTGTTGTAGATACTTGGTGG CAGACAGAAACCGGTGGAATTATGATTTCGCCAATTGCTTTTGTTACGCCTACAAAACCAACTTATGCAACTTTACCATT ACCGGGAATTCAGCCGGTTTTAATGGATGAAAAACGCAACGAAATTGAAGGAAATCAAGTAGTTGGAAGTTTATGTATTA AATTTCCATGGCCTGGAATCGCCAGAACAATCTGGAATAATCACGATCGTTATAAAGAAACGTATTTCTCTGCTTTCCCT GGAAAATATTTTACAGGAGACGGTGCATTACGCGATGAAGTAGGATATTACAGAATCACAGGTAGAGTAGATGATGTTGT AATTGTTTCTGGACATAATTTAGGAACTGCTCCAATTGAAGATGCTATCAACGAACATCAAGCGGTTGCCGAATCTGCAA TTGTTGGATTCCCACATGATATTAAAGGAAATGCATTATATGGTTTTGTTATCCTGAAAGAAACCGGAGAAGTTAGAAAT AAAGAAAACTTAACAAAAGAGATCAACCAGTATATTTCTGATCACATTGGACCAATTGCGAAATTAGATAAAATCCAATT TGTTTCTGGCTTGCCAAAAACTCGTTCAGGAAAAATTATGCGTAGAATTTTACGTAAAATTGCTGAAGGTGATTTCTCTA ACTTTGGAGATACAACTACATTATTAAATCCTGAAGTTGTAGAACAGATTATGAAAGAAAGAATTGCATAA
Upstream 100 bases:
>100_bases TTATTTATTATATGTTTTTTTTTTGTCAAAATTTATGAATTAAATAATTTTAAGAATAGAAGCATATTTAATACATTTAT AAAAAAAATTCCACAAAACT
Downstream 100 bases:
>100_bases TTCTCGATAAATAAATAAAAAAGCCTCTTAAAAATTAAGAGGCTTTTTTTATGTTTACAATTTATGCCAGACTGAGCGAA GTCGAAGTCCTGCAAATTGA
Product: acetate--CoA ligase
Products: NA
Alternate protein names: Acetate--CoA ligase; Acyl-activating enzyme [H]
Number of amino acids: Translated: 636; Mature: 635
Protein sequence:
>636_residues MSYYKIENLEQYFKHYNKSIREPRKFWGKIAEENFTWYQQWEKVVDFNMADAEVKWFTEAKVNITKNCIDRHLSKRGDKT AIIFEPNEPSEEALHITYNELYERVSKMANVLREQGIRKGDRVCIYLPMIPELAVAVLACARIGAIHSVVFAGFSASAVS ARINDCECKMVITSDGGYRGNKTIDLKGIVDEALDTCPSVSKVLVVKRTKTEIAMKEGRDIWLQPLLDAALDNSVAEIMD AEDPLFILYTSGSTGKPKGMVHTTAGYMVYTAYTFKNVFSHEENDIFWCTADIGWITGHSYILYGPLLNGGTTVIFEGVP SYPDFSRFWDIIEKHKITQFYTAPTAIRSLAKESLDYIQKYPLKSLKVIGSVGEPINEEAWHWFNDHVGDKRCPVVDTWW QTETGGIMISPIAFVTPTKPTYATLPLPGIQPVLMDEKRNEIEGNQVVGSLCIKFPWPGIARTIWNNHDRYKETYFSAFP GKYFTGDGALRDEVGYYRITGRVDDVVIVSGHNLGTAPIEDAINEHQAVAESAIVGFPHDIKGNALYGFVILKETGEVRN KENLTKEINQYISDHIGPIAKLDKIQFVSGLPKTRSGKIMRRILRKIAEGDFSNFGDTTTLLNPEVVEQIMKERIA
Sequences:
>Translated_636_residues MSYYKIENLEQYFKHYNKSIREPRKFWGKIAEENFTWYQQWEKVVDFNMADAEVKWFTEAKVNITKNCIDRHLSKRGDKT AIIFEPNEPSEEALHITYNELYERVSKMANVLREQGIRKGDRVCIYLPMIPELAVAVLACARIGAIHSVVFAGFSASAVS ARINDCECKMVITSDGGYRGNKTIDLKGIVDEALDTCPSVSKVLVVKRTKTEIAMKEGRDIWLQPLLDAALDNSVAEIMD AEDPLFILYTSGSTGKPKGMVHTTAGYMVYTAYTFKNVFSHEENDIFWCTADIGWITGHSYILYGPLLNGGTTVIFEGVP SYPDFSRFWDIIEKHKITQFYTAPTAIRSLAKESLDYIQKYPLKSLKVIGSVGEPINEEAWHWFNDHVGDKRCPVVDTWW QTETGGIMISPIAFVTPTKPTYATLPLPGIQPVLMDEKRNEIEGNQVVGSLCIKFPWPGIARTIWNNHDRYKETYFSAFP GKYFTGDGALRDEVGYYRITGRVDDVVIVSGHNLGTAPIEDAINEHQAVAESAIVGFPHDIKGNALYGFVILKETGEVRN KENLTKEINQYISDHIGPIAKLDKIQFVSGLPKTRSGKIMRRILRKIAEGDFSNFGDTTTLLNPEVVEQIMKERIA >Mature_635_residues SYYKIENLEQYFKHYNKSIREPRKFWGKIAEENFTWYQQWEKVVDFNMADAEVKWFTEAKVNITKNCIDRHLSKRGDKTA IIFEPNEPSEEALHITYNELYERVSKMANVLREQGIRKGDRVCIYLPMIPELAVAVLACARIGAIHSVVFAGFSASAVSA RINDCECKMVITSDGGYRGNKTIDLKGIVDEALDTCPSVSKVLVVKRTKTEIAMKEGRDIWLQPLLDAALDNSVAEIMDA EDPLFILYTSGSTGKPKGMVHTTAGYMVYTAYTFKNVFSHEENDIFWCTADIGWITGHSYILYGPLLNGGTTVIFEGVPS YPDFSRFWDIIEKHKITQFYTAPTAIRSLAKESLDYIQKYPLKSLKVIGSVGEPINEEAWHWFNDHVGDKRCPVVDTWWQ TETGGIMISPIAFVTPTKPTYATLPLPGIQPVLMDEKRNEIEGNQVVGSLCIKFPWPGIARTIWNNHDRYKETYFSAFPG KYFTGDGALRDEVGYYRITGRVDDVVIVSGHNLGTAPIEDAINEHQAVAESAIVGFPHDIKGNALYGFVILKETGEVRNK ENLTKEINQYISDHIGPIAKLDKIQFVSGLPKTRSGKIMRRILRKIAEGDFSNFGDTTTLLNPEVVEQIMKERIA
Specific function: Enables The Cell To Use Acetate During Aerobic Growth To Generate Energy Via The Tca Cycle, And Biosynthetic Compounds Via The Glyoxylate Shunt. Acetylates Chey, The Response Regulator Involved In Flagellar Movement And Chemotaxis. [C]
COG id: COG0365
COG function: function code I; Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family [H]
Homologues:
Organism=Homo sapiens, GI28416953, Length=620, Percent_Identity=49.5161290322581, Blast_Score=644, Evalue=0.0, Organism=Homo sapiens, GI8923896, Length=662, Percent_Identity=50, Blast_Score=639, Evalue=0.0, Organism=Homo sapiens, GI253970489, Length=675, Percent_Identity=49.1851851851852, Blast_Score=637, Evalue=0.0, Organism=Homo sapiens, GI13375727, Length=637, Percent_Identity=35.9497645211931, Blast_Score=415, Evalue=1e-116, Organism=Homo sapiens, GI42544132, Length=581, Percent_Identity=27.3666092943201, Blast_Score=188, Evalue=2e-47, Organism=Homo sapiens, GI38505220, Length=513, Percent_Identity=28.8499025341131, Blast_Score=182, Evalue=1e-45, Organism=Homo sapiens, GI115511026, Length=522, Percent_Identity=27.2030651340996, Blast_Score=181, Evalue=1e-45, Organism=Homo sapiens, GI31982927, Length=638, Percent_Identity=24.9216300940439, Blast_Score=169, Evalue=1e-41, Organism=Homo sapiens, GI122937307, Length=517, Percent_Identity=27.0793036750484, Blast_Score=168, Evalue=2e-41, Organism=Homo sapiens, GI58082049, Length=605, Percent_Identity=25.7851239669421, Blast_Score=164, Evalue=3e-40, Organism=Homo sapiens, GI157311624, Length=607, Percent_Identity=25.5354200988468, Blast_Score=157, Evalue=3e-38, Organism=Homo sapiens, GI157311622, Length=607, Percent_Identity=25.5354200988468, Blast_Score=157, Evalue=3e-38, Organism=Homo sapiens, GI42544134, Length=350, Percent_Identity=25.4285714285714, Blast_Score=100, Evalue=4e-21, Organism=Homo sapiens, GI195947378, Length=427, Percent_Identity=23.6533957845433, Blast_Score=91, Evalue=3e-18, Organism=Escherichia coli, GI1790505, Length=633, Percent_Identity=52.7646129541864, Blast_Score=673, Evalue=0.0, Organism=Escherichia coli, GI1786529, Length=630, Percent_Identity=37.3015873015873, Blast_Score=411, Evalue=1e-116, Organism=Escherichia coli, GI1788107, Length=556, Percent_Identity=26.7985611510791, Blast_Score=129, Evalue=8e-31, Organism=Escherichia coli, GI145693145, Length=521, Percent_Identity=21.3051823416507, Blast_Score=99, Evalue=8e-22, Organism=Caenorhabditis elegans, GI71983001, Length=648, Percent_Identity=48.3024691358025, Blast_Score=573, Evalue=1e-163, Organism=Caenorhabditis elegans, GI71982997, Length=648, Percent_Identity=48.3024691358025, Blast_Score=572, Evalue=1e-163, Organism=Caenorhabditis elegans, GI17569507, Length=632, Percent_Identity=23.1012658227848, Blast_Score=142, Evalue=4e-34, Organism=Caenorhabditis elegans, GI17557194, Length=579, Percent_Identity=22.6252158894646, Blast_Score=116, Evalue=3e-26, Organism=Caenorhabditis elegans, GI17538037, Length=543, Percent_Identity=23.572744014733, Blast_Score=114, Evalue=1e-25, Organism=Caenorhabditis elegans, GI17558820, Length=514, Percent_Identity=23.9299610894942, Blast_Score=96, Evalue=4e-20, Organism=Caenorhabditis elegans, GI32563687, Length=519, Percent_Identity=22.7360308285164, Blast_Score=92, Evalue=6e-19, Organism=Caenorhabditis elegans, GI17560140, Length=388, Percent_Identity=24.4845360824742, Blast_Score=84, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17531443, Length=548, Percent_Identity=21.8978102189781, Blast_Score=82, Evalue=6e-16, Organism=Caenorhabditis elegans, GI71985884, Length=382, Percent_Identity=21.7277486910995, Blast_Score=77, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6323182, Length=641, Percent_Identity=48.3619344773791, Blast_Score=614, Evalue=1e-176, Organism=Saccharomyces cerevisiae, GI6319264, Length=646, Percent_Identity=46.4396284829721, Blast_Score=575, Evalue=1e-165, Organism=Saccharomyces cerevisiae, GI6319699, Length=368, Percent_Identity=23.3695652173913, Blast_Score=87, Evalue=7e-18, Organism=Drosophila melanogaster, GI24667955, Length=651, Percent_Identity=48.6943164362519, Blast_Score=620, Evalue=1e-178, Organism=Drosophila melanogaster, GI62472339, Length=565, Percent_Identity=51.858407079646, Blast_Score=584, Evalue=1e-167, Organism=Drosophila melanogaster, GI24667959, Length=523, Percent_Identity=51.8164435946463, Blast_Score=540, Evalue=1e-153, Organism=Drosophila melanogaster, GI21355225, Length=625, Percent_Identity=35.36, Blast_Score=362, Evalue=1e-100, Organism=Drosophila melanogaster, GI18859661, Length=537, Percent_Identity=23.2774674115456, Blast_Score=98, Evalue=2e-20, Organism=Drosophila melanogaster, GI21355181, Length=543, Percent_Identity=23.572744014733, Blast_Score=92, Evalue=1e-18, Organism=Drosophila melanogaster, GI45550496, Length=488, Percent_Identity=21.1065573770492, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI45552801, Length=488, Percent_Identity=21.1065573770492, Blast_Score=74, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011904 - InterPro: IPR020845 - InterPro: IPR000873 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.1 [H]
Molecular weight: Translated: 71887; Mature: 71756
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYYKIENLEQYFKHYNKSIREPRKFWGKIAEENFTWYQQWEKVVDFNMADAEVKWFTEA CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEECC KVNITKNCIDRHLSKRGDKTAIIFEPNEPSEEALHITYNELYERVSKMANVLREQGIRKG CEEHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCC DRVCIYLPMIPELAVAVLACARIGAIHSVVFAGFSASAVSARINDCECKMVITSDGGYRG CCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEECCCCEEEEEEECCCCCCC NKTIDLKGIVDEALDTCPSVSKVLVVKRTKTEIAMKEGRDIWLQPLLDAALDNSVAEIMD CEEEEEHHHHHHHHHCCCCCCEEEEEEECHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHC AEDPLFILYTSGSTGKPKGMVHTTAGYMVYTAYTFKNVFSHEENDIFWCTADIGWITGHS CCCCEEEEEECCCCCCCCCEEEECCCEEEEEHHHHHHHHCCCCCCEEEEECCCCEEECCC YILYGPLLNGGTTVIFEGVPSYPDFSRFWDIIEKHKITQFYTAPTAIRSLAKESLDYIQK EEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHCHHHEEECHHHHHHHHHHHHHHHHH YPLKSLKVIGSVGEPINEEAWHWFNDHVGDKRCPVVDTWWQTETGGIMISPIAFVTPTKP CCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCEEECCCCCCCCCEEEECEEEECCCCC TYATLPLPGIQPVLMDEKRNEIEGNQVVGSLCIKFPWPGIARTIWNNHDRYKETYFSAFP CEEECCCCCCCCHHCCCCCCCCCHHHHEEEHEEECCCCHHHHHHHCCCHHHHHHHHHHCC GKYFTGDGALRDEVGYYRITGRVDDVVIVSGHNLGTAPIEDAINEHQAVAESAIVGFPHD CCEEECCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCC IKGNALYGFVILKETGEVRNKENLTKEINQYISDHIGPIAKLDKIQFVSGLPKTRSGKIM CCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHH RRILRKIAEGDFSNFGDTTTLLNPEVVEQIMKERIA HHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHHHCC >Mature Secondary Structure SYYKIENLEQYFKHYNKSIREPRKFWGKIAEENFTWYQQWEKVVDFNMADAEVKWFTEA CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEECC KVNITKNCIDRHLSKRGDKTAIIFEPNEPSEEALHITYNELYERVSKMANVLREQGIRKG CEEHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCC DRVCIYLPMIPELAVAVLACARIGAIHSVVFAGFSASAVSARINDCECKMVITSDGGYRG CCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEECCCCEEEEEEECCCCCCC NKTIDLKGIVDEALDTCPSVSKVLVVKRTKTEIAMKEGRDIWLQPLLDAALDNSVAEIMD CEEEEEHHHHHHHHHCCCCCCEEEEEEECHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHC AEDPLFILYTSGSTGKPKGMVHTTAGYMVYTAYTFKNVFSHEENDIFWCTADIGWITGHS CCCCEEEEEECCCCCCCCCEEEECCCEEEEEHHHHHHHHCCCCCCEEEEECCCCEEECCC YILYGPLLNGGTTVIFEGVPSYPDFSRFWDIIEKHKITQFYTAPTAIRSLAKESLDYIQK EEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHCHHHEEECHHHHHHHHHHHHHHHHH YPLKSLKVIGSVGEPINEEAWHWFNDHVGDKRCPVVDTWWQTETGGIMISPIAFVTPTKP CCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCEEECCCCCCCCCEEEECEEEECCCCC TYATLPLPGIQPVLMDEKRNEIEGNQVVGSLCIKFPWPGIARTIWNNHDRYKETYFSAFP CEEECCCCCCCCHHCCCCCCCCCHHHHEEEHEEECCCCHHHHHHHCCCHHHHHHHHHHCC GKYFTGDGALRDEVGYYRITGRVDDVVIVSGHNLGTAPIEDAINEHQAVAESAIVGFPHD CCEEECCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCC IKGNALYGFVILKETGEVRNKENLTKEINQYISDHIGPIAKLDKIQFVSGLPKTRSGKIM CCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHH RRILRKIAEGDFSNFGDTTTLLNPEVVEQIMKERIA HHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA