| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300583
Identifier: 146300583
GI number: 146300583
Start: 3366250
End: 3367182
Strand: Reverse
Name: 146300583
Synonym: Fjoh_2833
Alternate gene names: NA
Gene position: 3367182-3366250 (Counterclockwise)
Preceding gene: 146300584
Following gene: 146300582
Centisome position: 55.23
GC content: 33.76
Gene sequence:
>933_bases ATGATAAATTTTCCTAAAATTGACCTTCCGCAGTTAAAATCCAAATTACAGGTGAAATCGCCTTGGGACAGGATTATTAT TTCTGTGTTGAGTCTTTTTATTACAATTCCGATATTTATCATTCTGCATCAAAACCTTATAGATTTAGAATGGGCATTCA ATCTCGATCGTGTTTTTATATTCATTTTTGTTTTTGCCGCTATTTTCTTTCTGTTAATGTATCTGCGAACCATAATTATT TTATGTGTTGCGGTTTACTTATTGATTTTATTTTACGGATCAGTTATTGGAAATTATGGTTTTAGTGAGATTTCAGAAGA TTATAATTCGATGATCTATACCATGTCAGACAATCCGTATCCGCAGGATATTGTGGTGGCAAAGCTGCTTCCGTTTCCTA ATAAATCAAAAATTATAAATGCAATTGAATACCAGAACCCCAAAGTCCGAAATTTTGCAATTATGGCCACTTCAAAGCAT TTTAAAGGCATAAAAGGTTATTCTGACTATAGAACGATTATTCAGTGTTTTGCTGTTTTTAAAGAAATCAACGGACGCTG GAATTATGTAAACGATCCTAAAGACGGCGATTATATTGCCACTGCCAGCGAATCATTAGAATATTTTTCAGGAGACTGCG ACGATCATTCTATTTTAATGGCTGCGGCTATTCGTTCTATTGGAGGAACGCCGAGACTTATTCATACAAAAGGTCATATT TATCCTGAAATACTTATTGGATCTATGATCGATCTGGAAAAAGTCAATTATTTAATTAAAAATGTCCTTTTTCAAAAAGA AAGTTATGGTAAAAAAATACATTACCATATCGATGAACGCGGACAAGTCTGGATGAATCTGGATTATACCGCAAAATACC CAGGCGGCCCATTTATGTATGAAGAAATTCTGGGAGCTTTAACACTGAATTAA
Upstream 100 bases:
>100_bases TGTCAAAATTCAAAATCAATTATTTGATCTGGGAATTATTGATAAAAAAAGTACTTTTGTTGAAACGGTAAAAGCGCTGT AAATACTGCTTTTGATTCTT
Downstream 100 bases:
>100_bases TTTTTAGAACTTTATCAACCCTTATTTTTACTAAGATCTTAGAAACCAGATATTTTGTGTTAATAAAATGTTAGGGATAA AACTTTTTTTTGTATCTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: Transglutaminase Domain-Containing Protein
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MINFPKIDLPQLKSKLQVKSPWDRIIISVLSLFITIPIFIILHQNLIDLEWAFNLDRVFIFIFVFAAIFFLLMYLRTIII LCVAVYLLILFYGSVIGNYGFSEISEDYNSMIYTMSDNPYPQDIVVAKLLPFPNKSKIINAIEYQNPKVRNFAIMATSKH FKGIKGYSDYRTIIQCFAVFKEINGRWNYVNDPKDGDYIATASESLEYFSGDCDDHSILMAAAIRSIGGTPRLIHTKGHI YPEILIGSMIDLEKVNYLIKNVLFQKESYGKKIHYHIDERGQVWMNLDYTAKYPGGPFMYEEILGALTLN
Sequences:
>Translated_310_residues MINFPKIDLPQLKSKLQVKSPWDRIIISVLSLFITIPIFIILHQNLIDLEWAFNLDRVFIFIFVFAAIFFLLMYLRTIII LCVAVYLLILFYGSVIGNYGFSEISEDYNSMIYTMSDNPYPQDIVVAKLLPFPNKSKIINAIEYQNPKVRNFAIMATSKH FKGIKGYSDYRTIIQCFAVFKEINGRWNYVNDPKDGDYIATASESLEYFSGDCDDHSILMAAAIRSIGGTPRLIHTKGHI YPEILIGSMIDLEKVNYLIKNVLFQKESYGKKIHYHIDERGQVWMNLDYTAKYPGGPFMYEEILGALTLN >Mature_310_residues MINFPKIDLPQLKSKLQVKSPWDRIIISVLSLFITIPIFIILHQNLIDLEWAFNLDRVFIFIFVFAAIFFLLMYLRTIII LCVAVYLLILFYGSVIGNYGFSEISEDYNSMIYTMSDNPYPQDIVVAKLLPFPNKSKIINAIEYQNPKVRNFAIMATSKH FKGIKGYSDYRTIIQCFAVFKEINGRWNYVNDPKDGDYIATASESLEYFSGDCDDHSILMAAAIRSIGGTPRLIHTKGHI YPEILIGSMIDLEKVNYLIKNVLFQKESYGKKIHYHIDERGQVWMNLDYTAKYPGGPFMYEEILGALTLN
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35756; Mature: 35756
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINFPKIDLPQLKSKLQVKSPWDRIIISVLSLFITIPIFIILHQNLIDLEWAFNLDRVFI CCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHCCHHHHHH FIFVFAAIFFLLMYLRTIIILCVAVYLLILFYGSVIGNYGFSEISEDYNSMIYTMSDNPY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCEEEEECCCCC PQDIVVAKLLPFPNKSKIINAIEYQNPKVRNFAIMATSKHFKGIKGYSDYRTIIQCFAVF CHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEEEECHHHCCCCCHHHHHHHHHHHHHH KEINGRWNYVNDPKDGDYIATASESLEYFSGDCDDHSILMAAAIRSIGGTPRLIHTKGHI HHHCCCCCCCCCCCCCCEEEEHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEECCCCC YPEILIGSMIDLEKVNYLIKNVLFQKESYGKKIHYHIDERGQVWMNLDYTAKYPGGPFMY CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEECEEEECCCCCHHH EEILGALTLN HHHHHHHCCC >Mature Secondary Structure MINFPKIDLPQLKSKLQVKSPWDRIIISVLSLFITIPIFIILHQNLIDLEWAFNLDRVFI CCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHCCHHHHHH FIFVFAAIFFLLMYLRTIIILCVAVYLLILFYGSVIGNYGFSEISEDYNSMIYTMSDNPY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCEEEEECCCCC PQDIVVAKLLPFPNKSKIINAIEYQNPKVRNFAIMATSKHFKGIKGYSDYRTIIQCFAVF CHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEEEECHHHCCCCCHHHHHHHHHHHHHH KEINGRWNYVNDPKDGDYIATASESLEYFSGDCDDHSILMAAAIRSIGGTPRLIHTKGHI HHHCCCCCCCCCCCCCCEEEEHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEECCCCC YPEILIGSMIDLEKVNYLIKNVLFQKESYGKKIHYHIDERGQVWMNLDYTAKYPGGPFMY CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEECEEEECCCCCHHH EEILGALTLN HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA