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The map label for this gene is speA [H]

Identifier: 146300561

GI number: 146300561

Start: 3344854

End: 3346257

Strand: Reverse

Name: speA [H]

Synonym: Fjoh_2811

Alternate gene names: 146300561

Gene position: 3346257-3344854 (Counterclockwise)

Preceding gene: 146300562

Following gene: 146300560

Centisome position: 54.88

GC content: 30.84

Gene sequence:

>1404_bases
ATGAATACAAAATATTCTGATCTAATAAACCAAACATATTATTTCCCGCAAGAAGAGTTTAAACTAAACAAAGACAACTT
ATTGTTTCACAACATCGATTTGATGAAATTGGTAGAACAATATGGAACACCTTTAAAGTTTACTTACCTGCCGCAGATTT
CTGAAAATATCAACAAGGCAAAGTCTTGGTTCAGAAAAGCAATGGAAAAGAATAAATACGAAGCAAAATATTACTATTGT
TACTGTACAAAAAGTTCTCATTTTGAATACATTATGAATGAAGCTTTCAAGAATAATATTCATATTGAAACTTCATCAGC
ATTTGACGTTAATATTGTTGAGAATTTATTAGAAAATGGTAAAATCAACAAAAGTACTTATGTAATTTGTAACGGTTTTA
AAAGAGACGAATACATTTCAAATATTGCAAGATTAATCAATAACGGACATAAAAATACTATTCCTATTATTGATAACTAC
GAAGAACTGGATTTACTACAGGGAGAAATTAAAGGTAAATTCAAAATTGGAATTCGTATTGCAGCTGAAGAAGAACCTAA
ATTTGAGTTTTATACATCAAGATTAGGAATTGGATATAAAAACATTGTTTCTTTTTATAAAAAACAAATTCAGGAAAATG
ATAAATTAGAGCTTAAAATGCTTCACTTTTTCATTAATACCGGAATCAACGATACTTCATATTACTGGAACGAGCTTGTA
AAATGTATTAAAGTATACATTGCACTTAAAAAGGAATGCCCTACTCTTGATGGTTTGAACATTGGGGGCGGTTTTCCAAT
TAAAAACTCGCTTGCATTTGAATATGATTACCAATATATGATTGATGAAATTATCAATCAAATTAAAATTGCCTGTGAAG
AAGCAGAAGTTGATGTGCCAAATATATTTACAGAATTTGGTTCATTTACTGTAGGAGAAAGCGGTGGTGCAATTTATCAG
ATTTTGTATCAAAAGCAGCAAAATGACAGAGAAAAATGGAATATGATCGATTCATCTTTCATCACTACTCTGCCTGATAC
CTGGGCAATTAATAAACGTTTTATCATGCTGGCTATAAACCGCTGGAATGATACTTACGAACGGGTTTTGTTAGGAGGTT
TAACTTGTGATAGTGATGATTATTACAATTCAGAACAAAATATGAACGCAATTTATCTGCCTAAATACAATAAAGAAAAG
CCATTATATATTGGTTTCTTTAATACAGGAGCGTATCAGGAAACTATTGGAGGATACGGAGGATTACACCACTGTTTGAT
TCCGCAGCCAAAACATATTTTAATTGATCGTGACGAAAACGGAATTCTTGCAACAGAGGTTTTCTCTGAGCAGCAGACTT
CTGATGATGTTTTAAAGATTTTAGGCTACAAGAAAAAATTGTAA

Upstream 100 bases:

>100_bases
AAAAACTGCAAATTGTATTTGCCAATATTAGAGTTTGAATTTAAGATTTAGCCGAGATTTTTACTAAATTTAAATAACAA
ATTAAAATATTGAAAACTAA

Downstream 100 bases:

>100_bases
AAAAAATCTGCAAATTAAAAAGTTATTTTCTATAAAATTCTTAATTTGCATATACAGTAAAAAGGTTAAAAACTTTTAAT
TCAAAAAAAACAAAAAAAAC

Product: Orn/DAP/Arg decarboxylase 2

Products: NA

Alternate protein names: ADC [H]

Number of amino acids: Translated: 467; Mature: 467

Protein sequence:

>467_residues
MNTKYSDLINQTYYFPQEEFKLNKDNLLFHNIDLMKLVEQYGTPLKFTYLPQISENINKAKSWFRKAMEKNKYEAKYYYC
YCTKSSHFEYIMNEAFKNNIHIETSSAFDVNIVENLLENGKINKSTYVICNGFKRDEYISNIARLINNGHKNTIPIIDNY
EELDLLQGEIKGKFKIGIRIAAEEEPKFEFYTSRLGIGYKNIVSFYKKQIQENDKLELKMLHFFINTGINDTSYYWNELV
KCIKVYIALKKECPTLDGLNIGGGFPIKNSLAFEYDYQYMIDEIINQIKIACEEAEVDVPNIFTEFGSFTVGESGGAIYQ
ILYQKQQNDREKWNMIDSSFITTLPDTWAINKRFIMLAINRWNDTYERVLLGGLTCDSDDYYNSEQNMNAIYLPKYNKEK
PLYIGFFNTGAYQETIGGYGGLHHCLIPQPKHILIDRDENGILATEVFSEQQTSDDVLKILGYKKKL

Sequences:

>Translated_467_residues
MNTKYSDLINQTYYFPQEEFKLNKDNLLFHNIDLMKLVEQYGTPLKFTYLPQISENINKAKSWFRKAMEKNKYEAKYYYC
YCTKSSHFEYIMNEAFKNNIHIETSSAFDVNIVENLLENGKINKSTYVICNGFKRDEYISNIARLINNGHKNTIPIIDNY
EELDLLQGEIKGKFKIGIRIAAEEEPKFEFYTSRLGIGYKNIVSFYKKQIQENDKLELKMLHFFINTGINDTSYYWNELV
KCIKVYIALKKECPTLDGLNIGGGFPIKNSLAFEYDYQYMIDEIINQIKIACEEAEVDVPNIFTEFGSFTVGESGGAIYQ
ILYQKQQNDREKWNMIDSSFITTLPDTWAINKRFIMLAINRWNDTYERVLLGGLTCDSDDYYNSEQNMNAIYLPKYNKEK
PLYIGFFNTGAYQETIGGYGGLHHCLIPQPKHILIDRDENGILATEVFSEQQTSDDVLKILGYKKKL
>Mature_467_residues
MNTKYSDLINQTYYFPQEEFKLNKDNLLFHNIDLMKLVEQYGTPLKFTYLPQISENINKAKSWFRKAMEKNKYEAKYYYC
YCTKSSHFEYIMNEAFKNNIHIETSSAFDVNIVENLLENGKINKSTYVICNGFKRDEYISNIARLINNGHKNTIPIIDNY
EELDLLQGEIKGKFKIGIRIAAEEEPKFEFYTSRLGIGYKNIVSFYKKQIQENDKLELKMLHFFINTGINDTSYYWNELV
KCIKVYIALKKECPTLDGLNIGGGFPIKNSLAFEYDYQYMIDEIINQIKIACEEAEVDVPNIFTEFGSFTVGESGGAIYQ
ILYQKQQNDREKWNMIDSSFITTLPDTWAINKRFIMLAINRWNDTYERVLLGGLTCDSDDYYNSEQNMNAIYLPKYNKEK
PLYIGFFNTGAYQETIGGYGGLHHCLIPQPKHILIDRDENGILATEVFSEQQTSDDVLKILGYKKKL

Specific function: Catalyzes the biosynthesis of agmatine from arginine [H]

COG id: COG1166

COG function: function code E; Arginine decarboxylase (spermidine biosynthesis)

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009006
- InterPro:   IPR002985
- InterPro:   IPR022643
- InterPro:   IPR022657
- InterPro:   IPR022644
- InterPro:   IPR022653
- InterPro:   IPR000183 [H]

Pfam domain/function: PF02784 Orn_Arg_deC_N; PF00278 Orn_DAP_Arg_deC [H]

EC number: =4.1.1.19 [H]

Molecular weight: Translated: 54547; Mature: 54547

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTKYSDLINQTYYFPQEEFKLNKDNLLFHNIDLMKLVEQYGTPLKFTYLPQISENINKA
CCCHHHHHHHHHCCCCHHHHCCCCCCEEEECCHHHHHHHHHCCCEEEEECCHHHHHHHHH
KSWFRKAMEKNKYEAKYYYCYCTKSSHFEYIMNEAFKNNIHIETSSAFDVNIVENLLENG
HHHHHHHHHCCCCEEEEEEEEEECCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCC
KINKSTYVICNGFKRDEYISNIARLINNGHKNTIPIIDNYEELDLLQGEIKGKFKIGIRI
CCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEE
AAEEEPKFEFYTSRLGIGYKNIVSFYKKQIQENDKLELKMLHFFINTGINDTSYYWNELV
EECCCCCCEEEHHHHCCCHHHHHHHHHHHHCCCCCHHHHEEEHHHHCCCCCHHHHHHHHH
KCIKVYIALKKECPTLDGLNIGGGFPIKNSLAFEYDYQYMIDEIINQIKIACEEAEVDVP
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCH
NIFTEFGSFTVGESGGAIYQILYQKQQNDREKWNMIDSSFITTLPDTWAINKRFIMLAIN
HHHHHHCCEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEE
RWNDTYERVLLGGLTCDSDDYYNSEQNMNAIYLPKYNKEKPLYIGFFNTGAYQETIGGYG
CCCHHHHHHHHCCEEECCCCCCCCCCCCCEEEECCCCCCCCEEEEEECCCCHHHHHCCCC
GLHHCLIPQPKHILIDRDENGILATEVFSEQQTSDDVLKILGYKKKL
CCEEECCCCCCEEEEECCCCCEEEEEHHCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MNTKYSDLINQTYYFPQEEFKLNKDNLLFHNIDLMKLVEQYGTPLKFTYLPQISENINKA
CCCHHHHHHHHHCCCCHHHHCCCCCCEEEECCHHHHHHHHHCCCEEEEECCHHHHHHHHH
KSWFRKAMEKNKYEAKYYYCYCTKSSHFEYIMNEAFKNNIHIETSSAFDVNIVENLLENG
HHHHHHHHHCCCCEEEEEEEEEECCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCC
KINKSTYVICNGFKRDEYISNIARLINNGHKNTIPIIDNYEELDLLQGEIKGKFKIGIRI
CCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEE
AAEEEPKFEFYTSRLGIGYKNIVSFYKKQIQENDKLELKMLHFFINTGINDTSYYWNELV
EECCCCCCEEEHHHHCCCHHHHHHHHHHHHCCCCCHHHHEEEHHHHCCCCCHHHHHHHHH
KCIKVYIALKKECPTLDGLNIGGGFPIKNSLAFEYDYQYMIDEIINQIKIACEEAEVDVP
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCH
NIFTEFGSFTVGESGGAIYQILYQKQQNDREKWNMIDSSFITTLPDTWAINKRFIMLAIN
HHHHHHCCEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEE
RWNDTYERVLLGGLTCDSDDYYNSEQNMNAIYLPKYNKEKPLYIGFFNTGAYQETIGGYG
CCCHHHHHHHHCCEEECCCCCCCCCCCCCEEEECCCCCCCCEEEEEECCCCHHHHHCCCC
GLHHCLIPQPKHILIDRDENGILATEVFSEQQTSDDVLKILGYKKKL
CCEEECCCCCCEEEEECCCCCEEEEEHHCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA