| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300560
Identifier: 146300560
GI number: 146300560
Start: 3343776
End: 3344744
Strand: Reverse
Name: 146300560
Synonym: Fjoh_2810
Alternate gene names: NA
Gene position: 3344744-3343776 (Counterclockwise)
Preceding gene: 146300561
Following gene: 146300559
Centisome position: 54.86
GC content: 35.71
Gene sequence:
>969_bases ATGAAAGGACCAATCAGTCAGTTTATTGAAAAACATTATTTACACTTTAACTCTGCTTCACTTGTGGATGCAGCCAAAGA ATACGAACAACAACTGGCTAATGGCTCAAAAATGTTGGTAAGTATGGCTGGAGCTATGAGTACAGCCGAAATAGGTAAAA TTTTCGCTGAAATAATTAGACAAGATAAAGTACAAATTATTTCATGTACTGGAGCCAATCTAGAAGAAGACATCATGAAT TTAGTAGCTCATTCTCACTACGAAAGAGTTCCTAACTACCGTGATTTGACCCCAGAAGACGAATGGGCTTTACTGGAAAG AGGATTAAATCGTGTTACTGATACTTGTATTCCTGAGCATGAGGCTTTTAGACGTTTACAAAAACATATCTATAAAATCT GGAAAGATGCTGATGATAAGGGAGAACGTTATTTCCCGCATGAATTCATGTACAAAATGTTATTATCAGGAGTTCTTGAA GAATACTACGAAATTGATTTAAAAGACAGCTGGATGTATGCTGCAGCTGAAAAAAACTTACCAATTATTGTTCCTGGATG GGAAGACAGTACAATGGGTAACATCTTTGCTTCTTATGTAATTAAAGGTGACTTAAAAGCATCAACAATGAAATCAGGTA TAGAATACATGACTTTCCTTGCTGACTGGTACTCTAAAAACAGTGCTAACGGAATTGGATTCTTCCAAATTGGAGGTGGT ATTGCTGGAGATTTCCCAATTTGCGTTGTACCAATGTTATATCAGGATATGGAAATGCATGACGTTCCTTTCTGGAGCTA TTTCTGCCAGATTTCAGATTCAACCACTAGTTATGGTTCATATTCTGGAGCAGTTCCAAATGAAAAAATCACATGGGGTA AATTAGACATTAAAACCCCTAAATTTATTATTGAGTCGGATGCTACAATCGTTGCACCATTAATTTTTGCATATTTATTA GATTTATAG
Upstream 100 bases:
>100_bases GCAAATTAAAAAGTTATTTTCTATAAAATTCTTAATTTGCATATACAGTAAAAAGGTTAAAAACTTTTAATTCAAAAAAA ACAAAAAAAACAAAAACAAA
Downstream 100 bases:
>100_bases GATATTTTTATGAAAAGAGTTATAGTAGACTACGCCAAACTGACAAATGAAATTTTAAACCTTTTGGTTGAAAAATTTCC TGATGGTTATGATGATTCGG
Product: deoxyhypusine synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MKGPISQFIEKHYLHFNSASLVDAAKEYEQQLANGSKMLVSMAGAMSTAEIGKIFAEIIRQDKVQIISCTGANLEEDIMN LVAHSHYERVPNYRDLTPEDEWALLERGLNRVTDTCIPEHEAFRRLQKHIYKIWKDADDKGERYFPHEFMYKMLLSGVLE EYYEIDLKDSWMYAAAEKNLPIIVPGWEDSTMGNIFASYVIKGDLKASTMKSGIEYMTFLADWYSKNSANGIGFFQIGGG IAGDFPICVVPMLYQDMEMHDVPFWSYFCQISDSTTSYGSYSGAVPNEKITWGKLDIKTPKFIIESDATIVAPLIFAYLL DL
Sequences:
>Translated_322_residues MKGPISQFIEKHYLHFNSASLVDAAKEYEQQLANGSKMLVSMAGAMSTAEIGKIFAEIIRQDKVQIISCTGANLEEDIMN LVAHSHYERVPNYRDLTPEDEWALLERGLNRVTDTCIPEHEAFRRLQKHIYKIWKDADDKGERYFPHEFMYKMLLSGVLE EYYEIDLKDSWMYAAAEKNLPIIVPGWEDSTMGNIFASYVIKGDLKASTMKSGIEYMTFLADWYSKNSANGIGFFQIGGG IAGDFPICVVPMLYQDMEMHDVPFWSYFCQISDSTTSYGSYSGAVPNEKITWGKLDIKTPKFIIESDATIVAPLIFAYLL DL >Mature_322_residues MKGPISQFIEKHYLHFNSASLVDAAKEYEQQLANGSKMLVSMAGAMSTAEIGKIFAEIIRQDKVQIISCTGANLEEDIMN LVAHSHYERVPNYRDLTPEDEWALLERGLNRVTDTCIPEHEAFRRLQKHIYKIWKDADDKGERYFPHEFMYKMLLSGVLE EYYEIDLKDSWMYAAAEKNLPIIVPGWEDSTMGNIFASYVIKGDLKASTMKSGIEYMTFLADWYSKNSANGIGFFQIGGG IAGDFPICVVPMLYQDMEMHDVPFWSYFCQISDSTTSYGSYSGAVPNEKITWGKLDIKTPKFIIESDATIVAPLIFAYLL DL
Specific function: Unknown
COG id: COG1899
COG function: function code O; Deoxyhypusine synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the deoxyhypusine synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002773 [H]
Pfam domain/function: PF01916 DS [H]
EC number: NA
Molecular weight: Translated: 36618; Mature: 36618
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGPISQFIEKHYLHFNSASLVDAAKEYEQQLANGSKMLVSMAGAMSTAEIGKIFAEIIR CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHH QDKVQIISCTGANLEEDIMNLVAHSHYERVPNYRDLTPEDEWALLERGLNRVTDTCIPEH CCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCH EAFRRLQKHIYKIWKDADDKGERYFPHEFMYKMLLSGVLEEYYEIDLKDSWMYAAAEKNL HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCC PIIVPGWEDSTMGNIFASYVIKGDLKASTMKSGIEYMTFLADWYSKNSANGIGFFQIGGG CEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCC IAGDFPICVVPMLYQDMEMHDVPFWSYFCQISDSTTSYGSYSGAVPNEKITWGKLDIKTP CCCCCHHHHHHHHHCCCHHCCCCHHHHHEEECCCCCCCCCCCCCCCCCCEEECEEECCCC KFIIESDATIVAPLIFAYLLDL CEEEECCCHHHHHHHHHHHHCC >Mature Secondary Structure MKGPISQFIEKHYLHFNSASLVDAAKEYEQQLANGSKMLVSMAGAMSTAEIGKIFAEIIR CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHH QDKVQIISCTGANLEEDIMNLVAHSHYERVPNYRDLTPEDEWALLERGLNRVTDTCIPEH CCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCH EAFRRLQKHIYKIWKDADDKGERYFPHEFMYKMLLSGVLEEYYEIDLKDSWMYAAAEKNL HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCC PIIVPGWEDSTMGNIFASYVIKGDLKASTMKSGIEYMTFLADWYSKNSANGIGFFQIGGG CEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCC IAGDFPICVVPMLYQDMEMHDVPFWSYFCQISDSTTSYGSYSGAVPNEKITWGKLDIKTP CCCCCHHHHHHHHHCCCHHCCCCHHHHHEEECCCCCCCCCCCCCCCCCCEEECEEECCCC KFIIESDATIVAPLIFAYLLDL CEEEECCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA