| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
Click here to switch to the map view.
The map label for this gene is 146300514
Identifier: 146300514
GI number: 146300514
Start: 3298289
End: 3298816
Strand: Reverse
Name: 146300514
Synonym: Fjoh_2764
Alternate gene names: NA
Gene position: 3298816-3298289 (Counterclockwise)
Preceding gene: 146300516
Following gene: 146300513
Centisome position: 54.11
GC content: 28.98
Gene sequence:
>528_bases ATGAAAAATCTACCTAAAAAAGTAAGAAGCAAAAAATTAAGTTCAAGAGTTGATTTAACCGCAATGGTCAGCGTTTCCTT TTTGCTGATTATATTTTTTATGGTTGTTGGAGAATTGTCTAAAGCTAAAATTATGAATTTGAGTCTGCCACATAATAATG AAGGAAGAATCTCTTGCGGAACAATACGAGAAGGAGAATATAGATCAATAACAGTAATTTTAGATGATAATAATAGATTG ATATATTACATGGGATTAGTGAGCTCTCCCATTATAGCTCCAAAAGAAATTCAATACGGTAAAGAAGGAATACGCAAAGA ATTGTTAAGCAGAAAACAAAATATCCTTAATTATTCTTCTAAAAATGTGAGACCCGAAAATCTCATTGTAATTATAAAAC CAAGTAAAAAATCTAATTTTAAAAACCTAGTTGATATATTAGATGAAATGGCTATTGCAGAAATAAGTACTTATGCTATT GTCCCAGAATTTACACCCGAAGAATCTAAATTATTAGCTTCAAAATAA
Upstream 100 bases:
>100_bases CAAAGACTTAATGCTCAAATAATTTTTTAATTATTTTTAAATTTGATCATGGTGGTATGTTAAATTTATTTTTAACTTTA GTAAATAAATTCATTATTTT
Downstream 100 bases:
>100_bases CTCCTTTTACTAAACTAGAATCTATGAAAAATCTACCACAAAAAGTCAGAAGTAAAAAATTAAGTTCTAGAATTGATTTA ACCGCAATGGTCAGCGTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: Biopolymer Transport ExbD Protein; Transport Energizing Protein ExbD/lR Family
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MKNLPKKVRSKKLSSRVDLTAMVSVSFLLIIFFMVVGELSKAKIMNLSLPHNNEGRISCGTIREGEYRSITVILDDNNRL IYYMGLVSSPIIAPKEIQYGKEGIRKELLSRKQNILNYSSKNVRPENLIVIIKPSKKSNFKNLVDILDEMAIAEISTYAI VPEFTPEESKLLASK
Sequences:
>Translated_175_residues MKNLPKKVRSKKLSSRVDLTAMVSVSFLLIIFFMVVGELSKAKIMNLSLPHNNEGRISCGTIREGEYRSITVILDDNNRL IYYMGLVSSPIIAPKEIQYGKEGIRKELLSRKQNILNYSSKNVRPENLIVIIKPSKKSNFKNLVDILDEMAIAEISTYAI VPEFTPEESKLLASK >Mature_175_residues MKNLPKKVRSKKLSSRVDLTAMVSVSFLLIIFFMVVGELSKAKIMNLSLPHNNEGRISCGTIREGEYRSITVILDDNNRL IYYMGLVSSPIIAPKEIQYGKEGIRKELLSRKQNILNYSSKNVRPENLIVIIKPSKKSNFKNLVDILDEMAIAEISTYAI VPEFTPEESKLLASK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19790; Mature: 19790
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNLPKKVRSKKLSSRVDLTAMVSVSFLLIIFFMVVGELSKAKIMNLSLPHNNEGRISCG CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEC TIREGEYRSITVILDDNNRLIYYMGLVSSPIIAPKEIQYGKEGIRKELLSRKQNILNYSS CCCCCCCEEEEEEEECCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC KNVRPENLIVIIKPSKKSNFKNLVDILDEMAIAEISTYAIVPEFTPEESKLLASK CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHCCCC >Mature Secondary Structure MKNLPKKVRSKKLSSRVDLTAMVSVSFLLIIFFMVVGELSKAKIMNLSLPHNNEGRISCG CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEC TIREGEYRSITVILDDNNRLIYYMGLVSSPIIAPKEIQYGKEGIRKELLSRKQNILNYSS CCCCCCCEEEEEEEECCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC KNVRPENLIVIIKPSKKSNFKNLVDILDEMAIAEISTYAIVPEFTPEESKLLASK CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA