| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300499
Identifier: 146300499
GI number: 146300499
Start: 3281846
End: 3282568
Strand: Reverse
Name: 146300499
Synonym: Fjoh_2749
Alternate gene names: NA
Gene position: 3282568-3281846 (Counterclockwise)
Preceding gene: 146300500
Following gene: 146300494
Centisome position: 53.84
GC content: 33.33
Gene sequence:
>723_bases ATGAAAAAATCAATTTTACTTTTAGCACTAAGTGTATGTTTTATTACAGCAAAGTCTAATGCACAAACTAAAATAAACGG AAACGGAAACGTTGTAACGCAAACCAGAACAACCGGAGATTATGATGGTGTTAGAATTGCAGGTTTCTTTGATGTTGATT TAGTTTCTGGAAAAGAAGGAAAAATTATTATTAAAGGAGAAGAAAATCTGCTTCAGGCAATTAAAGTAGAAGTTGAAGGA AACGAATTAAAAGTTTATGTTGAAAAAGGAACTCAAATTCGCACCAGTTCTGGAAAAAAAATCGAAATAACGGTTCCTTT TGAAAAAATTTCAGCGGTAACCTTATCAGGTTCAGGTGATGTTAGGACTAAAAACAAAATTAACAGCGATGCATTTTCTG CTAAGTTATCAGGATCTGGAAATTTTGATTTAGATGTTGATTCTAATAATTTTGATCTGGCTCTAAGCGGTTCCGGCGAT ATTGTTTTAAAAGGAAAAACAGATTCTTTTACCAGCAAAATATCGGGTTCCGGAAATGTTAATGCCTCTAATTTAAAATC AAAAACGGCAGACGTAACAGTTTCTGGTTCCGGAAATAGTGTAGTAAGCTGTGAAACAAGTTTAACAGGAAGAGTTTCCG GTTCTGGAAATATTAAATATTTAGGAAATCCAGAGAAACGCGATGTAAAAGTTTCGGGTTCTGGAAAAATTTATAAAGGT TGA
Upstream 100 bases:
>100_bases GCGGTTTCTATAAGAAAAAAGGACAAAACAAAGTCAATATTACTTCGGCTTATGGAAATATTTCACTAGCAAAAAATTAA TCATCTAAAAAATCAAAACA
Downstream 100 bases:
>100_bases TTATTTAAATGAAATATCACGAATTACAAAAAAATCATCAATCAAATAATTTCATGTAATTCGTGATATTGGTTGTTATT AAAGACGTTTCGATTAGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MKKSILLLALSVCFITAKSNAQTKINGNGNVVTQTRTTGDYDGVRIAGFFDVDLVSGKEGKIIIKGEENLLQAIKVEVEG NELKVYVEKGTQIRTSSGKKIEITVPFEKISAVTLSGSGDVRTKNKINSDAFSAKLSGSGNFDLDVDSNNFDLALSGSGD IVLKGKTDSFTSKISGSGNVNASNLKSKTADVTVSGSGNSVVSCETSLTGRVSGSGNIKYLGNPEKRDVKVSGSGKIYKG
Sequences:
>Translated_240_residues MKKSILLLALSVCFITAKSNAQTKINGNGNVVTQTRTTGDYDGVRIAGFFDVDLVSGKEGKIIIKGEENLLQAIKVEVEG NELKVYVEKGTQIRTSSGKKIEITVPFEKISAVTLSGSGDVRTKNKINSDAFSAKLSGSGNFDLDVDSNNFDLALSGSGD IVLKGKTDSFTSKISGSGNVNASNLKSKTADVTVSGSGNSVVSCETSLTGRVSGSGNIKYLGNPEKRDVKVSGSGKIYKG >Mature_240_residues MKKSILLLALSVCFITAKSNAQTKINGNGNVVTQTRTTGDYDGVRIAGFFDVDLVSGKEGKIIIKGEENLLQAIKVEVEG NELKVYVEKGTQIRTSSGKKIEITVPFEKISAVTLSGSGDVRTKNKINSDAFSAKLSGSGNFDLDVDSNNFDLALSGSGD IVLKGKTDSFTSKISGSGNVNASNLKSKTADVTVSGSGNSVVSCETSLTGRVSGSGNIKYLGNPEKRDVKVSGSGKIYKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25116; Mature: 25116
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSILLLALSVCFITAKSNAQTKINGNGNVVTQTRTTGDYDGVRIAGFFDVDLVSGKEG CCCCEEEEEEEEEEEEECCCCEEEECCCCCEEEEEECCCCCCCEEEEEEEEEEEECCCCC KIIIKGEENLLQAIKVEVEGNELKVYVEKGTQIRTSSGKKIEITVPFEKISAVTLSGSGD EEEEECCHHEEEEEEEEEECCEEEEEEECCCEEEECCCCEEEEEECHHHEEEEEEECCCC VRTKNKINSDAFSAKLSGSGNFDLDVDSNNFDLALSGSGDIVLKGKTDSFTSKISGSGNV EEECCCCCCCCEEEEECCCCCEEEEECCCCEEEEECCCCCEEEEECCCCHHEECCCCCCC NASNLKSKTADVTVSGSGNSVVSCETSLTGRVSGSGNIKYLGNPEKRDVKVSGSGKIYKG CHHHCCCCCEEEEEECCCCEEEEEECCEEEEECCCCCEEECCCCCCCEEEECCCCEEECC >Mature Secondary Structure MKKSILLLALSVCFITAKSNAQTKINGNGNVVTQTRTTGDYDGVRIAGFFDVDLVSGKEG CCCCEEEEEEEEEEEEECCCCEEEECCCCCEEEEEECCCCCCCEEEEEEEEEEEECCCCC KIIIKGEENLLQAIKVEVEGNELKVYVEKGTQIRTSSGKKIEITVPFEKISAVTLSGSGD EEEEECCHHEEEEEEEEEECCEEEEEEECCCEEEECCCCEEEEEECHHHEEEEEEECCCC VRTKNKINSDAFSAKLSGSGNFDLDVDSNNFDLALSGSGDIVLKGKTDSFTSKISGSGNV EEECCCCCCCCEEEEECCCCCEEEEECCCCEEEEECCCCCEEEEECCCCHHEECCCCCCC NASNLKSKTADVTVSGSGNSVVSCETSLTGRVSGSGNIKYLGNPEKRDVKVSGSGKIYKG CHHHCCCCCEEEEEECCCCEEEEEECCEEEEECCCCCEEECCCCCCCEEEECCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA