| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is ydzA [H]
Identifier: 146300304
GI number: 146300304
Start: 3033581
End: 3033892
Strand: Direct
Name: ydzA [H]
Synonym: Fjoh_2549
Alternate gene names: 146300304
Gene position: 3033581-3033892 (Clockwise)
Preceding gene: 146300303
Following gene: 146300305
Centisome position: 49.76
GC content: 31.41
Gene sequence:
>312_bases ATGAAAAATTTATTAAATACAAATACCGGACGATTACGAATTATTGGTTTCCTTGAAGGAACATCACTTTTAATTCTGCT TTTTATTGCAATGCCAATGAAATATGTTTTTGAAATGCCATTTTTAACGAGACCTGTTGGGACAATTCATGGCGCTTTAT TTCTGCTTTTTGTTTTTAACACTTTAAGTGTTGGAGTAGAGCAGAACTGGAAATTTAAGGACACAACCTGGAAAGTACTT TTGGCCTGTGTAATTCCATTTGGTACTTTTTACATCGATTCTAAGATTTTAAGTAAAATTCAAAACCATTAA
Upstream 100 bases:
>100_bases GAACCATGTTTTTGTGGTTTTCAATTGCTTTGATAATTATTTTTATTGCCATTCCGTGGCCATTTTCTCCTCTTGCAAGC CGACCTTATTTTAGATAATT
Downstream 100 bases:
>100_bases AATTTATGATTTTTGTATTCAAAACAAACGTTGACAGCATTTCGAAAGTAAAGAAAGTTACCCCAAAACTGAATCGGTTA TTTCCCAATTCAAAATGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 103; Mature: 103
Protein sequence:
>103_residues MKNLLNTNTGRLRIIGFLEGTSLLILLFIAMPMKYVFEMPFLTRPVGTIHGALFLLFVFNTLSVGVEQNWKFKDTTWKVL LACVIPFGTFYIDSKILSKIQNH
Sequences:
>Translated_103_residues MKNLLNTNTGRLRIIGFLEGTSLLILLFIAMPMKYVFEMPFLTRPVGTIHGALFLLFVFNTLSVGVEQNWKFKDTTWKVL LACVIPFGTFYIDSKILSKIQNH >Mature_103_residues MKNLLNTNTGRLRIIGFLEGTSLLILLFIAMPMKYVFEMPFLTRPVGTIHGALFLLFVFNTLSVGVEQNWKFKDTTWKVL LACVIPFGTFYIDSKILSKIQNH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11797; Mature: 11797
Theoretical pI: Translated: 10.33; Mature: 10.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNLLNTNTGRLRIIGFLEGTSLLILLFIAMPMKYVFEMPFLTRPVGTIHGALFLLFVFN CCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH TLSVGVEQNWKFKDTTWKVLLACVIPFGTFYIDSKILSKIQNH HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKNLLNTNTGRLRIIGFLEGTSLLILLFIAMPMKYVFEMPFLTRPVGTIHGALFLLFVFN CCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH TLSVGVEQNWKFKDTTWKVLLACVIPFGTFYIDSKILSKIQNH HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]