| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is bcp [H]
Identifier: 146300195
GI number: 146300195
Start: 2925112
End: 2925564
Strand: Direct
Name: bcp [H]
Synonym: Fjoh_2440
Alternate gene names: 146300195
Gene position: 2925112-2925564 (Clockwise)
Preceding gene: 146300194
Following gene: 146300197
Centisome position: 47.98
GC content: 35.32
Gene sequence:
>453_bases ATGACAACATTAAAAGCCGGAGATAAAGCACCAAACTTTTCAGGAACAGATCAAGACGGAAAAACACATAAACTAGCAGA TTATGCTGGAAAAAAACTTGTAGTATTTTTTTATCCAAAAGCAAGCACACCCGGATGTACAGCCGAAGCCTGCGATTTGA GAGATAACTTTGAGCGCTTTAAAGCAAATAATTACGAACTTTTGGGAGTAAGTGCAGACAGCCAGAAAGCACAGTCAAAA TTTAAAGACAAATATGAATTTCCTTTTCCATTAATTGCAGATGAAGATAAAGCTGTTATTAATGCTTTTGGAGTTTGGGG ACCAAAGAAGTTTATGGGAAAAGAATACGACGGAATTCACAGAACTACTTTTGTAATCGATGAAAAAGGAATCATCGAAG AAGTAATTGAAAAAGTAAAAACAAAAGAACACGCTTCGCAGATTTTGAAATAG
Upstream 100 bases:
>100_bases TTGTTTGAACCTGATGACAAAACAAAACTAGTATTACATAAATTTGAAATCGAAAGTTAATAAAACCTAAAATCAACAAT CTAAAACCTAAAATAAAAAT
Downstream 100 bases:
>100_bases AGTTTTTTTGTTTCAAGTTTCATGTTTCAAGTTGTTTTACTTAACGCTTAGTTTTACCGCAAAGCACGCTAAGTTTTTTT GCTTGAGCTTGAGCTGAAAC
Product: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
Products: NA
Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MTTLKAGDKAPNFSGTDQDGKTHKLADYAGKKLVVFFYPKASTPGCTAEACDLRDNFERFKANNYELLGVSADSQKAQSK FKDKYEFPFPLIADEDKAVINAFGVWGPKKFMGKEYDGIHRTTFVIDEKGIIEEVIEKVKTKEHASQILK
Sequences:
>Translated_150_residues MTTLKAGDKAPNFSGTDQDGKTHKLADYAGKKLVVFFYPKASTPGCTAEACDLRDNFERFKANNYELLGVSADSQKAQSK FKDKYEFPFPLIADEDKAVINAFGVWGPKKFMGKEYDGIHRTTFVIDEKGIIEEVIEKVKTKEHASQILK >Mature_149_residues TTLKAGDKAPNFSGTDQDGKTHKLADYAGKKLVVFFYPKASTPGCTAEACDLRDNFERFKANNYELLGVSADSQKAQSKF KDKYEFPFPLIADEDKAVINAFGVWGPKKFMGKEYDGIHRTTFVIDEKGIIEEVIEKVKTKEHASQILK
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1788825, Length=149, Percent_Identity=50.3355704697987, Blast_Score=159, Evalue=5e-41, Organism=Saccharomyces cerevisiae, GI6322180, Length=112, Percent_Identity=38.3928571428571, Blast_Score=77, Evalue=1e-15,
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 16805; Mature: 16674
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLKAGDKAPNFSGTDQDGKTHKLADYAGKKLVVFFYPKASTPGCTAEACDLRDNFERF CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEEEECCCCCCCCCHHHHCCHHHHHHH KANNYELLGVSADSQKAQSKFKDKYEFPFPLIADEDKAVINAFGVWGPKKFMGKEYDGIH CCCCEEEEEECCCHHHHHHHHHHCCCCCCCEEECCCCCEEHHHCCCCCHHHCCCCCCCCE RTTFVIDEKGIIEEVIEKVKTKEHASQILK EEEEEECCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TTLKAGDKAPNFSGTDQDGKTHKLADYAGKKLVVFFYPKASTPGCTAEACDLRDNFERF CCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEEEECCCCCCCCCHHHHCCHHHHHHH KANNYELLGVSADSQKAQSKFKDKYEFPFPLIADEDKAVINAFGVWGPKKFMGKEYDGIH CCCCEEEEEECCCHHHHHHHHHHCCCCCCCEEECCCCCEEHHHCCCCCHHHCCCCCCCCE RTTFVIDEKGIIEEVIEKVKTKEHASQILK EEEEEECCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]