| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
Click here to switch to the map view.
The map label for this gene is bglA [H]
Identifier: 146300189
GI number: 146300189
Start: 2918659
End: 2920329
Strand: Direct
Name: bglA [H]
Synonym: Fjoh_2434
Alternate gene names: 146300189
Gene position: 2918659-2920329 (Clockwise)
Preceding gene: 146300188
Following gene: 146300190
Centisome position: 47.87
GC content: 38.78
Gene sequence:
>1671_bases ATGAGCAAGAAATTAATTATAAAGATAGTATCCCTATTTACGATTCTCTTGATGACGGGTTGTCAGAAAGACGATTTTAC ATTCGGATCAATAACTACACCATCTAATTTAAAGGTAACAGCCGAAATTGTTGGTAAAACAGCTGATGCTCCTTATGGAG ACGGATCTGGAATAGTAAAGTTTGCTGCAACAGCAGATAATGCTATTTCGTATAAATATGTTTATCCAGACGGGACTTCT GATAATGCTCCAAGCGGAAAAATCTCTAAAAGATTTACCAAAACAGGAGTTAACACCTATACCGTAACTATTGTTGCAAC AGGAGCAGGAGGAGTAGCAACAAATACAACAATCGATGTTGAAGTAAAAAGTGATTTTAGCGACGATCAGGCCGTTCAAT TGCTTACAGGCGGATCTTCTAAAAAATGGTATTGGGCTGCCGGAGAACCAGGACATCTTGGTGTAGGTCAGAACGATGGC GATGCAGAGAAAAACTTCTTCCCTAATTACTACAGTGCAGGAGCATTTGAAAAAGCAAATTCACCAAACAGCAGCTGTTT ATACGATAACGTATTGACATTCTCTCTTGATGGGGATCAGCTTAAATTCCAATTAGATAACGGCGGAGCAACATTCTTCA ATAAAGATTTTGGAAGCGTTGCAGGAGCATCTGGTTTATCAGAAGACATGTGTTTAAGCTATAACACTGGTGCTGCAAAA ACAGTTTCATTAAGTCCTTCTGAATCTGTAATAATGAATAATCCAAAACATGCAGAGCAGACAAGAGGTACAACAATGAA CTTCTCTGACAATGGATTTATGGGGTACTATATTGGTCAAAATTCTTATGAGATTTTATCACTTACTGCTAACCGTATGG TTGTAAGAGCAGTAATGGGCGGAAATCCGGCATTGGCATGGTACCATACCTTTACAACTACGCCTCCAAATCAAAATCCA AATCCATCAACGGATTATACAAACCTTGTATGGCAGGACGAATTTAATACAGACGGAGCGCCAGATCCTGCAAAATGGGT TTATGATTTAGGAAGAGGCGATAACGGCTGGGGAAATAATGAAAAACAAAATTATACCAGTTCAGCTTCAAACATAAAAG TACAAGGCGGAAGCTTAATTATTACAGCTAAAAAAGAAGCTTCCGGCGGAGCAGATTATTCTTCGGCAAGACTTAAATCA GATGGAAAATATTCTTTTACATATGGTAAAGTTGAGGTTAGAGCAAAACTTCCTTCTGGCGGCGGAACCTGGCCGGCTAT CTGGATGCTTGGGCAGAATTATGCAACAAAACCATGGCCTGCCTGCGGAGAAATTGATATTATGGAACACGTAGGAAACA ATCAGAACGTGATTCACGGTACATTTCATTATCCGGCACGTTTTGGCGGAAACGCAGATACAGCATCGAAAACAATTCCA AATGTATCTACAGAGTTTCATGTTTATAAAACAATCTGGAGTCCGGAATCTATCTCAATTTATGTTGATGATACACTGAT TCATACACTGGCAAATACTGCATCATTACCTTTTAACAGCAGCTTTTTCTTGATTTTAAATGTTGCAATGGGAGGTAATT TAGGAGGAGCTATTGATGGTGCTTTTTCACAATCTTCTATGGAGGTTGATTATGTTAGAGTATATCAATAA
Upstream 100 bases:
>100_bases AATACGACAGAGTAATTCTATTCCCTGATTTTGGTAAAAACGGACTAGGAGAAACGTATTACTTTGATGATATAAAACAA TCCAATTAAAACAAGAAATC
Downstream 100 bases:
>100_bases GTTGAGTTAATTAATTAGTAATTCTGAGAAGGTCAGTTTCGGCTGGCCTTCTTAATTAAAAAAAGAATATGAATAAAATA GTTTTACTGCTGTTAATCTG
Product: glycoside hydrolase family protein
Products: NA
Alternate protein names: 1,3-1,4-beta-D-glucan 4-glucanohydrolase; Endo-beta-1,3-1,4 glucanase; Lichenase [H]
Number of amino acids: Translated: 556; Mature: 555
Protein sequence:
>556_residues MSKKLIIKIVSLFTILLMTGCQKDDFTFGSITTPSNLKVTAEIVGKTADAPYGDGSGIVKFAATADNAISYKYVYPDGTS DNAPSGKISKRFTKTGVNTYTVTIVATGAGGVATNTTIDVEVKSDFSDDQAVQLLTGGSSKKWYWAAGEPGHLGVGQNDG DAEKNFFPNYYSAGAFEKANSPNSSCLYDNVLTFSLDGDQLKFQLDNGGATFFNKDFGSVAGASGLSEDMCLSYNTGAAK TVSLSPSESVIMNNPKHAEQTRGTTMNFSDNGFMGYYIGQNSYEILSLTANRMVVRAVMGGNPALAWYHTFTTTPPNQNP NPSTDYTNLVWQDEFNTDGAPDPAKWVYDLGRGDNGWGNNEKQNYTSSASNIKVQGGSLIITAKKEASGGADYSSARLKS DGKYSFTYGKVEVRAKLPSGGGTWPAIWMLGQNYATKPWPACGEIDIMEHVGNNQNVIHGTFHYPARFGGNADTASKTIP NVSTEFHVYKTIWSPESISIYVDDTLIHTLANTASLPFNSSFFLILNVAMGGNLGGAIDGAFSQSSMEVDYVRVYQ
Sequences:
>Translated_556_residues MSKKLIIKIVSLFTILLMTGCQKDDFTFGSITTPSNLKVTAEIVGKTADAPYGDGSGIVKFAATADNAISYKYVYPDGTS DNAPSGKISKRFTKTGVNTYTVTIVATGAGGVATNTTIDVEVKSDFSDDQAVQLLTGGSSKKWYWAAGEPGHLGVGQNDG DAEKNFFPNYYSAGAFEKANSPNSSCLYDNVLTFSLDGDQLKFQLDNGGATFFNKDFGSVAGASGLSEDMCLSYNTGAAK TVSLSPSESVIMNNPKHAEQTRGTTMNFSDNGFMGYYIGQNSYEILSLTANRMVVRAVMGGNPALAWYHTFTTTPPNQNP NPSTDYTNLVWQDEFNTDGAPDPAKWVYDLGRGDNGWGNNEKQNYTSSASNIKVQGGSLIITAKKEASGGADYSSARLKS DGKYSFTYGKVEVRAKLPSGGGTWPAIWMLGQNYATKPWPACGEIDIMEHVGNNQNVIHGTFHYPARFGGNADTASKTIP NVSTEFHVYKTIWSPESISIYVDDTLIHTLANTASLPFNSSFFLILNVAMGGNLGGAIDGAFSQSSMEVDYVRVYQ >Mature_555_residues SKKLIIKIVSLFTILLMTGCQKDDFTFGSITTPSNLKVTAEIVGKTADAPYGDGSGIVKFAATADNAISYKYVYPDGTSD NAPSGKISKRFTKTGVNTYTVTIVATGAGGVATNTTIDVEVKSDFSDDQAVQLLTGGSSKKWYWAAGEPGHLGVGQNDGD AEKNFFPNYYSAGAFEKANSPNSSCLYDNVLTFSLDGDQLKFQLDNGGATFFNKDFGSVAGASGLSEDMCLSYNTGAAKT VSLSPSESVIMNNPKHAEQTRGTTMNFSDNGFMGYYIGQNSYEILSLTANRMVVRAVMGGNPALAWYHTFTTTPPNQNPN PSTDYTNLVWQDEFNTDGAPDPAKWVYDLGRGDNGWGNNEKQNYTSSASNIKVQGGSLIITAKKEASGGADYSSARLKSD GKYSFTYGKVEVRAKLPSGGGTWPAIWMLGQNYATKPWPACGEIDIMEHVGNNQNVIHGTFHYPARFGGNADTASKTIPN VSTEFHVYKTIWSPESISIYVDDTLIHTLANTASLPFNSSFFLILNVAMGGNLGGAIDGAFSQSSMEVDYVRVYQ
Specific function: Shows activity on lichenan, beta-glucan and laminarin but not on CMC cellulose or xylan [H]
COG id: COG2273
COG function: function code G; Beta-glucanase/Beta-glucan synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 16 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008985 - InterPro: IPR013320 - InterPro: IPR000757 - InterPro: IPR008263 [H]
Pfam domain/function: PF00722 Glyco_hydro_16 [H]
EC number: =3.2.1.73 [H]
Molecular weight: Translated: 59727; Mature: 59595
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00284 SERPIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKLIIKIVSLFTILLMTGCQKDDFTFGSITTPSNLKVTAEIVGKTADAPYGDGSGIVK CCCHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCEEEEEEECCCCCCCCCCCCCEEE FAATADNAISYKYVYPDGTSDNAPSGKISKRFTKTGVNTYTVTIVATGAGGVATNTTIDV EEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHCCCCEEEEEEEEECCCCCCCCCEEEE EVKSDFSDDQAVQLLTGGSSKKWYWAAGEPGHLGVGQNDGDAEKNFFPNYYSAGAFEKAN EECCCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SPNSSCLYDNVLTFSLDGDQLKFQLDNGGATFFNKDFGSVAGASGLSEDMCLSYNTGAAK CCCCCEEECCEEEEEECCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCEE TVSLSPSESVIMNNPKHAEQTRGTTMNFSDNGFMGYYIGQNSYEILSLTANRMVVRAVMG EEEECCCCCEEECCCCHHHHHCCCEEEECCCCEEEEEECCCCEEEEEEECCEEEEEEEEC GNPALAWYHTFTTTPPNQNPNPSTDYTNLVWQDEFNTDGAPDPAKWVYDLGRGDNGWGNN CCCEEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHEECCCCCCCCCCC EKQNYTSSASNIKVQGGSLIITAKKEASGGADYSSARLKSDGKYSFTYGKVEVRAKLPSG CCCCCCCCCCEEEEECCEEEEEEECCCCCCCCCCCCEECCCCCEEEEEEEEEEEEECCCC GGTWPAIWMLGQNYATKPWPACGEIDIMEHVGNNQNVIHGTFHYPARFGGNADTASKTIP CCCCEEEEEECCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHCCC NVSTEFHVYKTIWSPESISIYVDDTLIHTLANTASLPFNSSFFLILNVAMGGNLGGAIDG CCCCEEEEEEEECCCCEEEEEECHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCC AFSQSSMEVDYVRVYQ CCCCCCCEEEEEEEEC >Mature Secondary Structure SKKLIIKIVSLFTILLMTGCQKDDFTFGSITTPSNLKVTAEIVGKTADAPYGDGSGIVK CCHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCEEEEEEECCCCCCCCCCCCCEEE FAATADNAISYKYVYPDGTSDNAPSGKISKRFTKTGVNTYTVTIVATGAGGVATNTTIDV EEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHCCCCEEEEEEEEECCCCCCCCCEEEE EVKSDFSDDQAVQLLTGGSSKKWYWAAGEPGHLGVGQNDGDAEKNFFPNYYSAGAFEKAN EECCCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SPNSSCLYDNVLTFSLDGDQLKFQLDNGGATFFNKDFGSVAGASGLSEDMCLSYNTGAAK CCCCCEEECCEEEEEECCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCEE TVSLSPSESVIMNNPKHAEQTRGTTMNFSDNGFMGYYIGQNSYEILSLTANRMVVRAVMG EEEECCCCCEEECCCCHHHHHCCCEEEECCCCEEEEEECCCCEEEEEEECCEEEEEEEEC GNPALAWYHTFTTTPPNQNPNPSTDYTNLVWQDEFNTDGAPDPAKWVYDLGRGDNGWGNN CCCEEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHEECCCCCCCCCCC EKQNYTSSASNIKVQGGSLIITAKKEASGGADYSSARLKSDGKYSFTYGKVEVRAKLPSG CCCCCCCCCCEEEEECCEEEEEEECCCCCCCCCCCCEECCCCCEEEEEEEEEEEEECCCC GGTWPAIWMLGQNYATKPWPACGEIDIMEHVGNNQNVIHGTFHYPARFGGNADTASKTIP CCCCEEEEEECCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHCCC NVSTEFHVYKTIWSPESISIYVDDTLIHTLANTASLPFNSSFFLILNVAMGGNLGGAIDG CCCCEEEEEEEECCCCEEEEEECHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCC AFSQSSMEVDYVRVYQ CCCCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7925416 [H]