| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is azu [H]
Identifier: 146300167
GI number: 146300167
Start: 2885857
End: 2886378
Strand: Direct
Name: azu [H]
Synonym: Fjoh_2412
Alternate gene names: 146300167
Gene position: 2885857-2886378 (Clockwise)
Preceding gene: 146300166
Following gene: 146300168
Centisome position: 47.33
GC content: 35.06
Gene sequence:
>522_bases ATGAATACAAAAACCAAAATTTCACTATTGATCCTAATGGGATTTTTAACTATAACTTCTTGCGGTAAAAAAGAAACAGC TCCGGTTGAAGAACAAACAGAAACTTCTACAGAAGGCGAACAAGCTCCAACAGCTGCGCCAGCTGAAGAAAATGTATTGG TTATTGAAGGAAACGACCAAATGCAGTTTAATAAAAATGAATTAAAAGCAGTTGCAGGAAAACCAATTAAATTGACTTTA AAACACGTTGGTAAAATTCCAAAAGAAGCAATGGGCCACAATTTAATAATTCTTCAGGAAGGAACAGACCAGAGTGCATT TGCTTTAAAAGCCAATGATGCGAAAGCGACTGATTATATTCCTGAATCTGAAAAAGCTTCTATCATTGCACATACTAAAT TATTAGGCGGCGGAGAAGAAGATACAATCGAATTTACAATTGATAAAAAAGGATCATATCCGTTTATCTGTTCTTTTCCT GGCCACGTGGCTATGATGAAAGGTGTATTAATTGTTGAGTAA
Upstream 100 bases:
>100_bases AACAACAACTTTAGAACAGCTTGCTTTGGGAGTAAAATCAGGAGACTTTTTTCTAAAAACAGTAAATACAAACGATTAAC ATTAAATAAATTACTTAAAA
Downstream 100 bases:
>100_bases ATAATATAGACTCCAAATGCTGAAAATAGGTTTGGAGTTTTTTTAAAAACCAATAAAAGATAGTTTTGTCTTTTATTAAT AGATTTCCCCCAAGAGAAAT
Product: blue (type1) copper domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MNTKTKISLLILMGFLTITSCGKKETAPVEEQTETSTEGEQAPTAAPAEENVLVIEGNDQMQFNKNELKAVAGKPIKLTL KHVGKIPKEAMGHNLIILQEGTDQSAFALKANDAKATDYIPESEKASIIAHTKLLGGGEEDTIEFTIDKKGSYPFICSFP GHVAMMKGVLIVE
Sequences:
>Translated_173_residues MNTKTKISLLILMGFLTITSCGKKETAPVEEQTETSTEGEQAPTAAPAEENVLVIEGNDQMQFNKNELKAVAGKPIKLTL KHVGKIPKEAMGHNLIILQEGTDQSAFALKANDAKATDYIPESEKASIIAHTKLLGGGEEDTIEFTIDKKGSYPFICSFP GHVAMMKGVLIVE >Mature_173_residues MNTKTKISLLILMGFLTITSCGKKETAPVEEQTETSTEGEQAPTAAPAEENVLVIEGNDQMQFNKNELKAVAGKPIKLTL KHVGKIPKEAMGHNLIILQEGTDQSAFALKANDAKATDYIPESEKASIIAHTKLLGGGEEDTIEFTIDKKGSYPFICSFP GHVAMMKGVLIVE
Specific function: Transfers electrons from cytochrome c551 to cytochrome oxidase [H]
COG id: COG3241
COG function: function code C; Azurin
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 plastocyanin-like domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014068 - InterPro: IPR000923 - InterPro: IPR008972 [H]
Pfam domain/function: PF00127 Copper-bind [H]
EC number: NA
Molecular weight: Translated: 18660; Mature: 18660
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00196 COPPER_BLUE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTKTKISLLILMGFLTITSCGKKETAPVEEQTETSTEGEQAPTAAPAEENVLVIEGNDQ CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC MQFNKNELKAVAGKPIKLTLKHVGKIPKEAMGHNLIILQEGTDQSAFALKANDAKATDYI EEECHHHHHHHCCCCEEEEHHHHCCCCHHHHCCEEEEEECCCCCCEEEEECCCCCCCCCC PESEKASIIAHTKLLGGGEEDTIEFTIDKKGSYPFICSFPGHVAMMKGVLIVE CCCCCCEEEEEEEEECCCCCCEEEEEEECCCCCCEEEECCCHHHHHCCEEEEC >Mature Secondary Structure MNTKTKISLLILMGFLTITSCGKKETAPVEEQTETSTEGEQAPTAAPAEENVLVIEGNDQ CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC MQFNKNELKAVAGKPIKLTLKHVGKIPKEAMGHNLIILQEGTDQSAFALKANDAKATDYI EEECHHHHHHHCCCCEEEEHHHHCCCCHHHHCCEEEEEECCCCCCEEEEECCCCCCCCCC PESEKASIIAHTKLLGGGEEDTIEFTIDKKGSYPFICSFPGHVAMMKGVLIVE CCCCCCEEEEEEEEECCCCCCEEEEEEECCCCCCEEEECCCHHHHHCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2116366; 6842609; 3210236; 8383207; 8639662 [H]