| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
Click here to switch to the map view.
The map label for this gene is 146300146
Identifier: 146300146
GI number: 146300146
Start: 2866847
End: 2867257
Strand: Direct
Name: 146300146
Synonym: Fjoh_2391
Alternate gene names: NA
Gene position: 2866847-2867257 (Clockwise)
Preceding gene: 146300145
Following gene: 146300148
Centisome position: 47.02
GC content: 32.36
Gene sequence:
>411_bases ATGAATTCTATTCGCACTTATATAATTATATTGTTTTTAACTTTTGGACTGCAGCAAGTTCAAAGCCAATCCTATCATTT TAAAACTTCGGGTTTCAGCGTACTGCAAAAAAATGAGAGAGGGAAATGGGGCGAATGGTCGAACCTTGACTTGGTAAATC TTTCGGTTGTGTTAGATACAGATAAACACCGTATTGTTGTGTACTCTCAGGAAATCCAGCTTTTTAATATTTTGGATTAT ATAGAAAGAGAAGAAAACGATACTGATATTGTGTATTCTTTCTTGTGTAAAGATAACGACGGAAAAGAATGTAAACTTTC AATCATTACCAGAAAAAAACAGGATTTCCGTAAACAGCTCTATATCAATTACGATGACCATATTATCGTTTATAATATTT TTACGGTTTAA
Upstream 100 bases:
>100_bases TTACCTGTCGAACAAATTGTTCAAGAAATGATAGCCGATTTTAAAGCTGCTCGCGAAGAAAAAGCTACATTTGATTTTTA ATTATCCGCAAGAAAAATTT
Downstream 100 bases:
>100_bases AATAAGCTTCTAAGATACTAAGTACTTTGGATTTAATAATAAAAAAAACTTAGTAACTTAGTATCTCAGAACCTTAGAGT CTATAAAGAGTCAATTTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MNSIRTYIIILFLTFGLQQVQSQSYHFKTSGFSVLQKNERGKWGEWSNLDLVNLSVVLDTDKHRIVVYSQEIQLFNILDY IEREENDTDIVYSFLCKDNDGKECKLSIITRKKQDFRKQLYINYDDHIIVYNIFTV
Sequences:
>Translated_136_residues MNSIRTYIIILFLTFGLQQVQSQSYHFKTSGFSVLQKNERGKWGEWSNLDLVNLSVVLDTDKHRIVVYSQEIQLFNILDY IEREENDTDIVYSFLCKDNDGKECKLSIITRKKQDFRKQLYINYDDHIIVYNIFTV >Mature_136_residues MNSIRTYIIILFLTFGLQQVQSQSYHFKTSGFSVLQKNERGKWGEWSNLDLVNLSVVLDTDKHRIVVYSQEIQLFNILDY IEREENDTDIVYSFLCKDNDGKECKLSIITRKKQDFRKQLYINYDDHIIVYNIFTV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16215; Mature: 16215
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: PS00307 LECTIN_LEGUME_BETA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSIRTYIIILFLTFGLQQVQSQSYHFKTSGFSVLQKNERGKWGEWSNLDLVNLSVVLDT CCCHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEEECCCCCCCCCCCCEEEEEEEEEEC DKHRIVVYSQEIQLFNILDYIEREENDTDIVYSFLCKDNDGKECKLSIITRKKQDFRKQL CCCEEEEEECCEEEHHHHHHHHCCCCCCEEEEEEEEECCCCCEEEEEEEECCHHHHHHEE YINYDDHIIVYNIFTV EECCCCCEEEEEEEEC >Mature Secondary Structure MNSIRTYIIILFLTFGLQQVQSQSYHFKTSGFSVLQKNERGKWGEWSNLDLVNLSVVLDT CCCHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEEECCCCCCCCCCCCEEEEEEEEEEC DKHRIVVYSQEIQLFNILDYIEREENDTDIVYSFLCKDNDGKECKLSIITRKKQDFRKQL CCCEEEEEECCEEEHHHHHHHHCCCCCCEEEEEEEEECCCCCEEEEEEEECCHHHHHHEE YINYDDHIIVYNIFTV EECCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA