| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is purM [H]
Identifier: 146300108
GI number: 146300108
Start: 2824569
End: 2825747
Strand: Direct
Name: purM [H]
Synonym: Fjoh_2353
Alternate gene names: 146300108
Gene position: 2824569-2825747 (Clockwise)
Preceding gene: 146300107
Following gene: 146300109
Centisome position: 46.33
GC content: 36.13
Gene sequence:
>1179_bases ATGAGTTCAGATTCTAGCAAAAGATATGCACAAAGAGGTGTTTCGGCATCAAAAGAAGACGTACATAACGCTATAAAAAA TATTGACAAAGGTTTATTTCCGCAGGCATTTTGTAAAATTGTCCCAGATTATTTAACTCAGGACAATGAGCACTGCTTAA TTATGCATGCTGACGGAGCGGGTACAAAATCATCTTTAGCTTATATGTACTGGAAAGAAACCGGAGATCTTTCGGTTTGG AAAGGAATTGCTCAGGATGCCTTAATCATGAATATTGACGATTTGTTATGTGTTGGCGCAACAGATAATATCTTGCTTTC TTCAACTATTGGAAGAAATAAAAACTTAATTCCTGCTGAAGTTATCTCAGCAATTATTAACGGAACAGAGGAATTAATAA ACGAATTAAAATCATTTGGCGTAACAATTCATTCAACAGGAGGAGAAACTGCTGACGTTGGAGATGTTGTTCGTACCATT ATTGTAGATTCAACTGTTACCGCTCGTATGAAACGTGAGGATGTTGTAGACAATGCTAATATTAAAGCTGGAGATGTAAT TGTTGGTTTGGCTTCTTTTGGTCAGGCTTCTTACGAAAAAGGATATAACGGAGGAATGGGAAGTAACGGATTAACTTCTG CCCGTCATGATGTTTTTGGTAAATATTTAGCAAAAAAATATCCTGAAAGTTACGATGCAGCTGTTCCAGAAGAATTAATT TATTCTGGTCAGGTAAATTTAACCGATGCTGTTGAAAACAGTCCAATAAATGCAGGTCAGCTGGTACTTTCACCAACAAG AACTTACGCACCAATTATCAAGAAAATTTTAGACAAATACACACCAAAAGACATTCACGGAATGGTGCATTGCAGCGGTG GTGCGCAGACTAAAATTTTACATTTCGTAAAAGACTTACACGTTATAAAAGACAATTTATTTCCGGTGCCGCCATTGTTC AAGTTAATTCAGGAACAATCAAAAACAGATTGGAAAGAAATGTATCAGGTTTTTAACTGCGGTCACAGAATGGAGCTTTA CGTTCCGGAAAATATCGCACAGGATATTATCGAAATTTCAAAATCATTCAATGTTGATGCACAAATCGTGGGTAGAGTAG AAGCTTCAGATTCTAAAAAACTTACAATTACAAGCGAATACGGAACATTTGAATATTAA
Upstream 100 bases:
>100_bases TCAAAATCTGCCGATTTTTTTATGAATCATACAGACGAATCAATCGAAGAATTTAAAAAAAGGGATTATCTTTGCACCAC ATCAACACAAACTAATTTTC
Downstream 100 bases:
>100_bases TTTTTAAAGTTACAAAGGTTCAAAGGTTCAGAGTTGCAAAGACTTTGAAACTTTTAAAATAATTATTAAATTTAGAGATG CATAATTGTGCATCTCTATG
Product: phosphoribosylformylglycinamidine cyclo-ligase
Products: NA
Alternate protein names: AIR synthase; AIRS; Phosphoribosyl-aminoimidazole synthetase [H]
Number of amino acids: Translated: 392; Mature: 391
Protein sequence:
>392_residues MSSDSSKRYAQRGVSASKEDVHNAIKNIDKGLFPQAFCKIVPDYLTQDNEHCLIMHADGAGTKSSLAYMYWKETGDLSVW KGIAQDALIMNIDDLLCVGATDNILLSSTIGRNKNLIPAEVISAIINGTEELINELKSFGVTIHSTGGETADVGDVVRTI IVDSTVTARMKREDVVDNANIKAGDVIVGLASFGQASYEKGYNGGMGSNGLTSARHDVFGKYLAKKYPESYDAAVPEELI YSGQVNLTDAVENSPINAGQLVLSPTRTYAPIIKKILDKYTPKDIHGMVHCSGGAQTKILHFVKDLHVIKDNLFPVPPLF KLIQEQSKTDWKEMYQVFNCGHRMELYVPENIAQDIIEISKSFNVDAQIVGRVEASDSKKLTITSEYGTFEY
Sequences:
>Translated_392_residues MSSDSSKRYAQRGVSASKEDVHNAIKNIDKGLFPQAFCKIVPDYLTQDNEHCLIMHADGAGTKSSLAYMYWKETGDLSVW KGIAQDALIMNIDDLLCVGATDNILLSSTIGRNKNLIPAEVISAIINGTEELINELKSFGVTIHSTGGETADVGDVVRTI IVDSTVTARMKREDVVDNANIKAGDVIVGLASFGQASYEKGYNGGMGSNGLTSARHDVFGKYLAKKYPESYDAAVPEELI YSGQVNLTDAVENSPINAGQLVLSPTRTYAPIIKKILDKYTPKDIHGMVHCSGGAQTKILHFVKDLHVIKDNLFPVPPLF KLIQEQSKTDWKEMYQVFNCGHRMELYVPENIAQDIIEISKSFNVDAQIVGRVEASDSKKLTITSEYGTFEY >Mature_391_residues SSDSSKRYAQRGVSASKEDVHNAIKNIDKGLFPQAFCKIVPDYLTQDNEHCLIMHADGAGTKSSLAYMYWKETGDLSVWK GIAQDALIMNIDDLLCVGATDNILLSSTIGRNKNLIPAEVISAIINGTEELINELKSFGVTIHSTGGETADVGDVVRTII VDSTVTARMKREDVVDNANIKAGDVIVGLASFGQASYEKGYNGGMGSNGLTSARHDVFGKYLAKKYPESYDAAVPEELIY SGQVNLTDAVENSPINAGQLVLSPTRTYAPIIKKILDKYTPKDIHGMVHCSGGAQTKILHFVKDLHVIKDNLFPVPPLFK LIQEQSKTDWKEMYQVFNCGHRMELYVPENIAQDIIEISKSFNVDAQIVGRVEASDSKKLTITSEYGTFEY
Specific function: De novo purine biosynthesis; fifth step. [C]
COG id: COG0150
COG function: function code F; Phosphoribosylaminoimidazole (AIR) synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AIR synthase family [H]
Homologues:
Organism=Escherichia coli, GI1788845, Length=354, Percent_Identity=24.5762711864407, Blast_Score=69, Evalue=4e-13,
Paralogues:
None
Copy number: 180 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR004733 - InterPro: IPR016188 [H]
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]
EC number: =6.3.3.1 [H]
Molecular weight: Translated: 43026; Mature: 42895
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSDSSKRYAQRGVSASKEDVHNAIKNIDKGLFPQAFCKIVPDYLTQDNEHCLIMHADGA CCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEECCCC GTKSSLAYMYWKETGDLSVWKGIAQDALIMNIDDLLCVGATDNILLSSTIGRNKNLIPAE CCCCCEEEEEEECCCCHHHHHHHHHCCEEEECCCEEEECCCCCEEEEECCCCCCCCCHHH VISAIINGTEELINELKSFGVTIHSTGGETADVGDVVRTIIVDSTVTARMKREDVVDNAN HHHHHHCCHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCC IKAGDVIVGLASFGQASYEKGYNGGMGSNGLTSARHDVFGKYLAKKYPESYDAAVPEELI CCCCCEEEEHHHCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHH YSGQVNLTDAVENSPINAGQLVLSPTRTYAPIIKKILDKYTPKDIHGMVHCSGGAQTKIL HCCCCCCHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCHHCEEEEECCCCHHHHH HFVKDLHVIKDNLFPVPPLFKLIQEQSKTDWKEMYQVFNCGHRMELYVPENIAQDIIEIS HHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEECHHHHHHHHHHH KSFNVDAQIVGRVEASDSKKLTITSEYGTFEY HCCCCCEEEEEEEECCCCCEEEEEECCCCCCC >Mature Secondary Structure SSDSSKRYAQRGVSASKEDVHNAIKNIDKGLFPQAFCKIVPDYLTQDNEHCLIMHADGA CCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEECCCC GTKSSLAYMYWKETGDLSVWKGIAQDALIMNIDDLLCVGATDNILLSSTIGRNKNLIPAE CCCCCEEEEEEECCCCHHHHHHHHHCCEEEECCCEEEECCCCCEEEEECCCCCCCCCHHH VISAIINGTEELINELKSFGVTIHSTGGETADVGDVVRTIIVDSTVTARMKREDVVDNAN HHHHHHCCHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCC IKAGDVIVGLASFGQASYEKGYNGGMGSNGLTSARHDVFGKYLAKKYPESYDAAVPEELI CCCCCEEEEHHHCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHH YSGQVNLTDAVENSPINAGQLVLSPTRTYAPIIKKILDKYTPKDIHGMVHCSGGAQTKIL HCCCCCCHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCHHCEEEEECCCCHHHHH HFVKDLHVIKDNLFPVPPLFKLIQEQSKTDWKEMYQVFNCGHRMELYVPENIAQDIIEIS HHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEECHHHHHHHHHHH KSFNVDAQIVGRVEASDSKKLTITSEYGTFEY HCCCCCEEEEEEEECCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA