| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is csgG [H]
Identifier: 146300106
GI number: 146300106
Start: 2821514
End: 2822878
Strand: Direct
Name: csgG [H]
Synonym: Fjoh_2351
Alternate gene names: 146300106
Gene position: 2821514-2822878 (Clockwise)
Preceding gene: 146300105
Following gene: 146300107
Centisome position: 46.28
GC content: 37.29
Gene sequence:
>1365_bases ATGAGATTACATTACTACTTATTTATTCTGATCGCATTTCTTTTTGCGGGCTGCGGTGCTTATTACAATCAGCCGACCGG AGTGCAAAAAGCAATTTTGGGAGAAAGCACTCCTGCGACATCTTTATTAAAAGACCTGCCAAAACCAAAAGAGCAGGTTG TAGTTGGGGTTTATAAATTCCGTGACCAAACAGGACAATATAAACCGCAGGAAAACGGAAGCAGTTTTAGTACAGCCGTA ACCCAGGGAGCAACTTCAATTTTAATAAAGGCTTTAGAAGATTCAAAATGGTTTATCCCAATTGAACGCGAAAACATTGG AAACCTGCTTCAGGAACGAAACCTTATTCGTGCTACAAGACAGGAATATGTAAAAAATGCCAATCCAAACGAACCACAGT TGACCCCATTATTGTATGCCGGAGTTTTGCTCGAAGGCGGTATTGTTTCGTATGATTCTAATATTATTACCGGAGGTTTT GGTGCTAGATATTTTGGTGCCGGAGCATCAGTAAAATACCGTCAGGATCGTGTTACCATTTATTTAAGGATGATTTCAAC ATCAAACGGAAAAATTTTAAAATCGGTTTATATCTCGAAAACCATTTTATCGCAGGCAATTGATGAAAGTTTGTTTCGAT ATGTAAATTTTAAAAGACTTTTGGAAGTTGAAACAGGTTATACAACAAATGAGCCCGTACACATGGCGGTTACCGAAGCC ATAGAAAAAGCTGTAGAATCTTTAGTCTTAGAAGGACTTCAGGATAATATTTGGGAAGCCGATGCACCAAAATGGCAGGT CGATAATTTGATAAAAGCCTATAATGAAGAAAATAAAACTGCCGATGTAACAGGACTTTACGGAAGAGTTTTAGAAAACA GAAGAGGCAAATATGCCATAGAAGTTTCGGGAGGAGCTGCTTTAATGGACGGAGATTATCGTGATCCGCTTTTAAGACCT TTTGGGCGAGGTGCATTAAAATTCTTTTTAACACCTTCCTTTAATATAAGTGCTTCTACAAATGTTGTAAATCTGGCCAA CAAAAATTTGCTCGATGTAGGATATATAACATACGATCTTAATCTGGAATGGATTTTACTTCCAAAAGACCGATTAACAC CATATTTATATGGCGGCGGCGGACTTGCCATGAATCGGAAATTTGAAAACACATACGGAAAACTGCAGTATGGAGCGGGA CTCGAATATTTGGTTTCAGACCAAATTGGACTAAAATTATTTGCTGAACAAAACATCAATTTTAGTGATAATGTCGATTA TATAAAAGCCGGAACCAGAGACGATTATTATTACAAGTTTGGTTTTGGACTTACTTATTATTTTGGTAAAAAGAAGAACA AGTAA
Upstream 100 bases:
>100_bases TATTCTGTCGACGTTTATCCATCAGCAGATGGACTCACACTTAATATTTTAGATACTAATACAGGCGAACAAACTCAGGT AATCATCCCAAATCAATAAC
Downstream 100 bases:
>100_bases GGAGATCAAATCTGAAATATAAAATGAAATTTAAATTTAAAAAAAAGGAATAATGAAGTATTTATACAAAATAGCAAGTG TACTTTTTTTATTGTTTTTG
Product: curli production assembly/transport component CsgG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 454; Mature: 454
Protein sequence:
>454_residues MRLHYYLFILIAFLFAGCGAYYNQPTGVQKAILGESTPATSLLKDLPKPKEQVVVGVYKFRDQTGQYKPQENGSSFSTAV TQGATSILIKALEDSKWFIPIERENIGNLLQERNLIRATRQEYVKNANPNEPQLTPLLYAGVLLEGGIVSYDSNIITGGF GARYFGAGASVKYRQDRVTIYLRMISTSNGKILKSVYISKTILSQAIDESLFRYVNFKRLLEVETGYTTNEPVHMAVTEA IEKAVESLVLEGLQDNIWEADAPKWQVDNLIKAYNEENKTADVTGLYGRVLENRRGKYAIEVSGGAALMDGDYRDPLLRP FGRGALKFFLTPSFNISASTNVVNLANKNLLDVGYITYDLNLEWILLPKDRLTPYLYGGGGLAMNRKFENTYGKLQYGAG LEYLVSDQIGLKLFAEQNINFSDNVDYIKAGTRDDYYYKFGFGLTYYFGKKKNK
Sequences:
>Translated_454_residues MRLHYYLFILIAFLFAGCGAYYNQPTGVQKAILGESTPATSLLKDLPKPKEQVVVGVYKFRDQTGQYKPQENGSSFSTAV TQGATSILIKALEDSKWFIPIERENIGNLLQERNLIRATRQEYVKNANPNEPQLTPLLYAGVLLEGGIVSYDSNIITGGF GARYFGAGASVKYRQDRVTIYLRMISTSNGKILKSVYISKTILSQAIDESLFRYVNFKRLLEVETGYTTNEPVHMAVTEA IEKAVESLVLEGLQDNIWEADAPKWQVDNLIKAYNEENKTADVTGLYGRVLENRRGKYAIEVSGGAALMDGDYRDPLLRP FGRGALKFFLTPSFNISASTNVVNLANKNLLDVGYITYDLNLEWILLPKDRLTPYLYGGGGLAMNRKFENTYGKLQYGAG LEYLVSDQIGLKLFAEQNINFSDNVDYIKAGTRDDYYYKFGFGLTYYFGKKKNK >Mature_454_residues MRLHYYLFILIAFLFAGCGAYYNQPTGVQKAILGESTPATSLLKDLPKPKEQVVVGVYKFRDQTGQYKPQENGSSFSTAV TQGATSILIKALEDSKWFIPIERENIGNLLQERNLIRATRQEYVKNANPNEPQLTPLLYAGVLLEGGIVSYDSNIITGGF GARYFGAGASVKYRQDRVTIYLRMISTSNGKILKSVYISKTILSQAIDESLFRYVNFKRLLEVETGYTTNEPVHMAVTEA IEKAVESLVLEGLQDNIWEADAPKWQVDNLIKAYNEENKTADVTGLYGRVLENRRGKYAIEVSGGAALMDGDYRDPLLRP FGRGALKFFLTPSFNISASTNVVNLANKNLLDVGYITYDLNLEWILLPKDRLTPYLYGGGGLAMNRKFENTYGKLQYGAG LEYLVSDQIGLKLFAEQNINFSDNVDYIKAGTRDDYYYKFGFGLTYYFGKKKNK
Specific function: May be involved in the biogenesis of curli organelles [H]
COG id: COG1462
COG function: function code M; Uncharacterized protein involved in formation of curli polymers
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CsgG family [H]
Homologues:
Organism=Escherichia coli, GI1787274, Length=268, Percent_Identity=41.7910447761194, Blast_Score=208, Evalue=5e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005534 [H]
Pfam domain/function: PF03783 CsgG [H]
EC number: NA
Molecular weight: Translated: 51021; Mature: 51021
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLHYYLFILIAFLFAGCGAYYNQPTGVQKAILGESTPATSLLKDLPKPKEQVVVGVYKF CEEHHHHHHHHHHHHHCCCHHCCCCCCHHHHHCCCCCCHHHHHHHCCCCHHHEEEEEEEE RDQTGQYKPQENGSSFSTAVTQGATSILIKALEDSKWFIPIERENIGNLLQERNLIRATR CCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHH QEYVKNANPNEPQLTPLLYAGVLLEGGIVSYDSNIITGGFGARYFGAGASVKYRQDRVTI HHHHHCCCCCCCCCHHHHHHHHHHCCCEEEECCCEEECCCCCHHCCCCCCEEEECCEEEE YLRMISTSNGKILKSVYISKTILSQAIDESLFRYVNFKRLLEVETGYTTNEPVHMAVTEA EEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEECCCCCCCCHHHHHHHH IEKAVESLVLEGLQDNIWEADAPKWQVDNLIKAYNEENKTADVTGLYGRVLENRRGKYAI HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEE EVSGGAALMDGDYRDPLLRPFGRGALKFFLTPSFNISASTNVVNLANKNLLDVGYITYDL EECCCEEEECCCCCCHHHHHCCCCEEEEEECCCCCCCCCCCEEEECCCCEEEEEEEEEEE NLEWILLPKDRLTPYLYGGGGLAMNRKFENTYGKLQYGAGLEYLVSDQIGLKLFAEQNIN CEEEEEECHHHCCCEEECCCCEEECCCHHCCCCEEEECCCCEEEECCCCCEEEEEECCCC FSDNVDYIKAGTRDDYYYKFGFGLTYYFGKKKNK CCCCCCEEECCCCCCEEEEEECCEEEEECCCCCC >Mature Secondary Structure MRLHYYLFILIAFLFAGCGAYYNQPTGVQKAILGESTPATSLLKDLPKPKEQVVVGVYKF CEEHHHHHHHHHHHHHCCCHHCCCCCCHHHHHCCCCCCHHHHHHHCCCCHHHEEEEEEEE RDQTGQYKPQENGSSFSTAVTQGATSILIKALEDSKWFIPIERENIGNLLQERNLIRATR CCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHH QEYVKNANPNEPQLTPLLYAGVLLEGGIVSYDSNIITGGFGARYFGAGASVKYRQDRVTI HHHHHCCCCCCCCCHHHHHHHHHHCCCEEEECCCEEECCCCCHHCCCCCCEEEECCEEEE YLRMISTSNGKILKSVYISKTILSQAIDESLFRYVNFKRLLEVETGYTTNEPVHMAVTEA EEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEECCCCCCCCHHHHHHHH IEKAVESLVLEGLQDNIWEADAPKWQVDNLIKAYNEENKTADVTGLYGRVLENRRGKYAI HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEE EVSGGAALMDGDYRDPLLRPFGRGALKFFLTPSFNISASTNVVNLANKNLLDVGYITYDL EECCCEEEECCCCCCHHHHHCCCCEEEEEECCCCCCCCCCCEEEECCCCEEEEEEEEEEE NLEWILLPKDRLTPYLYGGGGLAMNRKFENTYGKLQYGAGLEYLVSDQIGLKLFAEQNIN CEEEEEECHHHCCCEEECCCCEEECCCHHCCCCEEEECCCCEEEECCCCCEEEEEECCCC FSDNVDYIKAGTRDDYYYKFGFGLTYYFGKKKNK CCCCCCEEECCCCCCEEEEEECCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA