| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300097
Identifier: 146300097
GI number: 146300097
Start: 2813087
End: 2813605
Strand: Direct
Name: 146300097
Synonym: Fjoh_2342
Alternate gene names: NA
Gene position: 2813087-2813605 (Clockwise)
Preceding gene: 146300096
Following gene: 146300100
Centisome position: 46.14
GC content: 33.91
Gene sequence:
>519_bases ATGAAAAAGATACTTACACTATTCGCAGTTGTTGGGTTAATTGCATTTACAAGCTGTGAAGGGCCAGAAGGGCCTCCGGG ACAAGATGGAGGAGTTTTGCTTCCTTATGTTTATGAAATGAATAATGTTAATTTTGCTGGACCAGATTTTGCTGTTACCA GTACACCGTCAGGTATGTTGTCTGGAGATAATGTTTTGGTGTATGAGTTAGTTAGTGCTCCAAATGCAGTAGACAGCTGG GCATTGTTACCTCAGATATATTACTTTAATGATGGTTTAGAAACTGCTCAGTATAATTTTAACTTTTCTAAAAATAGAGT TACGGTTTTTATTGATGGAAGTTTGAGTGATTTATCTCAGTTGCCAAGTAGTTTTAGACTTGGAAAAACATTTAGAGTTG TTATTATTCCTGGAGATGACGGGTTAAATGCAAAAAAAGCAAAAGCTGATTATTCAGATTATAATGCTGTAATTAAAAAA TATAACATTGATGATAGCAATGTTAAGCAATTAAACTAA
Upstream 100 bases:
>100_bases AAGAAATAGGTAAAAAATATCGAATTTTTAAACCTTAAGATTTTTTTTGGTTTGATTTTTGGAATACCTTTATAGTACAA ACCTTAAAAAAGATAATATT
Downstream 100 bases:
>100_bases TTCTGAAATGAATTAATAAAAAAAAAAGGAAATCTTACGATTTCCTTTTTTTTATACCTAATATATTAGAACTATTAATG CTGATCTAAATCAGAATCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MKKILTLFAVVGLIAFTSCEGPEGPPGQDGGVLLPYVYEMNNVNFAGPDFAVTSTPSGMLSGDNVLVYELVSAPNAVDSW ALLPQIYYFNDGLETAQYNFNFSKNRVTVFIDGSLSDLSQLPSSFRLGKTFRVVIIPGDDGLNAKKAKADYSDYNAVIKK YNIDDSNVKQLN
Sequences:
>Translated_172_residues MKKILTLFAVVGLIAFTSCEGPEGPPGQDGGVLLPYVYEMNNVNFAGPDFAVTSTPSGMLSGDNVLVYELVSAPNAVDSW ALLPQIYYFNDGLETAQYNFNFSKNRVTVFIDGSLSDLSQLPSSFRLGKTFRVVIIPGDDGLNAKKAKADYSDYNAVIKK YNIDDSNVKQLN >Mature_172_residues MKKILTLFAVVGLIAFTSCEGPEGPPGQDGGVLLPYVYEMNNVNFAGPDFAVTSTPSGMLSGDNVLVYELVSAPNAVDSW ALLPQIYYFNDGLETAQYNFNFSKNRVTVFIDGSLSDLSQLPSSFRLGKTFRVVIIPGDDGLNAKKAKADYSDYNAVIKK YNIDDSNVKQLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18736; Mature: 18736
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKILTLFAVVGLIAFTSCEGPEGPPGQDGGVLLPYVYEMNNVNFAGPDFAVTSTPSGML CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEECCCCCCC SGDNVLVYELVSAPNAVDSWALLPQIYYFNDGLETAQYNFNFSKNRVTVFIDGSLSDLSQ CCCCEEEEEEECCCCCCCCHHHHEEEEEECCCCCEEEEEEEECCCEEEEEECCCHHHHHH LPSSFRLGKTFRVVIIPGDDGLNAKKAKADYSDYNAVIKKYNIDDSNVKQLN CCHHCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHEEEEEECCCCCCCCCCC >Mature Secondary Structure MKKILTLFAVVGLIAFTSCEGPEGPPGQDGGVLLPYVYEMNNVNFAGPDFAVTSTPSGML CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEECCCCCCC SGDNVLVYELVSAPNAVDSWALLPQIYYFNDGLETAQYNFNFSKNRVTVFIDGSLSDLSQ CCCCEEEEEEECCCCCCCCHHHHEEEEEECCCCCEEEEEEEECCCEEEEEECCCHHHHHH LPSSFRLGKTFRVVIIPGDDGLNAKKAKADYSDYNAVIKKYNIDDSNVKQLN CCHHCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA