| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300063
Identifier: 146300063
GI number: 146300063
Start: 2777033
End: 2777839
Strand: Reverse
Name: 146300063
Synonym: Fjoh_2308
Alternate gene names: NA
Gene position: 2777839-2777033 (Counterclockwise)
Preceding gene: 146300066
Following gene: 146300062
Centisome position: 45.56
GC content: 25.65
Gene sequence:
>807_bases GTGAAAAGTAGTGGAAGAGAAAAAATTGAAGACCAAATTTTCGATACAAATTTAACTTCAGAAAATTTTCATAATAAACA TTTTATAAGAGTTGGCAGTAAAGAACAAACATTTTCTAAAGTAAATTTTAGTCACACATATTTTGAAAATTGCTATTTTA GAAATATTATATTTAACACTTGTGATTTTAACGGTTGCAAGTTTATTAATTGTAATTTTCATGGAAGTACTTTTCCAGGA AGTAAGTTCGATTATGCAACCTTCGACAAAACATTTATAGATAATGAAATTTTAGATAATAATTGTCCTAGTTATAATAA TCTTATTCTAAAATTTGCTAGAACACTAAGAATCAACTATCAAGGAATTGGAGATTCTTTTGCTGTAAATAAAGCAATAA AAATTGAACTTGAGGCTTCTAAAGAACATCTTTATCAATCTTGGAAATCTAAGTCAACATATTATCGAGATAAATACAAG GGTTGGGATCGTTTTTCTATGTTTTTTGAATGGCTCTATTTTAAGTTTCAAGACTTTGTTTGGGGCAATGGAGAAAGTCC AATTAAATTATTAAGAACAGGTCTTGTTTTATGGTTCATTTTCTCTCTTTTTGATACTATATATTTCAAAAATCCTAATC TATTATCTGATTATTTAGGTTCGTTTTCTTTATTACCATCAATTTTTATGGGAATAAATAAACCTGCAAAGTACTCCGAT TTTTATTTAACATTTATAACAATTTTAAGATTTATTGGTTTTGCATTGTTTACGTCAATAATTATAAAAAGATTTAATAG AAGATAA
Upstream 100 bases:
>100_bases AAAAATTTTAAAATCAGGTGTTTTTACTTAGTTGTTTGTTAAAATTAAAAGCGAGGTTTGCTTAAATTATTTGAATCTAA AAATTTAACTAGAAAAAGTA
Downstream 100 bases:
>100_bases TGGAAATTTATGCATTTGGCTCAATAACGCGAGGGGATATTGACAAGTTATCGGACGTTGATTTATTATTGTTAAAAGAT ATTGATGAGAAAATTTCAGA
Product: pentapeptide repeat-containing protein
Products: NA
Alternate protein names: Pentapeptide Repeat Protein
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MKSSGREKIEDQIFDTNLTSENFHNKHFIRVGSKEQTFSKVNFSHTYFENCYFRNIIFNTCDFNGCKFINCNFHGSTFPG SKFDYATFDKTFIDNEILDNNCPSYNNLILKFARTLRINYQGIGDSFAVNKAIKIELEASKEHLYQSWKSKSTYYRDKYK GWDRFSMFFEWLYFKFQDFVWGNGESPIKLLRTGLVLWFIFSLFDTIYFKNPNLLSDYLGSFSLLPSIFMGINKPAKYSD FYLTFITILRFIGFALFTSIIIKRFNRR
Sequences:
>Translated_268_residues MKSSGREKIEDQIFDTNLTSENFHNKHFIRVGSKEQTFSKVNFSHTYFENCYFRNIIFNTCDFNGCKFINCNFHGSTFPG SKFDYATFDKTFIDNEILDNNCPSYNNLILKFARTLRINYQGIGDSFAVNKAIKIELEASKEHLYQSWKSKSTYYRDKYK GWDRFSMFFEWLYFKFQDFVWGNGESPIKLLRTGLVLWFIFSLFDTIYFKNPNLLSDYLGSFSLLPSIFMGINKPAKYSD FYLTFITILRFIGFALFTSIIIKRFNRR >Mature_268_residues MKSSGREKIEDQIFDTNLTSENFHNKHFIRVGSKEQTFSKVNFSHTYFENCYFRNIIFNTCDFNGCKFINCNFHGSTFPG SKFDYATFDKTFIDNEILDNNCPSYNNLILKFARTLRINYQGIGDSFAVNKAIKIELEASKEHLYQSWKSKSTYYRDKYK GWDRFSMFFEWLYFKFQDFVWGNGESPIKLLRTGLVLWFIFSLFDTIYFKNPNLLSDYLGSFSLLPSIFMGINKPAKYSD FYLTFITILRFIGFALFTSIIIKRFNRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31843; Mature: 31843
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSSGREKIEDQIFDTNLTSENFHNKHFIRVGSKEQTFSKVNFSHTYFENCYFRNIIFNT CCCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHHCC CDFNGCKFINCNFHGSTFPGSKFDYATFDKTFIDNEILDNNCPSYNNLILKFARTLRINY CCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHCCHHHCCCCCCHHHHHHHHHHHHEEEE QGIGDSFAVNKAIKIELEASKEHLYQSWKSKSTYYRDKYKGWDRFSMFFEWLYFKFQDFV CCCCCCCEECCEEEEEEECHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHC WGNGESPIKLLRTGLVLWFIFSLFDTIYFKNPNLLSDYLGSFSLLPSIFMGINKPAKYSD CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHH FYLTFITILRFIGFALFTSIIIKRFNRR HHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKSSGREKIEDQIFDTNLTSENFHNKHFIRVGSKEQTFSKVNFSHTYFENCYFRNIIFNT CCCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHHCC CDFNGCKFINCNFHGSTFPGSKFDYATFDKTFIDNEILDNNCPSYNNLILKFARTLRINY CCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHCCHHHCCCCCCHHHHHHHHHHHHEEEE QGIGDSFAVNKAIKIELEASKEHLYQSWKSKSTYYRDKYKGWDRFSMFFEWLYFKFQDFV CCCCCCCEECCEEEEEEECHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHC WGNGESPIKLLRTGLVLWFIFSLFDTIYFKNPNLLSDYLGSFSLLPSIFMGINKPAKYSD CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHH FYLTFITILRFIGFALFTSIIIKRFNRR HHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA