| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300062
Identifier: 146300062
GI number: 146300062
Start: 2776407
End: 2777033
Strand: Reverse
Name: 146300062
Synonym: Fjoh_2307
Alternate gene names: NA
Gene position: 2777033-2776407 (Counterclockwise)
Preceding gene: 146300063
Following gene: 146300061
Centisome position: 45.55
GC content: 25.68
Gene sequence:
>627_bases ATGGAAATTTATGCATTTGGCTCAATAACGCGAGGGGATATTGACAAGTTATCGGACGTTGATTTATTATTGTTAAAAGA TATTGATGAGAAAATTTCAGATATTGATAAAGAGCAATTTTCAATTTATTCATATCAAAGAATACTAGAGTTATGGAAAG AAGGAAATCCTTTCGCATGGCATCTATATAGTGAATCAAAATGTATTTTTTGCACAAATTCAGTCTCTTATATAGAATCA TTAGGAAAGCCTTCTCAGTATAAAAATCTTTTAAATGATTTGAATAAGTTTTATAAATTATTTAATGATTCAAAAGATTC TATTGAACAAAACAATTATTCAATTGATTTTGATTTATCTATGATCTTTTTATCCATTAGAAATTTTGCTTCTTGTTTTT CACTAGGTTATTTAGGAAAACTTGAATTTTCTCGTGATTCTGCTATAAAAATTAACCTCCATCCTCTCAAAATCAATCCG AAAACTTATGATAGATTAAAGCAATCTAGATTACTTGCTACTAGAGGAATTGGTAAAAAAATTTCAAAAGAAGAATTAGA AACTATTCAAGAAGATTTTCCAGAAATAGAAAAATGGTTTAATAGAATTTTAATACTTATAAAATAA
Upstream 100 bases:
>100_bases CAAAGTACTCCGATTTTTATTTAACATTTATAACAATTTTAAGATTTATTGGTTTTGCATTGTTTACGTCAATAATTATA AAAAGATTTAATAGAAGATA
Downstream 100 bases:
>100_bases ATGGATGAATTTTTAAATAGAATTACAGCTCAACGAAAAGTCATAAATATAATTAATAAGGAAACAAACTACAATTTCCC TTTAGTTGGTCTTTCTTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MEIYAFGSITRGDIDKLSDVDLLLLKDIDEKISDIDKEQFSIYSYQRILELWKEGNPFAWHLYSESKCIFCTNSVSYIES LGKPSQYKNLLNDLNKFYKLFNDSKDSIEQNNYSIDFDLSMIFLSIRNFASCFSLGYLGKLEFSRDSAIKINLHPLKINP KTYDRLKQSRLLATRGIGKKISKEELETIQEDFPEIEKWFNRILILIK
Sequences:
>Translated_208_residues MEIYAFGSITRGDIDKLSDVDLLLLKDIDEKISDIDKEQFSIYSYQRILELWKEGNPFAWHLYSESKCIFCTNSVSYIES LGKPSQYKNLLNDLNKFYKLFNDSKDSIEQNNYSIDFDLSMIFLSIRNFASCFSLGYLGKLEFSRDSAIKINLHPLKINP KTYDRLKQSRLLATRGIGKKISKEELETIQEDFPEIEKWFNRILILIK >Mature_208_residues MEIYAFGSITRGDIDKLSDVDLLLLKDIDEKISDIDKEQFSIYSYQRILELWKEGNPFAWHLYSESKCIFCTNSVSYIES LGKPSQYKNLLNDLNKFYKLFNDSKDSIEQNNYSIDFDLSMIFLSIRNFASCFSLGYLGKLEFSRDSAIKINLHPLKINP KTYDRLKQSRLLATRGIGKKISKEELETIQEDFPEIEKWFNRILILIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24400; Mature: 24400
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIYAFGSITRGDIDKLSDVDLLLLKDIDEKISDIDKEQFSIYSYQRILELWKEGNPFAW CEEEEECCCCCCCHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEE HLYSESKCIFCTNSVSYIESLGKPSQYKNLLNDLNKFYKLFNDSKDSIEQNNYSIDFDLS EEECCCEEEEEECCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEHHH MIFLSIRNFASCFSLGYLGKLEFSRDSAIKINLHPLKINPKTYDRLKQSRLLATRGIGKK HHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEEEEEECCHHHHHHHHHHHHHHHCCCCC ISKEELETIQEDFPEIEKWFNRILILIK CCHHHHHHHHHHHHHHHHHHHHHEEEEC >Mature Secondary Structure MEIYAFGSITRGDIDKLSDVDLLLLKDIDEKISDIDKEQFSIYSYQRILELWKEGNPFAW CEEEEECCCCCCCHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEE HLYSESKCIFCTNSVSYIESLGKPSQYKNLLNDLNKFYKLFNDSKDSIEQNNYSIDFDLS EEECCCEEEEEECCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEHHH MIFLSIRNFASCFSLGYLGKLEFSRDSAIKINLHPLKINPKTYDRLKQSRLLATRGIGKK HHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEEEEEECCHHHHHHHHHHHHHHHCCCCC ISKEELETIQEDFPEIEKWFNRILILIK CCHHHHHHHHHHHHHHHHHHHHHEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA