| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300029
Identifier: 146300029
GI number: 146300029
Start: 2741804
End: 2742730
Strand: Direct
Name: 146300029
Synonym: Fjoh_2274
Alternate gene names: NA
Gene position: 2741804-2742730 (Clockwise)
Preceding gene: 146300028
Following gene: 146300030
Centisome position: 44.97
GC content: 32.69
Gene sequence:
>927_bases ATGAAAAAAATACTACTCCTTATAAATTTCCTCTTTTACTTATCAGTTTCTGCGCAGCAAGATCCCGAGTATACACATTA TATGTATAATATGAGCGTTGTAAACCCGGCATACGCAACAGGAGTTCCGGCTATGATGAATTTTGGAGCCTTATACAGAA CTCAATGGGTAGGCGCTGTTGGTGCTCCTAAAACATTCACTTTTTTTGGACATACTGCCATTACAGATAAAATAGAAGCA GGTTTATCTTTTATTTCAGATGATATAGGTGACGGTGCTAAAAAAGAAAATAACATTTATGCTGATTTTGCATACGTTTT AAATCTGGGAGGGAAAAATAAACTATCTCTTGGATTAAAAGCAGGTTTTTCGTCTATACAAAGTAATTTTAACGGATTTC GTTTTACAGATCCGCAAACTGATTTTGCTTTTTCAGAAAATATAAATGCAACAAAGCCAAACATTGGAGTTGGAGCTTAT TATTTTAGAGACAATCTTTACATAGGATTGTCTGCTCCTAATTTATTGAAATCAAAATACATTGAAGAAAAATCAGGAAT TAATGCTTTTGGAGCCGAAGAAATACATACCTTTTTAACCGCAGGATATGTTTTTCAGGTTAATAATATGTGGAAAATTA AACCTGCTTTTATGTCAAAATTTGTAAAAGGCGCTCCAATTACTTTAGACGTTACGGCAAATGTTTTGTATAATGAAAAA TTTGAATTTGGAGCTGCATATAGAATAGATGATTCAGTAAGTGCTTTGTTTAATATTAATGTTACTCCTTCGCTTAGAGT AGGTTATGCTTACGATTATACGCTTACTAATTTTGGTCAGTTCAATTCAGGAACTCACGAAATTATGCTCCTCTTTGATC TTGATTTATTAGGAAAAGGGTTTGATAAATCTCCAAGATTCTTTTAA
Upstream 100 bases:
>100_bases TATGTATTGCATTTTAATAAAGATAACAAACCGCCAAAACAAGGCCGTCTTTATTTAAATCGATAAATCTCTTTTTTATA TTATTTAATATAATTTTCAA
Downstream 100 bases:
>100_bases AATGAAAAATATGAAAAAACTACTCGTTATTATATTCGTATTTTCAATACAGTTTATAAATGCTCAGGATCAGGAATTGA TAAGAGCAAAGAAATTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MKKILLLINFLFYLSVSAQQDPEYTHYMYNMSVVNPAYATGVPAMMNFGALYRTQWVGAVGAPKTFTFFGHTAITDKIEA GLSFISDDIGDGAKKENNIYADFAYVLNLGGKNKLSLGLKAGFSSIQSNFNGFRFTDPQTDFAFSENINATKPNIGVGAY YFRDNLYIGLSAPNLLKSKYIEEKSGINAFGAEEIHTFLTAGYVFQVNNMWKIKPAFMSKFVKGAPITLDVTANVLYNEK FEFGAAYRIDDSVSALFNINVTPSLRVGYAYDYTLTNFGQFNSGTHEIMLLFDLDLLGKGFDKSPRFF
Sequences:
>Translated_308_residues MKKILLLINFLFYLSVSAQQDPEYTHYMYNMSVVNPAYATGVPAMMNFGALYRTQWVGAVGAPKTFTFFGHTAITDKIEA GLSFISDDIGDGAKKENNIYADFAYVLNLGGKNKLSLGLKAGFSSIQSNFNGFRFTDPQTDFAFSENINATKPNIGVGAY YFRDNLYIGLSAPNLLKSKYIEEKSGINAFGAEEIHTFLTAGYVFQVNNMWKIKPAFMSKFVKGAPITLDVTANVLYNEK FEFGAAYRIDDSVSALFNINVTPSLRVGYAYDYTLTNFGQFNSGTHEIMLLFDLDLLGKGFDKSPRFF >Mature_308_residues MKKILLLINFLFYLSVSAQQDPEYTHYMYNMSVVNPAYATGVPAMMNFGALYRTQWVGAVGAPKTFTFFGHTAITDKIEA GLSFISDDIGDGAKKENNIYADFAYVLNLGGKNKLSLGLKAGFSSIQSNFNGFRFTDPQTDFAFSENINATKPNIGVGAY YFRDNLYIGLSAPNLLKSKYIEEKSGINAFGAEEIHTFLTAGYVFQVNNMWKIKPAFMSKFVKGAPITLDVTANVLYNEK FEFGAAYRIDDSVSALFNINVTPSLRVGYAYDYTLTNFGQFNSGTHEIMLLFDLDLLGKGFDKSPRFF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34328; Mature: 34328
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKILLLINFLFYLSVSAQQDPEYTHYMYNMSVVNPAYATGVPAMMNFGALYRTQWVGAV CCHHHHHHHHHHHEEECCCCCCCEEEEEEEEEECCCHHHCCCHHHHHCCHHHHHHCCCCC GAPKTFTFFGHTAITDKIEAGLSFISDDIGDGAKKENNIYADFAYVLNLGGKNKLSLGLK CCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCCEEEEEHH AGFSSIQSNFNGFRFTDPQTDFAFSENINATKPNIGVGAYYFRDNLYIGLSAPNLLKSKY HHHHHHHHCCCCEEECCCCCCCEECCCCCCCCCCCCEEEEEEECCEEEEECCCHHHHHHH IEEKSGINAFGAEEIHTFLTAGYVFQVNNMWKIKPAFMSKFVKGAPITLDVTANVLYNEK HHHHCCCCCCCHHHHHHHHHCCEEEEECCEEEECHHHHHHHHCCCCEEEEEEEEEEECCC FEFGAAYRIDDSVSALFNINVTPSLRVGYAYDYTLTNFGQFNSGTHEIMLLFDLDLLGKG CCCCEEEEECCCCEEEEEECCCCCEEEEEEEEEEECCCCCCCCCCEEEEEEEEHHHHCCC FDKSPRFF CCCCCCCC >Mature Secondary Structure MKKILLLINFLFYLSVSAQQDPEYTHYMYNMSVVNPAYATGVPAMMNFGALYRTQWVGAV CCHHHHHHHHHHHEEECCCCCCCEEEEEEEEEECCCHHHCCCHHHHHCCHHHHHHCCCCC GAPKTFTFFGHTAITDKIEAGLSFISDDIGDGAKKENNIYADFAYVLNLGGKNKLSLGLK CCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCCEEEEEHH AGFSSIQSNFNGFRFTDPQTDFAFSENINATKPNIGVGAYYFRDNLYIGLSAPNLLKSKY HHHHHHHHCCCCEEECCCCCCCEECCCCCCCCCCCCEEEEEEECCEEEEECCCHHHHHHH IEEKSGINAFGAEEIHTFLTAGYVFQVNNMWKIKPAFMSKFVKGAPITLDVTANVLYNEK HHHHCCCCCCCHHHHHHHHHCCEEEEECCEEEECHHHHHHHHCCCCEEEEEEEEEEECCC FEFGAAYRIDDSVSALFNINVTPSLRVGYAYDYTLTNFGQFNSGTHEIMLLFDLDLLGKG CCCCEEEEECCCCEEEEEECCCCCEEEEEEEEEEECCCCCCCCCCEEEEEEEEHHHHCCC FDKSPRFF CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA