| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300028
Identifier: 146300028
GI number: 146300028
Start: 2739154
End: 2741769
Strand: Direct
Name: 146300028
Synonym: Fjoh_2273
Alternate gene names: NA
Gene position: 2739154-2741769 (Clockwise)
Preceding gene: 146300027
Following gene: 146300029
Centisome position: 44.93
GC content: 37.19
Gene sequence:
>2616_bases ATGGCCAAAAACTACATTAATTTCTTACAATTTTTATTGTTTTTTGTTTTTTTAACGGTTTTATCTCCAAAAGTTTATTC GCAATGTGCTGGTAATGAAGGTTCTGTCACAATTTGTGACGTCGAAAATATTGCGAATAGATCAGTTTCTTTATTTTCTT TTTTAGGAGGAAGCCCTGTACCCGGCGGAACATGGTCTGATGATGATGGTTCCAGAGGTTTGAGTACTACAACAGGAATC TTAAATGCCCAAGCTATTAGGGCTGGGGGAACCTATCAATATACATATACAGCTCCTGGCGCGGGATGTGCTGCTAATAC GGCAAAAGTTTTGGTTACAATTGGTGCATTCGAAGGATTTCCAGCTCCATATGCAACAAAATGCAGTGATGAAAACACCT ATAATTTGTTTTCTGCATTTAATAGTACAGTAATCAGTCCGCATACTAATGGAACATGGAGAGATAGTTCAGGTAATGTT ATTCCTCCATTGCTTACTATAACCAACATGAATGGTAATTTTCAATATTCTTATACTGTACCGCCTGTTCCCGGATGCGA TACAGCACCTTTAACAACTTCAATAACACTTACTGTTATCAGGGCGCCGCAACCGGGAACAGGTCGAGATTTACTTTTGT GCGGCACGACTGATTTAGATGGTTATACTGCTTTTGATGTCAGTACTTTATTATCTGGTCAGGACCCTGATGGAAGATGG AGCGGCAGAGGCATAACCTCTCCTTCAAATCCGGTTGTTAATCTTAAACAAGTATTTGCAACATACGGACCTGGCGAGTA TGCTTATAATTATACTGTTTTATCAGACAATGATAATTGCCCGGATAAAACAACAACGATGATAATCACACTCGAAAAAA GATTAGATTTTACCGGAGCCAAAATTGAAATTGAGAAAAATATTTGCGAAGATGAAATAAACACTGCAACCTATACTGCA ACAATTACGCAGGGAGCAGAAGCAATACCAGATAATGAGTACAACGTTACATTTAACGTGTCCGGACCAAATGGCGGAAC AGAAACAATAAAAGCATTTTTTGTAAACGGTAAACTCAGTTTTCCTGTAAATTCTGCTTACTTTAGACAGGTTGGAGTTT TTCATGTAACCGTTACTGGTATTGTTGCTGTAGATAGTAAAGGAGCCTGCCGTAACATCATAAATAATTTAACTACAGAT TTAGAAATTCATACACTGCCTTATTTAGACGGAGCTGTTTTAACTCCGGAACCCACATGCCAAAATAAAAATGCATTAGT ACATCTTACCAATGCCTTACGCTTAGGAGACGGAAATTATAATATTCGATATAATATAACCGGAGATAATTCGGCATTAG GCCAAACGGCAAACATTACAGTTGCGGGCGGCATTTCAACTTTTATAGTTCCGGGAAGTTTAAATATAAAAAGCGGTGTA TCAACTATTACTATTACGAATATTACAAACACAGCAACAGGCTGTACAAATACTGCCACAATTAGAGGAGACTTAATTAT TAATCCTTTGCCCAATGCTGCAACAGTAAATGTTGTTGTAAATGATTATTGTTTAAACGATCCGGTTACGGTAACAGTTT CGGGATTAGGAACATTGACCGATGTTACAGTATCTTATATGCTTCAGGATAGTAATTTAAGTACTTTAGAATCTGTTGCC CTGTCTGTCACTAACGGAAAAGCCGATTTTGTAATACCTGCCAGCTTGCTTTTAAACACAGGATCGACAATTATATCGGT TTTGAATTTGAAAAATAATATTACCAATTGCGATGTCAATCTAAACAACGTTTTAGATAGTTTTATAATACATCCAATTC CGGTAAAACCAACTGTTAGTCCATTGTCATTTTGTAAAGTCGATGAAGTAGCGGTAGAAAACTTAACTCCAAAAGGAAAC CAGTATAAATGGTACGATTCAGCAACAGCGACAACGCCCCTTGCAGGTACAACAGTTTTACAATCTGGGAATTACTATGT TAGAGAAACTTCAGTGGCTGGATGTACATCTGAACCTGCAGAAGTTCCGGTTACAATAAACGATTCTCCCGTTCCTGTAC TAAATTCAGACGGGCAGAATTTCTGCGGATTAACTAATCCAACTATTGGAGATTTGTCAAACAATACCAACATACCTGCA ACAGTAGTCTGGTATGATGCACCTGATAACGGCAATCTGCTTTCAGCTTCAACTCGTTTGACTGAGCAGGGAAGATATTA TGGATTTAACTTTCCAAATTCGGCTTGTTTTTCTTCAGAATATATTGAAGTTACTGTTGCATTAACAGATTGTGACAATG TGCCGAACGACTTTTTTATTCCCGATGGGTTTTCACCAAATGGAGACGGTATAAATGATTCATTTGTTATTAAAGATATT GAATTTCTATATCCAAATTATACACTTGAAATTTTTAATAGATACGGAAACGGAATGTATAAAGGAGATAAAAATAAACC CGCCTGGGACGGAATGAATTACGAAAAGAGCGGTATTGCCGGCGGTGTTGCGCCAAATGGAGTTTATTTTTATGTATTGC ATTTTAATAAAGATAACAAACCGCCAAAACAAGGCCGTCTTTATTTAAATCGATAA
Upstream 100 bases:
>100_bases TTACATCTTAATATCTATATATTTAAAAAATTAATAAGAAAATTAAGTTTTTTTAGAAAGTAAGCACATATTTTATTATG TTTAACCAAAATAATAATTT
Downstream 100 bases:
>100_bases ATCTCTTTTTTATATTATTTAATATAATTTTCAAATGAAAAAAATACTACTCCTTATAAATTTCCTCTTTTACTTATCAG TTTCTGCGCAGCAAGATCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 871; Mature: 870
Protein sequence:
>871_residues MAKNYINFLQFLLFFVFLTVLSPKVYSQCAGNEGSVTICDVENIANRSVSLFSFLGGSPVPGGTWSDDDGSRGLSTTTGI LNAQAIRAGGTYQYTYTAPGAGCAANTAKVLVTIGAFEGFPAPYATKCSDENTYNLFSAFNSTVISPHTNGTWRDSSGNV IPPLLTITNMNGNFQYSYTVPPVPGCDTAPLTTSITLTVIRAPQPGTGRDLLLCGTTDLDGYTAFDVSTLLSGQDPDGRW SGRGITSPSNPVVNLKQVFATYGPGEYAYNYTVLSDNDNCPDKTTTMIITLEKRLDFTGAKIEIEKNICEDEINTATYTA TITQGAEAIPDNEYNVTFNVSGPNGGTETIKAFFVNGKLSFPVNSAYFRQVGVFHVTVTGIVAVDSKGACRNIINNLTTD LEIHTLPYLDGAVLTPEPTCQNKNALVHLTNALRLGDGNYNIRYNITGDNSALGQTANITVAGGISTFIVPGSLNIKSGV STITITNITNTATGCTNTATIRGDLIINPLPNAATVNVVVNDYCLNDPVTVTVSGLGTLTDVTVSYMLQDSNLSTLESVA LSVTNGKADFVIPASLLLNTGSTIISVLNLKNNITNCDVNLNNVLDSFIIHPIPVKPTVSPLSFCKVDEVAVENLTPKGN QYKWYDSATATTPLAGTTVLQSGNYYVRETSVAGCTSEPAEVPVTINDSPVPVLNSDGQNFCGLTNPTIGDLSNNTNIPA TVVWYDAPDNGNLLSASTRLTEQGRYYGFNFPNSACFSSEYIEVTVALTDCDNVPNDFFIPDGFSPNGDGINDSFVIKDI EFLYPNYTLEIFNRYGNGMYKGDKNKPAWDGMNYEKSGIAGGVAPNGVYFYVLHFNKDNKPPKQGRLYLNR
Sequences:
>Translated_871_residues MAKNYINFLQFLLFFVFLTVLSPKVYSQCAGNEGSVTICDVENIANRSVSLFSFLGGSPVPGGTWSDDDGSRGLSTTTGI LNAQAIRAGGTYQYTYTAPGAGCAANTAKVLVTIGAFEGFPAPYATKCSDENTYNLFSAFNSTVISPHTNGTWRDSSGNV IPPLLTITNMNGNFQYSYTVPPVPGCDTAPLTTSITLTVIRAPQPGTGRDLLLCGTTDLDGYTAFDVSTLLSGQDPDGRW SGRGITSPSNPVVNLKQVFATYGPGEYAYNYTVLSDNDNCPDKTTTMIITLEKRLDFTGAKIEIEKNICEDEINTATYTA TITQGAEAIPDNEYNVTFNVSGPNGGTETIKAFFVNGKLSFPVNSAYFRQVGVFHVTVTGIVAVDSKGACRNIINNLTTD LEIHTLPYLDGAVLTPEPTCQNKNALVHLTNALRLGDGNYNIRYNITGDNSALGQTANITVAGGISTFIVPGSLNIKSGV STITITNITNTATGCTNTATIRGDLIINPLPNAATVNVVVNDYCLNDPVTVTVSGLGTLTDVTVSYMLQDSNLSTLESVA LSVTNGKADFVIPASLLLNTGSTIISVLNLKNNITNCDVNLNNVLDSFIIHPIPVKPTVSPLSFCKVDEVAVENLTPKGN QYKWYDSATATTPLAGTTVLQSGNYYVRETSVAGCTSEPAEVPVTINDSPVPVLNSDGQNFCGLTNPTIGDLSNNTNIPA TVVWYDAPDNGNLLSASTRLTEQGRYYGFNFPNSACFSSEYIEVTVALTDCDNVPNDFFIPDGFSPNGDGINDSFVIKDI EFLYPNYTLEIFNRYGNGMYKGDKNKPAWDGMNYEKSGIAGGVAPNGVYFYVLHFNKDNKPPKQGRLYLNR >Mature_870_residues AKNYINFLQFLLFFVFLTVLSPKVYSQCAGNEGSVTICDVENIANRSVSLFSFLGGSPVPGGTWSDDDGSRGLSTTTGIL NAQAIRAGGTYQYTYTAPGAGCAANTAKVLVTIGAFEGFPAPYATKCSDENTYNLFSAFNSTVISPHTNGTWRDSSGNVI PPLLTITNMNGNFQYSYTVPPVPGCDTAPLTTSITLTVIRAPQPGTGRDLLLCGTTDLDGYTAFDVSTLLSGQDPDGRWS GRGITSPSNPVVNLKQVFATYGPGEYAYNYTVLSDNDNCPDKTTTMIITLEKRLDFTGAKIEIEKNICEDEINTATYTAT ITQGAEAIPDNEYNVTFNVSGPNGGTETIKAFFVNGKLSFPVNSAYFRQVGVFHVTVTGIVAVDSKGACRNIINNLTTDL EIHTLPYLDGAVLTPEPTCQNKNALVHLTNALRLGDGNYNIRYNITGDNSALGQTANITVAGGISTFIVPGSLNIKSGVS TITITNITNTATGCTNTATIRGDLIINPLPNAATVNVVVNDYCLNDPVTVTVSGLGTLTDVTVSYMLQDSNLSTLESVAL SVTNGKADFVIPASLLLNTGSTIISVLNLKNNITNCDVNLNNVLDSFIIHPIPVKPTVSPLSFCKVDEVAVENLTPKGNQ YKWYDSATATTPLAGTTVLQSGNYYVRETSVAGCTSEPAEVPVTINDSPVPVLNSDGQNFCGLTNPTIGDLSNNTNIPAT VVWYDAPDNGNLLSASTRLTEQGRYYGFNFPNSACFSSEYIEVTVALTDCDNVPNDFFIPDGFSPNGDGINDSFVIKDIE FLYPNYTLEIFNRYGNGMYKGDKNKPAWDGMNYEKSGIAGGVAPNGVYFYVLHFNKDNKPPKQGRLYLNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 93287; Mature: 93156
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKNYINFLQFLLFFVFLTVLSPKVYSQCAGNEGSVTICDVENIANRSVSLFSFLGGSPV CCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEEHHHHCCCCEEEHHHHCCCCC PGGTWSDDDGSRGLSTTTGILNAQAIRAGGTYQYTYTAPGAGCAANTAKVLVTIGAFEGF CCCCCCCCCCCCCCCHHHCEEEEEEEECCCEEEEEEECCCCCCCCCCEEEEEEEECCCCC PAPYATKCSDENTYNLFSAFNSTVISPHTNGTWRDSSGNVIPPLLTITNMNGNFQYSYTV CCCCCCCCCCCCCCHHHHHCCCCEECCCCCCCEECCCCCCCCCEEEEEECCCCEEEEEEC PPVPGCDTAPLTTSITLTVIRAPQPGTGRDLLLCGTTDLDGYTAFDVSTLLSGQDPDGRW CCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEECCCCCCEEEEEHHHHHCCCCCCCCC SGRGITSPSNPVVNLKQVFATYGPGEYAYNYTVLSDNDNCPDKTTTMIITLEKRLDFTGA CCCCCCCCCCCCEEHHHHHHHCCCCCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCC KIEIEKNICEDEINTATYTATITQGAEAIPDNEYNVTFNVSGPNGGTETIKAFFVNGKLS EEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCEEE FPVNSAYFRQVGVFHVTVTGIVAVDSKGACRNIINNLTTDLEIHTLPYLDGAVLTPEPTC CCCCHHHHHHEEEEEEEEEEEEEECCCCHHHHHHHHCCCCEEEEEECCCCCEEECCCCCC QNKNALVHLTNALRLGDGNYNIRYNITGDNSALGQTANITVAGGISTFIVPGSLNIKSGV CCCCEEEEEEEEEEECCCCEEEEEEECCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCC STITITNITNTATGCTNTATIRGDLIINPLPNAATVNVVVNDYCLNDPVTVTVSGLGTLT CEEEEEECCCCCCCCCCEEEEEEEEEEECCCCCEEEEEEEEEEECCCCEEEEEECCCCHH DVTVSYMLQDSNLSTLESVALSVTNGKADFVIPASLLLNTGSTIISVLNLKNNITNCDVN EEEEEEEEECCCCCCCEEEEEEEECCCCEEEEEHHHHHCCCCHHEEEEECCCCCEEEEEE LNNVLDSFIIHPIPVKPTVSPLSFCKVDEVAVENLTPKGNQYKWYDSATATTPLAGTTVL HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCEEEE QSGNYYVRETSVAGCTSEPAEVPVTINDSPVPVLNSDGQNFCGLTNPTIGDLSNNTNIPA ECCCEEEEEEEECCCCCCCCEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCE TVVWYDAPDNGNLLSASTRLTEQGRYYGFNFPNSACFSSEYIEVTVALTDCDNVPNDFFI EEEEEECCCCCCEEEECHHHCCCCCEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCEEC PDGFSPNGDGINDSFVIKDIEFLYPNYTLEIFNRYGNGMYKGDKNKPAWDGMNYEKSGIA CCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEHHHCCCEEECCCCCCCCCCCCCCCCCCC GGVAPNGVYFYVLHFNKDNKPPKQGRLYLNR CCCCCCCEEEEEEEECCCCCCHHHCCEEECC >Mature Secondary Structure AKNYINFLQFLLFFVFLTVLSPKVYSQCAGNEGSVTICDVENIANRSVSLFSFLGGSPV CCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEEHHHHCCCCEEEHHHHCCCCC PGGTWSDDDGSRGLSTTTGILNAQAIRAGGTYQYTYTAPGAGCAANTAKVLVTIGAFEGF CCCCCCCCCCCCCCCHHHCEEEEEEEECCCEEEEEEECCCCCCCCCCEEEEEEEECCCCC PAPYATKCSDENTYNLFSAFNSTVISPHTNGTWRDSSGNVIPPLLTITNMNGNFQYSYTV CCCCCCCCCCCCCCHHHHHCCCCEECCCCCCCEECCCCCCCCCEEEEEECCCCEEEEEEC PPVPGCDTAPLTTSITLTVIRAPQPGTGRDLLLCGTTDLDGYTAFDVSTLLSGQDPDGRW CCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEECCCCCCEEEEEHHHHHCCCCCCCCC SGRGITSPSNPVVNLKQVFATYGPGEYAYNYTVLSDNDNCPDKTTTMIITLEKRLDFTGA CCCCCCCCCCCCEEHHHHHHHCCCCCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCC KIEIEKNICEDEINTATYTATITQGAEAIPDNEYNVTFNVSGPNGGTETIKAFFVNGKLS EEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCEEE FPVNSAYFRQVGVFHVTVTGIVAVDSKGACRNIINNLTTDLEIHTLPYLDGAVLTPEPTC CCCCHHHHHHEEEEEEEEEEEEEECCCCHHHHHHHHCCCCEEEEEECCCCCEEECCCCCC QNKNALVHLTNALRLGDGNYNIRYNITGDNSALGQTANITVAGGISTFIVPGSLNIKSGV CCCCEEEEEEEEEEECCCCEEEEEEECCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCC STITITNITNTATGCTNTATIRGDLIINPLPNAATVNVVVNDYCLNDPVTVTVSGLGTLT CEEEEEECCCCCCCCCCEEEEEEEEEEECCCCCEEEEEEEEEEECCCCEEEEEECCCCHH DVTVSYMLQDSNLSTLESVALSVTNGKADFVIPASLLLNTGSTIISVLNLKNNITNCDVN EEEEEEEEECCCCCCCEEEEEEEECCCCEEEEEHHHHHCCCCHHEEEEECCCCCEEEEEE LNNVLDSFIIHPIPVKPTVSPLSFCKVDEVAVENLTPKGNQYKWYDSATATTPLAGTTVL HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCEEEE QSGNYYVRETSVAGCTSEPAEVPVTINDSPVPVLNSDGQNFCGLTNPTIGDLSNNTNIPA ECCCEEEEEEEECCCCCCCCEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCE TVVWYDAPDNGNLLSASTRLTEQGRYYGFNFPNSACFSSEYIEVTVALTDCDNVPNDFFI EEEEEECCCCCCEEEECHHHCCCCCEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCEEC PDGFSPNGDGINDSFVIKDIEFLYPNYTLEIFNRYGNGMYKGDKNKPAWDGMNYEKSGIA CCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEHHHCCCEEECCCCCCCCCCCCCCCCCCC GGVAPNGVYFYVLHFNKDNKPPKQGRLYLNR CCCCCCCEEEEEEEECCCCCCHHHCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA