| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
Click here to switch to the map view.
The map label for this gene is folE
Identifier: 146300025
GI number: 146300025
Start: 2735506
End: 2736177
Strand: Reverse
Name: folE
Synonym: Fjoh_2270
Alternate gene names: 146300025
Gene position: 2736177-2735506 (Counterclockwise)
Preceding gene: 146300026
Following gene: 146300024
Centisome position: 44.88
GC content: 33.93
Gene sequence:
>672_bases ATGATAAATAACGAAGATTTTTTAGACGAAATAGGTGACAGTCATTTCAGCAGTAATGCAAAAAACCCTTTAAGAGAGGA TGCTTTTGATATAACTGATGAAGAAAAAATAGAAAAAATTAAAAAAGATGTTGAAAACATTCTTCAGACTCTTGGAATGG ATTTAACAGATGACAGCATAAAAGGTACTCCAAACCGAGTAGCTAAAATGTTTGTAAAAGAAATTTTTGGAGGTTTAAAT CCTGCAAAACAGCCAAAAGCCTCAACTTTTGACAATAATTACAAATATGGCGAAATGCTGGTAGAAAAAAACATTACCGT TTATTCTACCTGTGAACACCACTTACTGCCAATTATAGGACGTGCTCACGTTGCTTATATTTCAAGCGGAAGAGTTATTG GTTTATCAAAAATGAACCGTATCGTTGAGTATTATGCTAAAAGACCTCAGGTACAAGAGCGTTTAACAATGCAGATTGTT CAGGAACTTCAAAAAGCTTTAGGAACAGAAGATGTAGCCTGCGTTATCGATGCAAAACACCTTTGTGTTAACTCAAGAGG AATCAAAGATATCGAAAGCAGTACTGTAACTTCTGAATTCGGCGGAAAATTCAAAGATCCTCAAACAAAAAGAGAATTTC TTGATTACATTAAACTAGATACACAGTTCTAA
Upstream 100 bases:
>100_bases AAAGGATCGATTAAATAATAAAAACGATAGAAAAGGTTTCCCATTTATTAATTATCTTTACCGCCTTAAAAAGATATACC CATTATAATAGTAGTTTTTA
Downstream 100 bases:
>100_bases AAGTTTATTGTTTTTAGTTAATAGTTTATTGTTCTTATGGCGAAAATTGAAAAATTTGAAGATCTGGAAATCTGGAGACT TGCTCGAGAAATTTGTCAGC
Product: GTP cyclohydrolase I
Products: NA
Alternate protein names: GTP cyclohydrolase I; GTP-CH-I
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MINNEDFLDEIGDSHFSSNAKNPLREDAFDITDEEKIEKIKKDVENILQTLGMDLTDDSIKGTPNRVAKMFVKEIFGGLN PAKQPKASTFDNNYKYGEMLVEKNITVYSTCEHHLLPIIGRAHVAYISSGRVIGLSKMNRIVEYYAKRPQVQERLTMQIV QELQKALGTEDVACVIDAKHLCVNSRGIKDIESSTVTSEFGGKFKDPQTKREFLDYIKLDTQF
Sequences:
>Translated_223_residues MINNEDFLDEIGDSHFSSNAKNPLREDAFDITDEEKIEKIKKDVENILQTLGMDLTDDSIKGTPNRVAKMFVKEIFGGLN PAKQPKASTFDNNYKYGEMLVEKNITVYSTCEHHLLPIIGRAHVAYISSGRVIGLSKMNRIVEYYAKRPQVQERLTMQIV QELQKALGTEDVACVIDAKHLCVNSRGIKDIESSTVTSEFGGKFKDPQTKREFLDYIKLDTQF >Mature_223_residues MINNEDFLDEIGDSHFSSNAKNPLREDAFDITDEEKIEKIKKDVENILQTLGMDLTDDSIKGTPNRVAKMFVKEIFGGLN PAKQPKASTFDNNYKYGEMLVEKNITVYSTCEHHLLPIIGRAHVAYISSGRVIGLSKMNRIVEYYAKRPQVQERLTMQIV QELQKALGTEDVACVIDAKHLCVNSRGIKDIESSTVTSEFGGKFKDPQTKREFLDYIKLDTQF
Specific function: Tetrahydrofolate biosynthesis; first step. [C]
COG id: COG0302
COG function: function code H; GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family
Homologues:
Organism=Homo sapiens, GI66932968, Length=181, Percent_Identity=39.7790055248619, Blast_Score=128, Evalue=4e-30, Organism=Homo sapiens, GI4503949, Length=181, Percent_Identity=39.7790055248619, Blast_Score=128, Evalue=4e-30, Organism=Homo sapiens, GI66932970, Length=169, Percent_Identity=34.3195266272189, Blast_Score=95, Evalue=6e-20, Organism=Homo sapiens, GI66932972, Length=140, Percent_Identity=38.5714285714286, Blast_Score=93, Evalue=1e-19, Organism=Escherichia coli, GI1788476, Length=199, Percent_Identity=49.2462311557789, Blast_Score=189, Evalue=2e-49, Organism=Caenorhabditis elegans, GI17560486, Length=223, Percent_Identity=36.322869955157, Blast_Score=137, Evalue=4e-33, Organism=Saccharomyces cerevisiae, GI6321706, Length=189, Percent_Identity=39.6825396825397, Blast_Score=135, Evalue=5e-33, Organism=Drosophila melanogaster, GI24656782, Length=221, Percent_Identity=34.841628959276, Blast_Score=112, Evalue=2e-25, Organism=Drosophila melanogaster, GI24656796, Length=209, Percent_Identity=34.9282296650718, Blast_Score=112, Evalue=2e-25, Organism=Drosophila melanogaster, GI24656791, Length=197, Percent_Identity=34.010152284264, Blast_Score=111, Evalue=4e-25,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): GCH1_FLAJ1 (A5FHM7)
Other databases:
- EMBL: CP000685 - RefSeq: YP_001194616.1 - ProteinModelPortal: A5FHM7 - SMR: A5FHM7 - STRING: A5FHM7 - GeneID: 5094405 - GenomeReviews: CP000685_GR - KEGG: fjo:Fjoh_2270 - eggNOG: COG0302 - HOGENOM: HBG370191 - OMA: RSRQEFF - ProtClustDB: CLSK847441 - BioCyc: FJOH376686:FJOH_2270-MONOMER - GO: GO:0005737 - HAMAP: MF_00223 - InterPro: IPR001474 - InterPro: IPR020602 - InterPro: IPR018234 - TIGRFAMs: TIGR00063
Pfam domain/function: PF01227 GTP_cyclohydroI
EC number: =3.5.4.16
Molecular weight: Translated: 25313; Mature: 25313
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: PS00859 GTP_CYCLOHYDROL_1_1; PS00860 GTP_CYCLOHYDROL_1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINNEDFLDEIGDSHFSSNAKNPLREDAFDITDEEKIEKIKKDVENILQTLGMDLTDDSI CCCCHHHHHHHCCHHHCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC KGTPNRVAKMFVKEIFGGLNPAKQPKASTFDNNYKYGEMLVEKNITVYSTCEHHLLPIIG CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEECCHHHHHHHHH RAHVAYISSGRVIGLSKMNRIVEYYAKRPQVQERLTMQIVQELQKALGTEDVACVIDAKH HHHHEEECCCCEECHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECHHH LCVNSRGIKDIESSTVTSEFGGKFKDPQTKREFLDYIKLDTQF HHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MINNEDFLDEIGDSHFSSNAKNPLREDAFDITDEEKIEKIKKDVENILQTLGMDLTDDSI CCCCHHHHHHHCCHHHCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC KGTPNRVAKMFVKEIFGGLNPAKQPKASTFDNNYKYGEMLVEKNITVYSTCEHHLLPIIG CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEECCHHHHHHHHH RAHVAYISSGRVIGLSKMNRIVEYYAKRPQVQERLTMQIVQELQKALGTEDVACVIDAKH HHHHEEECCCCEECHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECHHH LCVNSRGIKDIESSTVTSEFGGKFKDPQTKREFLDYIKLDTQF HHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA