Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is 146300019

Identifier: 146300019

GI number: 146300019

Start: 2729029

End: 2730189

Strand: Direct

Name: 146300019

Synonym: Fjoh_2263

Alternate gene names: NA

Gene position: 2729029-2730189 (Clockwise)

Preceding gene: 146300018

Following gene: 146300020

Centisome position: 44.76

GC content: 25.67

Gene sequence:

>1161_bases
ATGAAAACATATAATTTATTACTATTTTGTTTTTTTACATTTTTTTTAAGCTGTAAAGACAAAGTAAATGATGAAAAAAT
AGTCAACAATCAAAAAAAAGATAGTTTAAATATTGATGTAGCAGAAATAAAAAAAATAATACAGCTTCAGAAAAATGCAA
ATTATATAGATTACCGTCCTGATAATCCTTATCTCCCTACAGAAAAAGATCTTCTGATTCTTATTCCATTTGTGGAGCAG
GAATTAAAAAAAGCGGGCTATAAAACTTTACCAAGTAATCAGTTTGAAAGCAGAATAAAAAATCTTGTAAAAGATAATAA
AACCAAAAACTACAATTCTTTTACTACAATTTTTTTAAATAAACTGGATAGGACGGATAAAACATTAAATGAATTTGAAT
TTGATTTAAATAATCAATTTGCTGTTAAAAAATATAATTTTATGACTCCAATGCTGTTTTTGGAAGATGTTATAAAAATT
AAAAAAGATAACAGCTATTCAATTAGTGTTCCTCATTATATAATTGCAAGAAATAAATATTTATTCAATGACAGCAAATC
TGATTTGGACTGGCTTCTTGTTAATGATCAGGATTTTTTAAAAAGTTTAGTTAATTCTTTAGGATATGATAAAGAACCCC
GAATAAATAAATTGTTGTTGGAAGATTATTATAAAATGCTTAGTACATCAAAGCCTTCTAAAAAAGAAAAAATAGGAGCA
TTTTTCTTTACAATAGATCTCAATAATAATTTTTGTATTAGGCAAGGTTTGATTGATTATGTGAAAAATAATACTACTGT
AAATGATAATAGACTTTTATATGCTTTAGACGATTATTCTTATGCTTTATATGGCGATAATTTGAATAAAATTTATGGAA
GCGATGATCCTGCTAAAATGTTTAATGATGTAGATAAAGCTCATATTGTTGCTGTAATTGCAAGTATTGAGGTTCCTGCA
ATTGTAAAGTATAAATCAGAGAATCCGGAATTATGGAATAATGTGGTATCAGCACTTTATAATCTTCTTGTGGCACATCC
TGAAATAAAAGATATTATAATAAAAAACAATTATTTTGGTATAAAGAACATGAAGCAGGTTTTAGAGGACACTATTGATG
AAATTGATGTGGATAAAATTAAAAGAGGTGAAGATTTCTAG

Upstream 100 bases:

>100_bases
GAAGATTTTAATTTTTGGAATTCTTAATAGATTTCATCAATTAACACATGAGAGTATACTGTTGGGTACATATTCAAACA
AGATAAAAAATAGATATTTT

Downstream 100 bases:

>100_bases
ATTATGAAAAAAGATGCCTTACTACTACTTTGTTTTTTTGCATTTTTTTTAAGCTGTAAAGACAAAGTAAATGATGAAAA
AATAGTCTACATTCAAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MKTYNLLLFCFFTFFLSCKDKVNDEKIVNNQKKDSLNIDVAEIKKIIQLQKNANYIDYRPDNPYLPTEKDLLILIPFVEQ
ELKKAGYKTLPSNQFESRIKNLVKDNKTKNYNSFTTIFLNKLDRTDKTLNEFEFDLNNQFAVKKYNFMTPMLFLEDVIKI
KKDNSYSISVPHYIIARNKYLFNDSKSDLDWLLVNDQDFLKSLVNSLGYDKEPRINKLLLEDYYKMLSTSKPSKKEKIGA
FFFTIDLNNNFCIRQGLIDYVKNNTTVNDNRLLYALDDYSYALYGDNLNKIYGSDDPAKMFNDVDKAHIVAVIASIEVPA
IVKYKSENPELWNNVVSALYNLLVAHPEIKDIIIKNNYFGIKNMKQVLEDTIDEIDVDKIKRGEDF

Sequences:

>Translated_386_residues
MKTYNLLLFCFFTFFLSCKDKVNDEKIVNNQKKDSLNIDVAEIKKIIQLQKNANYIDYRPDNPYLPTEKDLLILIPFVEQ
ELKKAGYKTLPSNQFESRIKNLVKDNKTKNYNSFTTIFLNKLDRTDKTLNEFEFDLNNQFAVKKYNFMTPMLFLEDVIKI
KKDNSYSISVPHYIIARNKYLFNDSKSDLDWLLVNDQDFLKSLVNSLGYDKEPRINKLLLEDYYKMLSTSKPSKKEKIGA
FFFTIDLNNNFCIRQGLIDYVKNNTTVNDNRLLYALDDYSYALYGDNLNKIYGSDDPAKMFNDVDKAHIVAVIASIEVPA
IVKYKSENPELWNNVVSALYNLLVAHPEIKDIIIKNNYFGIKNMKQVLEDTIDEIDVDKIKRGEDF
>Mature_386_residues
MKTYNLLLFCFFTFFLSCKDKVNDEKIVNNQKKDSLNIDVAEIKKIIQLQKNANYIDYRPDNPYLPTEKDLLILIPFVEQ
ELKKAGYKTLPSNQFESRIKNLVKDNKTKNYNSFTTIFLNKLDRTDKTLNEFEFDLNNQFAVKKYNFMTPMLFLEDVIKI
KKDNSYSISVPHYIIARNKYLFNDSKSDLDWLLVNDQDFLKSLVNSLGYDKEPRINKLLLEDYYKMLSTSKPSKKEKIGA
FFFTIDLNNNFCIRQGLIDYVKNNTTVNDNRLLYALDDYSYALYGDNLNKIYGSDDPAKMFNDVDKAHIVAVIASIEVPA
IVKYKSENPELWNNVVSALYNLLVAHPEIKDIIIKNNYFGIKNMKQVLEDTIDEIDVDKIKRGEDF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45158; Mature: 45158

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTYNLLLFCFFTFFLSCKDKVNDEKIVNNQKKDSLNIDVAEIKKIIQLQKNANYIDYRP
CCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECC
DNPYLPTEKDLLILIPFVEQELKKAGYKTLPSNQFESRIKNLVKDNKTKNYNSFTTIFLN
CCCCCCCCCCEEEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHH
KLDRTDKTLNEFEFDLNNQFAVKKYNFMTPMLFLEDVIKIKKDNSYSISVPHYIIARNKY
HHCCCHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEECCCE
LFNDSKSDLDWLLVNDQDFLKSLVNSLGYDKEPRINKLLLEDYYKMLSTSKPSKKEKIGA
EECCCCCCCCEEEECCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHCCEE
FFFTIDLNNNFCIRQGLIDYVKNNTTVNDNRLLYALDDYSYALYGDNLNKIYGSDDPAKM
EEEEEECCCCEEHHHHHHHHHHCCCEECCCEEEEEEECCEEEEECCCCCCCCCCCCHHHH
FNDVDKAHIVAVIASIEVPAIVKYKSENPELWNNVVSALYNLLVAHPEIKDIIIKNNYFG
HHCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHEEEEECCCCC
IKNMKQVLEDTIDEIDVDKIKRGEDF
HHHHHHHHHHHHHHCCHHHHHCCCCC
>Mature Secondary Structure
MKTYNLLLFCFFTFFLSCKDKVNDEKIVNNQKKDSLNIDVAEIKKIIQLQKNANYIDYRP
CCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECC
DNPYLPTEKDLLILIPFVEQELKKAGYKTLPSNQFESRIKNLVKDNKTKNYNSFTTIFLN
CCCCCCCCCCEEEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHH
KLDRTDKTLNEFEFDLNNQFAVKKYNFMTPMLFLEDVIKIKKDNSYSISVPHYIIARNKY
HHCCCHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEECCCE
LFNDSKSDLDWLLVNDQDFLKSLVNSLGYDKEPRINKLLLEDYYKMLSTSKPSKKEKIGA
EECCCCCCCCEEEECCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHCCEE
FFFTIDLNNNFCIRQGLIDYVKNNTTVNDNRLLYALDDYSYALYGDNLNKIYGSDDPAKM
EEEEEECCCCEEHHHHHHHHHHCCCEECCCEEEEEEECCEEEEECCCCCCCCCCCCHHHH
FNDVDKAHIVAVIASIEVPAIVKYKSENPELWNNVVSALYNLLVAHPEIKDIIIKNNYFG
HHCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHEEEEECCCCC
IKNMKQVLEDTIDEIDVDKIKRGEDF
HHHHHHHHHHHHHHCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA