| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300014
Identifier: 146300014
GI number: 146300014
Start: 2722903
End: 2723901
Strand: Direct
Name: 146300014
Synonym: Fjoh_2258
Alternate gene names: NA
Gene position: 2722903-2723901 (Clockwise)
Preceding gene: 146300013
Following gene: 146300015
Centisome position: 44.66
GC content: 31.83
Gene sequence:
>999_bases ATGGTAAAAAAACATGTATTGAGTCTTATTGATATCAGGCTCATTGTATTCTTAATTGTAATTGTGGCACTGTGTGCTAT TCTAACCCTGCTGATTAGTGATAAAGTAGAAGATTTTGCGAAAAAGTACAAAAAGAAATTTTATGGATATATCTTATTAT TTGTTTTAATCTATACCCTTATAGCATTTTTAGGATACAATAAACTCTTTATTGAACTTAGAAATGAATTTATTTTTTAT CAGGCAGCTTCTTTGTTATTAGGAAGTTTACATGCATGGTTCTATCGTGAATTTTTTCAGGAGTTTAATCTAAAAAAATA TAGTGTTGAGTTACTATTTTCTTTTATCGTTCCGCTGTATTCAAGCATTTTATTTGTCATTATTTATACATTTTTAAACG GAATAAATTTTACGCTTTTAATGAGCGCGCATTTTTTGGTCTTCGTTATTCCAACTTGTATCTATATGGTATTTTGTTTT ATGATGCTGATACCGCCAAGAAAATATATTACATGGACCCCCGAAAAATCGTATTCAGCAATAAAAGACGACGAAATGGA GGCTATTGTATTGATTACTTTTTTAATAAAGAAAAGTTACGATGATACAGAATATACTTCAATAAGAGTACAAGCCCCTG TGAAAGTAAGTTTTGGACGCTTGTTTTTTCTTGCCGTTGCAGGATATAACAGGCAAAACGAAGGTGAACATATCGATTTG CAGATGCCTGATGGAAAAGACTATAACTGGGTATTTTATTTACAGTCTAAATGGTATGAAAACACCCGCTATATAGATGC TGCATACGATGGAGCAATGAATCAAATTACAGAAAACTCAGTAGTAATATGCCAGCGTGAAATTGAGAAAAATGCACCTC CGGAAAAAAAGAAAAAAACAGATCAAAAACTGTATGGTGTCGATTCGCATAATGAGGGGGCTGATCAGGAAAAGTTTGAC GAATTAAAAGAAACAGAAAAGGAAGCAGCTATAAAATAA
Upstream 100 bases:
>100_bases TTTTATTTAAATGAAATAAAAAGACTACATTAGTCGCAATAACAAAGTGTAGGTTATAATCTACATTTTGTTTTAGTGAA TTTATATATGATAGTTTGAA
Downstream 100 bases:
>100_bases TCTTTGGAATCAATAAACATTTAAAAATTTAACCGCCGTTAACGAATATGGAAAAAAACGAAGACAAAGAAAAAAAGAAA CAACAGGTTTTATTTGTAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MVKKHVLSLIDIRLIVFLIVIVALCAILTLLISDKVEDFAKKYKKKFYGYILLFVLIYTLIAFLGYNKLFIELRNEFIFY QAASLLLGSLHAWFYREFFQEFNLKKYSVELLFSFIVPLYSSILFVIIYTFLNGINFTLLMSAHFLVFVIPTCIYMVFCF MMLIPPRKYITWTPEKSYSAIKDDEMEAIVLITFLIKKSYDDTEYTSIRVQAPVKVSFGRLFFLAVAGYNRQNEGEHIDL QMPDGKDYNWVFYLQSKWYENTRYIDAAYDGAMNQITENSVVICQREIEKNAPPEKKKKTDQKLYGVDSHNEGADQEKFD ELKETEKEAAIK
Sequences:
>Translated_332_residues MVKKHVLSLIDIRLIVFLIVIVALCAILTLLISDKVEDFAKKYKKKFYGYILLFVLIYTLIAFLGYNKLFIELRNEFIFY QAASLLLGSLHAWFYREFFQEFNLKKYSVELLFSFIVPLYSSILFVIIYTFLNGINFTLLMSAHFLVFVIPTCIYMVFCF MMLIPPRKYITWTPEKSYSAIKDDEMEAIVLITFLIKKSYDDTEYTSIRVQAPVKVSFGRLFFLAVAGYNRQNEGEHIDL QMPDGKDYNWVFYLQSKWYENTRYIDAAYDGAMNQITENSVVICQREIEKNAPPEKKKKTDQKLYGVDSHNEGADQEKFD ELKETEKEAAIK >Mature_332_residues MVKKHVLSLIDIRLIVFLIVIVALCAILTLLISDKVEDFAKKYKKKFYGYILLFVLIYTLIAFLGYNKLFIELRNEFIFY QAASLLLGSLHAWFYREFFQEFNLKKYSVELLFSFIVPLYSSILFVIIYTFLNGINFTLLMSAHFLVFVIPTCIYMVFCF MMLIPPRKYITWTPEKSYSAIKDDEMEAIVLITFLIKKSYDDTEYTSIRVQAPVKVSFGRLFFLAVAGYNRQNEGEHIDL QMPDGKDYNWVFYLQSKWYENTRYIDAAYDGAMNQITENSVVICQREIEKNAPPEKKKKTDQKLYGVDSHNEGADQEKFD ELKETEKEAAIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38981; Mature: 38981
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKKHVLSLIDIRLIVFLIVIVALCAILTLLISDKVEDFAKKYKKKFYGYILLFVLIYTL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAFLGYNKLFIELRNEFIFYQAASLLLGSLHAWFYREFFQEFNLKKYSVELLFSFIVPLY HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH SSILFVIIYTFLNGINFTLLMSAHFLVFVIPTCIYMVFCFMMLIPPRKYITWTPEKSYSA HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCC IKDDEMEAIVLITFLIKKSYDDTEYTSIRVQAPVKVSFGRLFFLAVAGYNRQNEGEHIDL CCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEHHHHHHHHHHHCCCCCCCCCEEEE QMPDGKDYNWVFYLQSKWYENTRYIDAAYDGAMNQITENSVVICQREIEKNAPPEKKKKT ECCCCCCCCEEEEEECCCCCCCEEEEHHHHHHHHHHCCCCEEEEEHHHHCCCCCCHHHHH DQKLYGVDSHNEGADQEKFDELKETEKEAAIK HHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVKKHVLSLIDIRLIVFLIVIVALCAILTLLISDKVEDFAKKYKKKFYGYILLFVLIYTL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAFLGYNKLFIELRNEFIFYQAASLLLGSLHAWFYREFFQEFNLKKYSVELLFSFIVPLY HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH SSILFVIIYTFLNGINFTLLMSAHFLVFVIPTCIYMVFCFMMLIPPRKYITWTPEKSYSA HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCC IKDDEMEAIVLITFLIKKSYDDTEYTSIRVQAPVKVSFGRLFFLAVAGYNRQNEGEHIDL CCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEHHHHHHHHHHHCCCCCCCCCEEEE QMPDGKDYNWVFYLQSKWYENTRYIDAAYDGAMNQITENSVVICQREIEKNAPPEKKKKT ECCCCCCCCEEEEEECCCCCCCEEEEHHHHHHHHHHCCCCEEEEEHHHHCCCCCCHHHHH DQKLYGVDSHNEGADQEKFDELKETEKEAAIK HHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA