| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is yicG [C]
Identifier: 146299991
GI number: 146299991
Start: 2690214
End: 2690816
Strand: Direct
Name: yicG [C]
Synonym: Fjoh_2235
Alternate gene names: 146299991
Gene position: 2690214-2690816 (Clockwise)
Preceding gene: 146299990
Following gene: 146299992
Centisome position: 44.12
GC content: 35.16
Gene sequence:
>603_bases ATGTTTCATTTATTAGATATTATTGGTACAATGGCCTTTGCCATGTCTGGTGCTTTAACAGCAATGCATAAAAGACTCGA TCCGTTTGGGGTTTTTATAATTGCTTTTGTTACGGCTGTAGGAGGCGGAACACTCCGCGATGTTTTAATTGGCAGAACTC CGGTAGGCTGGATGATGAACCTTCAATATGTTTATGTGATTATTTTAGGTTTTTTTCTGGCTATTATTTTTAGAAAAAAG TTTGATAAACTCAGAACTTCATTATTTTTGTTTGACACCATTGGGTTGGGAGTTTTTACTTTGATAGGTCTGGAAAGAGG TCTTTTAACAGGACTGCATCCCGTTATATGTATTGCCTTAGGAACCATGACGGCTTGTTTTGGAGGAGTGACACGAGATA TTTTGTGCAATGAGATTCCAACTGTTTTTAGAAGAGAAATTTATGCTACGATATGCATTTTTGGAGGCATTGTATTTTTT GGACTTCGTAAACTAAATTTAGAAGACGATATATTGTATTTAGTAACTTCGATTGTAATAATTTCTATTCGCTTACTGGC AGTAAAATACAAATGGTATCTGCGTGCTTTTGAACATAAATAG
Upstream 100 bases:
>100_bases ACGTTAAAAGATAAATAAATACTTGAAGTAGAATACCACTAAAAAAATAGGAGAAATACTAAAATCTCTGCACCTTTGCA TCTTTGTAACTTAAGAAAAA
Downstream 100 bases:
>100_bases AATTTAATTAGATATATTAGCCACAGATTAAACGGATTAAATAGTTTTTTTAAATCATTGTAACCGTAAAATCTGCGACA GAAAAATGAAAAACCTTACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MFHLLDIIGTMAFAMSGALTAMHKRLDPFGVFIIAFVTAVGGGTLRDVLIGRTPVGWMMNLQYVYVIILGFFLAIIFRKK FDKLRTSLFLFDTIGLGVFTLIGLERGLLTGLHPVICIALGTMTACFGGVTRDILCNEIPTVFRREIYATICIFGGIVFF GLRKLNLEDDILYLVTSIVIISIRLLAVKYKWYLRAFEHK
Sequences:
>Translated_200_residues MFHLLDIIGTMAFAMSGALTAMHKRLDPFGVFIIAFVTAVGGGTLRDVLIGRTPVGWMMNLQYVYVIILGFFLAIIFRKK FDKLRTSLFLFDTIGLGVFTLIGLERGLLTGLHPVICIALGTMTACFGGVTRDILCNEIPTVFRREIYATICIFGGIVFF GLRKLNLEDDILYLVTSIVIISIRLLAVKYKWYLRAFEHK >Mature_200_residues MFHLLDIIGTMAFAMSGALTAMHKRLDPFGVFIIAFVTAVGGGTLRDVLIGRTPVGWMMNLQYVYVIILGFFLAIIFRKK FDKLRTSLFLFDTIGLGVFTLIGLERGLLTGLHPVICIALGTMTACFGGVTRDILCNEIPTVFRREIYATICIFGGIVFF GLRKLNLEDDILYLVTSIVIISIRLLAVKYKWYLRAFEHK
Specific function: Unknown
COG id: COG2860
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0126 family [H]
Homologues:
Organism=Escherichia coli, GI87082304, Length=176, Percent_Identity=36.9318181818182, Blast_Score=132, Evalue=2e-32, Organism=Escherichia coli, GI1786352, Length=199, Percent_Identity=36.6834170854271, Blast_Score=115, Evalue=2e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005115 [H]
Pfam domain/function: PF03458 UPF0126 [H]
EC number: NA
Molecular weight: Translated: 22454; Mature: 22454
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFHLLDIIGTMAFAMSGALTAMHKRLDPFGVFIIAFVTAVGGGTLRDVLIGRTPVGWMMN CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHH LQYVYVIILGFFLAIIFRKKFDKLRTSLFLFDTIGLGVFTLIGLERGLLTGLHPVICIAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GTMTACFGGVTRDILCNEIPTVFRREIYATICIFGGIVFFGLRKLNLEDDILYLVTSIVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH ISIRLLAVKYKWYLRAFEHK HHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFHLLDIIGTMAFAMSGALTAMHKRLDPFGVFIIAFVTAVGGGTLRDVLIGRTPVGWMMN CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHH LQYVYVIILGFFLAIIFRKKFDKLRTSLFLFDTIGLGVFTLIGLERGLLTGLHPVICIAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GTMTACFGGVTRDILCNEIPTVFRREIYATICIFGGIVFFGLRKLNLEDDILYLVTSIVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH ISIRLLAVKYKWYLRAFEHK HHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]