| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is guaB [H]
Identifier: 146299973
GI number: 146299973
Start: 2670436
End: 2671908
Strand: Direct
Name: guaB [H]
Synonym: Fjoh_2217
Alternate gene names: 146299973
Gene position: 2670436-2671908 (Clockwise)
Preceding gene: 146299972
Following gene: 146299989
Centisome position: 43.8
GC content: 38.49
Gene sequence:
>1473_bases ATGATAGCACACAACTCCAAGATTATCGGCGAAGGTTTAACTTACGACGATGTATTATTAGTACCTAACTACTCGAATGT GCTTCCCCGCGAAGTGAGTATCAAATCAAAATTCTCAAGAAACATAACATTAAACGTTCCAATTGTATCTGCTGCTATGG ATACAGTGACCGAAAGTGCAATGGCAATTGCTATGGCACAAGAAGGCGGAATTGGAGTTTTACATAAAAACATGACGATC GAGCAGCAAGCTGCGAAAGTTAGAAAAGTGAAGCGTGCTGAGGCAGGAATGATTATCGATCCGGTAACATTACCAACAAA TTCAACTATTGCAGATGCTAAAAACGCTATGAAAGAATTCGGAATTGGCGGTATTCCAATTGTTGACGAAAACAAAATCC TTAAAGGAATTGTTACCAATCGTGACTTACGTTTCGAAAAAAATGGAGCAAGACCAATCGCTGAAGTAATGACAAGCTCA AACTTAGTTACTGTTGCCGAAGGAACTTCATTAGAACAGGCTGAAGTAGTTTTACAAGGTCATAAAATCGAAAAATTACC AGTTGTAAATGCTCAAAACGAATTAGTTGGTTTAATTACGTTTAGAGATATTACAAAACTGACTCAAAAACCAATCGCTA ACAAAGATTCATTTGGTCGTTTAAGAGTTGCCGCTGCTATTGGCGTTACAGGAGATGCAGTTCAAAGAGCTGAAGCTTTA GTTGCTGCCGGAGTAGATGCTATCATTATTGATACAGCTCACGGACATACTGAAGGTGTAGTTAATGTATTAAAAGAAGT AAAATCAAAATTCCCTCAAATAGATGTAATTGTTGGAAACATTGCAACTCCGGAAGCTGCTAAATATTTAGTAGAAAGCG GTGCTGATGGTGTAAAAGTTGGAATTGGACCTGGTTCAATCTGTACTACACGTATTGTTGCTGGTGTTGGTTTTCCTCAA TTTTCAGCGGTTTTAGAAGTTGCTGCAGCAATTAAAGGAACTGGAGTTCCGGTTATTGCAGATGGTGGGATTCGTTATAC AGGAGATATTCCTAAAGCAATTGCTGCTGGTGCTGACTGTGTAATGTTAGGTTCATTATTAGCAGGAACAAAAGAATCTC CTGGAGAAACTATTATTTTTGAAGGAAGAAAATTCAAATCATACCGTGGAATGGGATCTGTTGAGGCAATGCAGACAGGT TCTAAAGACCGTTATTTTCAAGATGTTGAAGACGATGTTAAAAAATTAGTTCCGGAAGGAATCGTTGGACGTGTTCCTTA CAAAGGAGAATTAAACGAAAGCATGCTTCAGTTTATTGGAGGTCTTCGTGCAGGTATGGGGTACTGTGGTTCAAAAGATA TTCCTACTTTACAGGAAACAGGACGTTTTGTTAGAATCACGTCAAGCGGAATCACTGAAAGTCACCCGCATAACGTAACT ATTACAAAAGAAGCTCCAAATTATTCTAGATAA
Upstream 100 bases:
>100_bases CATAAGTATTTTCCTGTAAAGTTAAATTTATGAATAAGTTAGTATTCAAGTTAGCAATTTATTCACTATATTTGCACGCA ATTCAACTAGAAATTGCACC
Downstream 100 bases:
>100_bases TTTTTAGTTTTTCAAATATCAAAAAAGGCATAAGATTTAGTTTCTTATGCCTTTTTTGTTTTAATTGATAATTGAAATTC CATTATTCAATTCATCAATA
Product: inosine-5'-monophosphate dehydrogenase
Products: NA
Alternate protein names: IMP dehydrogenase; IMPD; IMPDH; Superoxide-inducible protein 12; SOI12 [H]
Number of amino acids: Translated: 490; Mature: 490
Protein sequence:
>490_residues MIAHNSKIIGEGLTYDDVLLVPNYSNVLPREVSIKSKFSRNITLNVPIVSAAMDTVTESAMAIAMAQEGGIGVLHKNMTI EQQAAKVRKVKRAEAGMIIDPVTLPTNSTIADAKNAMKEFGIGGIPIVDENKILKGIVTNRDLRFEKNGARPIAEVMTSS NLVTVAEGTSLEQAEVVLQGHKIEKLPVVNAQNELVGLITFRDITKLTQKPIANKDSFGRLRVAAAIGVTGDAVQRAEAL VAAGVDAIIIDTAHGHTEGVVNVLKEVKSKFPQIDVIVGNIATPEAAKYLVESGADGVKVGIGPGSICTTRIVAGVGFPQ FSAVLEVAAAIKGTGVPVIADGGIRYTGDIPKAIAAGADCVMLGSLLAGTKESPGETIIFEGRKFKSYRGMGSVEAMQTG SKDRYFQDVEDDVKKLVPEGIVGRVPYKGELNESMLQFIGGLRAGMGYCGSKDIPTLQETGRFVRITSSGITESHPHNVT ITKEAPNYSR
Sequences:
>Translated_490_residues MIAHNSKIIGEGLTYDDVLLVPNYSNVLPREVSIKSKFSRNITLNVPIVSAAMDTVTESAMAIAMAQEGGIGVLHKNMTI EQQAAKVRKVKRAEAGMIIDPVTLPTNSTIADAKNAMKEFGIGGIPIVDENKILKGIVTNRDLRFEKNGARPIAEVMTSS NLVTVAEGTSLEQAEVVLQGHKIEKLPVVNAQNELVGLITFRDITKLTQKPIANKDSFGRLRVAAAIGVTGDAVQRAEAL VAAGVDAIIIDTAHGHTEGVVNVLKEVKSKFPQIDVIVGNIATPEAAKYLVESGADGVKVGIGPGSICTTRIVAGVGFPQ FSAVLEVAAAIKGTGVPVIADGGIRYTGDIPKAIAAGADCVMLGSLLAGTKESPGETIIFEGRKFKSYRGMGSVEAMQTG SKDRYFQDVEDDVKKLVPEGIVGRVPYKGELNESMLQFIGGLRAGMGYCGSKDIPTLQETGRFVRITSSGITESHPHNVT ITKEAPNYSR >Mature_490_residues MIAHNSKIIGEGLTYDDVLLVPNYSNVLPREVSIKSKFSRNITLNVPIVSAAMDTVTESAMAIAMAQEGGIGVLHKNMTI EQQAAKVRKVKRAEAGMIIDPVTLPTNSTIADAKNAMKEFGIGGIPIVDENKILKGIVTNRDLRFEKNGARPIAEVMTSS NLVTVAEGTSLEQAEVVLQGHKIEKLPVVNAQNELVGLITFRDITKLTQKPIANKDSFGRLRVAAAIGVTGDAVQRAEAL VAAGVDAIIIDTAHGHTEGVVNVLKEVKSKFPQIDVIVGNIATPEAAKYLVESGADGVKVGIGPGSICTTRIVAGVGFPQ FSAVLEVAAAIKGTGVPVIADGGIRYTGDIPKAIAAGADCVMLGSLLAGTKESPGETIIFEGRKFKSYRGMGSVEAMQTG SKDRYFQDVEDDVKKLVPEGIVGRVPYKGELNESMLQFIGGLRAGMGYCGSKDIPTLQETGRFVRITSSGITESHPHNVT ITKEAPNYSR
Specific function: GMP biosynthesis from IMP; first step. [C]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Homo sapiens, GI217035146, Length=456, Percent_Identity=42.3245614035088, Blast_Score=340, Evalue=1e-93, Organism=Homo sapiens, GI34328930, Length=456, Percent_Identity=42.3245614035088, Blast_Score=340, Evalue=2e-93, Organism=Homo sapiens, GI66933016, Length=483, Percent_Identity=40.7867494824017, Blast_Score=340, Evalue=2e-93, Organism=Homo sapiens, GI34328928, Length=456, Percent_Identity=42.3245614035088, Blast_Score=340, Evalue=2e-93, Organism=Homo sapiens, GI156616279, Length=456, Percent_Identity=42.3245614035088, Blast_Score=339, Evalue=3e-93, Organism=Homo sapiens, GI217035152, Length=450, Percent_Identity=42, Blast_Score=330, Evalue=2e-90, Organism=Homo sapiens, GI217035148, Length=456, Percent_Identity=41.2280701754386, Blast_Score=325, Evalue=4e-89, Organism=Homo sapiens, GI217035150, Length=456, Percent_Identity=39.0350877192982, Blast_Score=301, Evalue=1e-81, Organism=Homo sapiens, GI50541954, Length=341, Percent_Identity=33.7243401759531, Blast_Score=174, Evalue=2e-43, Organism=Homo sapiens, GI50541952, Length=341, Percent_Identity=33.7243401759531, Blast_Score=174, Evalue=2e-43, Organism=Homo sapiens, GI50541948, Length=341, Percent_Identity=33.7243401759531, Blast_Score=174, Evalue=2e-43, Organism=Homo sapiens, GI50541956, Length=341, Percent_Identity=33.7243401759531, Blast_Score=174, Evalue=2e-43, Organism=Homo sapiens, GI156104880, Length=225, Percent_Identity=40.8888888888889, Blast_Score=168, Evalue=9e-42, Organism=Escherichia coli, GI1788855, Length=483, Percent_Identity=52.5879917184265, Blast_Score=471, Evalue=1e-134, Organism=Escherichia coli, GI1786293, Length=222, Percent_Identity=38.2882882882883, Blast_Score=154, Evalue=1e-38, Organism=Caenorhabditis elegans, GI71994385, Length=484, Percent_Identity=36.5702479338843, Blast_Score=300, Evalue=1e-81, Organism=Caenorhabditis elegans, GI71994389, Length=431, Percent_Identity=38.5150812064965, Blast_Score=288, Evalue=4e-78, Organism=Caenorhabditis elegans, GI17560440, Length=259, Percent_Identity=37.8378378378378, Blast_Score=172, Evalue=3e-43, Organism=Saccharomyces cerevisiae, GI6322012, Length=490, Percent_Identity=39.7959183673469, Blast_Score=328, Evalue=1e-90, Organism=Saccharomyces cerevisiae, GI6323464, Length=483, Percent_Identity=40.3726708074534, Blast_Score=323, Evalue=4e-89, Organism=Saccharomyces cerevisiae, GI6323585, Length=483, Percent_Identity=39.1304347826087, Blast_Score=323, Evalue=5e-89, Organism=Saccharomyces cerevisiae, GI6319352, Length=345, Percent_Identity=39.1304347826087, Blast_Score=246, Evalue=6e-66, Organism=Saccharomyces cerevisiae, GI6319353, Length=116, Percent_Identity=41.3793103448276, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI24641071, Length=490, Percent_Identity=41.6326530612245, Blast_Score=343, Evalue=1e-94, Organism=Drosophila melanogaster, GI24641073, Length=490, Percent_Identity=41.6326530612245, Blast_Score=343, Evalue=1e-94, Organism=Drosophila melanogaster, GI28571163, Length=447, Percent_Identity=41.6107382550336, Blast_Score=303, Evalue=2e-82,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR005990 - InterPro: IPR018529 - InterPro: IPR015875 - InterPro: IPR001093 [H]
Pfam domain/function: PF00571 CBS; PF00478 IMPDH [H]
EC number: =1.1.1.205 [H]
Molecular weight: Translated: 51903; Mature: 51903
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: PS00487 IMP_DH_GMP_RED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAHNSKIIGEGLTYDDVLLVPNYSNVLPREVSIKSKFSRNITLNVPIVSAAMDTVTESA CCCCCCEEEECCCCCCCEEEECCCCCCCCCCEEHHHHCCCCEEEECCHHHHHHHHHHHHH MAIAMAQEGGIGVLHKNMTIEQQAAKVRKVKRAEAGMIIDPVTLPTNSTIADAKNAMKEF HEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHCCCEEEECEECCCCCCHHHHHHHHHHC GIGGIPIVDENKILKGIVTNRDLRFEKNGARPIAEVMTSSNLVTVAEGTSLEQAEVVLQG CCCCCEEECCCHHHHHHHCCCCEEEECCCCCHHHHHHCCCCEEEEECCCCCHHHHHHHCC HKIEKLPVVNAQNELVGLITFRDITKLTQKPIANKDSFGRLRVAAAIGVTGDAVQRAEAL CCEEECCEECCCCCEEEEEEHHHHHHHHHCCCCCCCCCCEEEEEEEECCCHHHHHHHHHH VAAGVDAIIIDTAHGHTEGVVNVLKEVKSKFPQIDVIVGNIATPEAAKYLVESGADGVKV HHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHCCCCCEEE GIGPGSICTTRIVAGVGFPQFSAVLEVAAAIKGTGVPVIADGGIRYTGDIPKAIAAGADC ECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEECCCEEECCCCCHHHHCCCCH VMLGSLLAGTKESPGETIIFEGRKFKSYRGMGSVEAMQTGSKDRYFQDVEDDVKKLVPEG HHHHHHHHCCCCCCCCEEEECCCEEHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCC IVGRVPYKGELNESMLQFIGGLRAGMGYCGSKDIPTLQETGRFVRITSSGITESHPHNVT CEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCEEEEECCCCCCCCCCCEE ITKEAPNYSR EEECCCCCCC >Mature Secondary Structure MIAHNSKIIGEGLTYDDVLLVPNYSNVLPREVSIKSKFSRNITLNVPIVSAAMDTVTESA CCCCCCEEEECCCCCCCEEEECCCCCCCCCCEEHHHHCCCCEEEECCHHHHHHHHHHHHH MAIAMAQEGGIGVLHKNMTIEQQAAKVRKVKRAEAGMIIDPVTLPTNSTIADAKNAMKEF HEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHCCCEEEECEECCCCCCHHHHHHHHHHC GIGGIPIVDENKILKGIVTNRDLRFEKNGARPIAEVMTSSNLVTVAEGTSLEQAEVVLQG CCCCCEEECCCHHHHHHHCCCCEEEECCCCCHHHHHHCCCCEEEEECCCCCHHHHHHHCC HKIEKLPVVNAQNELVGLITFRDITKLTQKPIANKDSFGRLRVAAAIGVTGDAVQRAEAL CCEEECCEECCCCCEEEEEEHHHHHHHHHCCCCCCCCCCEEEEEEEECCCHHHHHHHHHH VAAGVDAIIIDTAHGHTEGVVNVLKEVKSKFPQIDVIVGNIATPEAAKYLVESGADGVKV HHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHCCCCCEEE GIGPGSICTTRIVAGVGFPQFSAVLEVAAAIKGTGVPVIADGGIRYTGDIPKAIAAGADC ECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEECCCEEECCCCCHHHHCCCCH VMLGSLLAGTKESPGETIIFEGRKFKSYRGMGSVEAMQTGSKDRYFQDVEDDVKKLVPEG HHHHHHHHCCCCCCCCEEEECCCEEHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCC IVGRVPYKGELNESMLQFIGGLRAGMGYCGSKDIPTLQETGRFVRITSSGITESHPHNVT CEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCEEEEECCCCCCCCCCCEE ITKEAPNYSR EEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1979163; 7584024; 9384377; 9298659 [H]