| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146299862
Identifier: 146299862
GI number: 146299862
Start: 2540496
End: 2541863
Strand: Direct
Name: 146299862
Synonym: Fjoh_2104
Alternate gene names: NA
Gene position: 2540496-2541863 (Clockwise)
Preceding gene: 146299861
Following gene: 146299880
Centisome position: 41.67
GC content: 33.33
Gene sequence:
>1368_bases ATGCTAGAAAATATAATAGAAGAATATACGATCCTTTCGGATAAATTTTCAAAATTCAGATACAATGATCAATTTCCTTC AAGGATTGATACTAATGATGAATCAGTTCCTGAAGTTTTCAAAAATTATGAGTATCCTGTTACATCATGGCCCATACTCA TTAATAAAGAAATGACTGAACAGCTAAATGAGCTTTCTCATAGACTGCCAAAACTGCTGAATAAAATTCCGTCTCTATAT TTTAATAATGACATAAAAAAAATTGCTGAATTTTATTTTGATGGGAATGAAATACTTGCCGAATTTGGAATGATGTGCCA TGAAAAAAACATTGAAGTTGGGTGCAGATTAGATTTGACTTACACAGAGGATGGCTTTAAAGTTTTAGAAGCCAACATGG GATCTTCATTAGGAGGATGGCAGATACATAGTTTGGAATCTGTCATTAGAAGAAATCATCCTGAGTTGTCAGATGAAGAT AAATCAGACAATTACAAGACAAGAAATACTCTTAAAATTTACATGGAATATCTTATTGAACAGATCAGAAAACAAGTAGG AAGAGACAAAAAGAAGCTCAATTTGTTTATTGATATGAGAGATATTGAAACTGTAGACCGAGAGAAAAACTTATCTTTTT TTGACAATTTCTACAGACAGGAATTAAAGAATCAAGGATTAGAAGGTCAGGCATATTCGGCTAATATAAATTCGTTAGAA CTTATCGATGGGGACTTATATTTTGAAGATACGGTTATTCATGGAGTTATAATTTTAGCATTAGATGTAGAAATTACTCC TGCAATTTTCAGGGCATTCATAATGGATAAAATATATTTTCCAGACCATGTAGGTTTAAGGATGCTTGGCGATAAAAGAA ATTTGGCCATATTGAGAGAATTAGCTCAGTCTGGAAAATTCTCAGCAAGAGACAATGAATTAATGCTTAGCCATATTCCC TGGACTTCGCCAGTTGAAAACAAGACTACTATTTTTAAAGGTGTAGAATATAATCTTTCACAATTACTCAAAAAAAATAA AAGCAGATTCGTGATAAAAGCCGCAAGAGGATATCAGGGAAAAGATGTTTTTATTGGCAAATTTACCAATACGGATGAAT GGGAAGAAGTGTTAGAAAAAGCTTTGGAAAATGGTGCTTTTATAGCTCAGGAGTTTAGTGATTCTGTTGACTTTGCAGCT CCCAATAGGCACAATGAATGGACTCCGCATAAACTTATCTGGGGAGCATTTGGATTTGGAGATTTTTATGGAGGCGTCTG GGTGAGAATGTCAGAAGTAAAAACAGATGTTGGTGTTATTAATTCAGCTACAGGTGCAGTAGAAGCAATTGTATTTGAGA TTCTTTAA
Upstream 100 bases:
>100_bases CTGCTTGCCACTTATTTATTTTATTGGGGAATCATCTAAAAAACAACCAGTAGAATCTTCAACATAATTCGATAAAAAAA TAACAATAAAAGAACTTATT
Downstream 100 bases:
>100_bases TTTTTTAACTAGTCCTGAAAGTTTTGCCCATTTCAGGACTAGTTAAATATGACATAGTTAATACTATGATCTCAATGTCA TTTTCGATTTTTATTTTAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 455; Mature: 455
Protein sequence:
>455_residues MLENIIEEYTILSDKFSKFRYNDQFPSRIDTNDESVPEVFKNYEYPVTSWPILINKEMTEQLNELSHRLPKLLNKIPSLY FNNDIKKIAEFYFDGNEILAEFGMMCHEKNIEVGCRLDLTYTEDGFKVLEANMGSSLGGWQIHSLESVIRRNHPELSDED KSDNYKTRNTLKIYMEYLIEQIRKQVGRDKKKLNLFIDMRDIETVDREKNLSFFDNFYRQELKNQGLEGQAYSANINSLE LIDGDLYFEDTVIHGVIILALDVEITPAIFRAFIMDKIYFPDHVGLRMLGDKRNLAILRELAQSGKFSARDNELMLSHIP WTSPVENKTTIFKGVEYNLSQLLKKNKSRFVIKAARGYQGKDVFIGKFTNTDEWEEVLEKALENGAFIAQEFSDSVDFAA PNRHNEWTPHKLIWGAFGFGDFYGGVWVRMSEVKTDVGVINSATGAVEAIVFEIL
Sequences:
>Translated_455_residues MLENIIEEYTILSDKFSKFRYNDQFPSRIDTNDESVPEVFKNYEYPVTSWPILINKEMTEQLNELSHRLPKLLNKIPSLY FNNDIKKIAEFYFDGNEILAEFGMMCHEKNIEVGCRLDLTYTEDGFKVLEANMGSSLGGWQIHSLESVIRRNHPELSDED KSDNYKTRNTLKIYMEYLIEQIRKQVGRDKKKLNLFIDMRDIETVDREKNLSFFDNFYRQELKNQGLEGQAYSANINSLE LIDGDLYFEDTVIHGVIILALDVEITPAIFRAFIMDKIYFPDHVGLRMLGDKRNLAILRELAQSGKFSARDNELMLSHIP WTSPVENKTTIFKGVEYNLSQLLKKNKSRFVIKAARGYQGKDVFIGKFTNTDEWEEVLEKALENGAFIAQEFSDSVDFAA PNRHNEWTPHKLIWGAFGFGDFYGGVWVRMSEVKTDVGVINSATGAVEAIVFEIL >Mature_455_residues MLENIIEEYTILSDKFSKFRYNDQFPSRIDTNDESVPEVFKNYEYPVTSWPILINKEMTEQLNELSHRLPKLLNKIPSLY FNNDIKKIAEFYFDGNEILAEFGMMCHEKNIEVGCRLDLTYTEDGFKVLEANMGSSLGGWQIHSLESVIRRNHPELSDED KSDNYKTRNTLKIYMEYLIEQIRKQVGRDKKKLNLFIDMRDIETVDREKNLSFFDNFYRQELKNQGLEGQAYSANINSLE LIDGDLYFEDTVIHGVIILALDVEITPAIFRAFIMDKIYFPDHVGLRMLGDKRNLAILRELAQSGKFSARDNELMLSHIP WTSPVENKTTIFKGVEYNLSQLLKKNKSRFVIKAARGYQGKDVFIGKFTNTDEWEEVLEKALENGAFIAQEFSDSVDFAA PNRHNEWTPHKLIWGAFGFGDFYGGVWVRMSEVKTDVGVINSATGAVEAIVFEIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52677; Mature: 52677
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLENIIEEYTILSDKFSKFRYNDQFPSRIDTNDESVPEVFKNYEYPVTSWPILINKEMTE CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCEEECHHHHH QLNELSHRLPKLLNKIPSLYFNNDIKKIAEFYFDGNEILAEFGMMCHEKNIEVGCRLDLT HHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEEEE YTEDGFKVLEANMGSSLGGWQIHSLESVIRRNHPELSDEDKSDNYKTRNTLKIYMEYLIE ECCCCCEEEECCCCCCCCCEEHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH QIRKQVGRDKKKLNLFIDMRDIETVDREKNLSFFDNFYRQELKNQGLEGQAYSANINSLE HHHHHHCCCCEEEEEEEEEHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCEEE LIDGDLYFEDTVIHGVIILALDVEITPAIFRAFIMDKIYFPDHVGLRMLGDKRNLAILRE EECCCEEEHHHHHHEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHH LAQSGKFSARDNELMLSHIPWTSPVENKTTIFKGVEYNLSQLLKKNKSRFVIKAARGYQG HHHCCCCCCCCCCEEEEECCCCCCCCCCCEEEECCCHHHHHHHHCCCCEEEEEECCCCCC KDVFIGKFTNTDEWEEVLEKALENGAFIAQEFSDSVDFAAPNRHNEWTPHKLIWGAFGFG CEEEEEECCCCHHHHHHHHHHHHCCCEEEHHHCCCCCCCCCCCCCCCCCCCEEEECCCHH DFYGGVWVRMSEVKTDVGVINSATGAVEAIVFEIL HHHCCCEEEHHHHHHHHHHHCCCHHHHHHHHHHCC >Mature Secondary Structure MLENIIEEYTILSDKFSKFRYNDQFPSRIDTNDESVPEVFKNYEYPVTSWPILINKEMTE CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCEEECHHHHH QLNELSHRLPKLLNKIPSLYFNNDIKKIAEFYFDGNEILAEFGMMCHEKNIEVGCRLDLT HHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEEEE YTEDGFKVLEANMGSSLGGWQIHSLESVIRRNHPELSDEDKSDNYKTRNTLKIYMEYLIE ECCCCCEEEECCCCCCCCCEEHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH QIRKQVGRDKKKLNLFIDMRDIETVDREKNLSFFDNFYRQELKNQGLEGQAYSANINSLE HHHHHHCCCCEEEEEEEEEHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCEEE LIDGDLYFEDTVIHGVIILALDVEITPAIFRAFIMDKIYFPDHVGLRMLGDKRNLAILRE EECCCEEEHHHHHHEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHH LAQSGKFSARDNELMLSHIPWTSPVENKTTIFKGVEYNLSQLLKKNKSRFVIKAARGYQG HHHCCCCCCCCCCEEEEECCCCCCCCCCCEEEECCCHHHHHHHHCCCCEEEEEECCCCCC KDVFIGKFTNTDEWEEVLEKALENGAFIAQEFSDSVDFAAPNRHNEWTPHKLIWGAFGFG CEEEEEECCCCHHHHHHHHHHHHCCCEEEHHHCCCCCCCCCCCCCCCCCCCEEEECCCHH DFYGGVWVRMSEVKTDVGVINSATGAVEAIVFEIL HHHCCCEEEHHHHHHHHHHHCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA