| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146299791
Identifier: 146299791
GI number: 146299791
Start: 2385537
End: 2387780
Strand: Direct
Name: 146299791
Synonym: Fjoh_2032
Alternate gene names: NA
Gene position: 2385537-2387780 (Clockwise)
Preceding gene: 146299788
Following gene: 146299792
Centisome position: 39.13
GC content: 35.83
Gene sequence:
>2244_bases ATGAAGAAAATTTTCGTGCCTGCTTTATTTGTAATTCTGGTTACAAGTTGTAAAATAAAGTCATACAAAAATAATAATCA AGAAAATATTTTTGTAAGCCATGTTGATCCTTTTATTGGGACAGGTGGACACGGCCATACGTATCCTGGAGCGACAGTTC CTTTTGGAATGTTACAAGTAAGTCCTGATAACGGAATATCAAGCTGGGATTGGTGTTCAGGCTATCATTACTCAGATTCT ATTGTTTCTGGTTTCAGTCATTTGCACTTAAGCGGAACCGGAATTGGCGATTTGGCAGACATTTTATTTATGCCGACAAA CAAAAAAGTCGATTTAACAGCTAAAACAACATCACGCGATCAATTACCATATAAATCATTATACAGTCATGCTAACGAAA AAGCAGCACCAGGTTCTTACCAGGTTTTTCTTGAGGATCCTAAGATCAATGTAGAATTAACTTCTTCACAAAGAACAGCT TATCACAAATATACATTTGCTAAAAATGACAAACAATCTGTTGTAGTCGATTTAGGATTTGCTATTAATTGGGATAAAGC TTTAAAGACAGAAATTAAAATTGAAGACGAATATACTATAAGTGGTTATCGTTATAGTATGGGCTGGGCAAAAAATCAGA AAGTATTTTTTGTGGCTAAGTTTTCTAAACCTATTTCTGAGTCAGTTTTAATTGCTGATAAACAAATTGTTAATGGTGAA AAAGCTGACGGAGAAAATACTTCGGCACAATTATTTTTTGATCCGAAAAACTCCGATCAGCTTTTTGTAAAAGTGGCACT TTCATCTGTAAGTACGGCGAATGCAAAAGAAAATTTAGACGGAGAAAAAGCCAATTTCGACAATACAAAATCAGAAGCTT CTTCTGTTTGGAATAAAGCATTAAGTAAAATTAAAGTTGAAACACCAGTAGATTCGTTAAAAACGATTTTCTATACTGCG ATGTATCACGCACAAGTTGCCCCTGTAACCTATAGTGATAAAAACGGTCAATTTAGGAGAGAGGATGATCAAATTGTTAC AGCAAAAGATTATACCGCTTATTCGACCTTATCACTATGGGATACTTTTAGAGCCGAAAATCCATTATTGACTCTGCTGG CGCCAGATAAAGCTTCAGATATTGTAAACTCAATGTTAGCGTATTACGATACCAAAAAAATATTACCGGTTTGGACACTA TACGCCAATGAAACGAATACAATGACAGGTTACCATTCCATTCCGGTAATTGTTGATGCCTATTTAAAAGGAATAAAAGG TTTTGATGCCGAAAAAGCTTTCGAAGCTATGAAAACTACGATGATGCAGGACGAACGTGGTTTAAATTTCTACAAAAAAT ACGGTTATATACCTTATAATTTATTAGACGAATCAGTTACAATTACTCTGGAATATGCTTATGACGATTGGTGCGTGGCC CAAATGGCAAAAGCTTTAGGAAAAAATGCCGATTACGAATTTTTCTTAAAACGTTCTCAGGCATACCAATATTTATTTGA TCCGAAAACAGGATTCATGAGAGGAAAATCTGAAGACGGGAAATCATGGAATGAGCCTTTCGATCCAAAACATTCGAATC ACAGAGAACATACAGATTATACCGAAGGAAATGCATGGCAGCACAGCTGGTTTGTACCTCATAATGTAGAAGATTTTATT AAACTTCACGGAAGCACTGAAGTATTTACGAAACGCTTAGAGCAGTTATTTACAGAGAGTTCAGAAATTACGGGAAACAA TGTTTCGGCAGATATTTCAGGATTAATTGGGCAGTATGCACACGGAAACGAGCCAAGCCACCATATTGCGTATATGTTCA ATCATGCAGGCCAGCCTTGGAGAACACAATATTGGGTTCGTCATATTTTTGATACGCAATATAATACAACACCAAACGGA TTAAGCGGTAATGAAGACTGCGGACAAATGTCTGCATGGTATGTTTTTAGTTCAATGGGATTATATCCTATGAATCCGGC TTCTGGCGAATACGAAATTGGAAGTCCGATTTTTGAAAAAGCAACTATCAATCTTGAAAAAGGGAAAACGTTTGTAATTG AAGCTGAGAATGTTTCAGACAAAAACTTTTATATCCAGTCGGCGACTTTAAACGGAGTCGAATTCAATCAAACAGCAATT ACACATCAACAGATTTTAAAAGGCGGGGTTTTACATTTTGTAATGGGATCGCAGCCAAATAAAAGCTGGGGAACAAAAAA ATAA
Upstream 100 bases:
>100_bases TTTTTTTGATGTTTATCTAAGTTTATATGTTGTCCGTCTAAATAAGTTTTAATAAAAAGTCAGTTTATATAAATTTAAAG TTAAATTAAGGTTGTTTTAT
Downstream 100 bases:
>100_bases ACAAAACAAAAAACAAAACTAACCTACTAACAAAAAAAATTAAATGGATATTATTGACGTATCGATAATCGTAGCTTACA TTCTGCTCTCGGTGAGTATC
Product: putative alpha-1,2-mannosidase
Products: NA
Alternate protein names: Alpha-1 2-Mannosidase Family Protein; Glycoside Hydrolase Family; Glycosyl Hydrolase Family; Secreted Protein; Sugar Hydrolase; Glycoside Hydrolase Family Protein; Outer Membrane Protein; Immunoreactive; Exported Alpha-1 2-Mannosidase; Antigen; Alpha-1 2-Mannosidase Protein; Lipoprotein
Number of amino acids: Translated: 747; Mature: 747
Protein sequence:
>747_residues MKKIFVPALFVILVTSCKIKSYKNNNQENIFVSHVDPFIGTGGHGHTYPGATVPFGMLQVSPDNGISSWDWCSGYHYSDS IVSGFSHLHLSGTGIGDLADILFMPTNKKVDLTAKTTSRDQLPYKSLYSHANEKAAPGSYQVFLEDPKINVELTSSQRTA YHKYTFAKNDKQSVVVDLGFAINWDKALKTEIKIEDEYTISGYRYSMGWAKNQKVFFVAKFSKPISESVLIADKQIVNGE KADGENTSAQLFFDPKNSDQLFVKVALSSVSTANAKENLDGEKANFDNTKSEASSVWNKALSKIKVETPVDSLKTIFYTA MYHAQVAPVTYSDKNGQFRREDDQIVTAKDYTAYSTLSLWDTFRAENPLLTLLAPDKASDIVNSMLAYYDTKKILPVWTL YANETNTMTGYHSIPVIVDAYLKGIKGFDAEKAFEAMKTTMMQDERGLNFYKKYGYIPYNLLDESVTITLEYAYDDWCVA QMAKALGKNADYEFFLKRSQAYQYLFDPKTGFMRGKSEDGKSWNEPFDPKHSNHREHTDYTEGNAWQHSWFVPHNVEDFI KLHGSTEVFTKRLEQLFTESSEITGNNVSADISGLIGQYAHGNEPSHHIAYMFNHAGQPWRTQYWVRHIFDTQYNTTPNG LSGNEDCGQMSAWYVFSSMGLYPMNPASGEYEIGSPIFEKATINLEKGKTFVIEAENVSDKNFYIQSATLNGVEFNQTAI THQQILKGGVLHFVMGSQPNKSWGTKK
Sequences:
>Translated_747_residues MKKIFVPALFVILVTSCKIKSYKNNNQENIFVSHVDPFIGTGGHGHTYPGATVPFGMLQVSPDNGISSWDWCSGYHYSDS IVSGFSHLHLSGTGIGDLADILFMPTNKKVDLTAKTTSRDQLPYKSLYSHANEKAAPGSYQVFLEDPKINVELTSSQRTA YHKYTFAKNDKQSVVVDLGFAINWDKALKTEIKIEDEYTISGYRYSMGWAKNQKVFFVAKFSKPISESVLIADKQIVNGE KADGENTSAQLFFDPKNSDQLFVKVALSSVSTANAKENLDGEKANFDNTKSEASSVWNKALSKIKVETPVDSLKTIFYTA MYHAQVAPVTYSDKNGQFRREDDQIVTAKDYTAYSTLSLWDTFRAENPLLTLLAPDKASDIVNSMLAYYDTKKILPVWTL YANETNTMTGYHSIPVIVDAYLKGIKGFDAEKAFEAMKTTMMQDERGLNFYKKYGYIPYNLLDESVTITLEYAYDDWCVA QMAKALGKNADYEFFLKRSQAYQYLFDPKTGFMRGKSEDGKSWNEPFDPKHSNHREHTDYTEGNAWQHSWFVPHNVEDFI KLHGSTEVFTKRLEQLFTESSEITGNNVSADISGLIGQYAHGNEPSHHIAYMFNHAGQPWRTQYWVRHIFDTQYNTTPNG LSGNEDCGQMSAWYVFSSMGLYPMNPASGEYEIGSPIFEKATINLEKGKTFVIEAENVSDKNFYIQSATLNGVEFNQTAI THQQILKGGVLHFVMGSQPNKSWGTKK >Mature_747_residues MKKIFVPALFVILVTSCKIKSYKNNNQENIFVSHVDPFIGTGGHGHTYPGATVPFGMLQVSPDNGISSWDWCSGYHYSDS IVSGFSHLHLSGTGIGDLADILFMPTNKKVDLTAKTTSRDQLPYKSLYSHANEKAAPGSYQVFLEDPKINVELTSSQRTA YHKYTFAKNDKQSVVVDLGFAINWDKALKTEIKIEDEYTISGYRYSMGWAKNQKVFFVAKFSKPISESVLIADKQIVNGE KADGENTSAQLFFDPKNSDQLFVKVALSSVSTANAKENLDGEKANFDNTKSEASSVWNKALSKIKVETPVDSLKTIFYTA MYHAQVAPVTYSDKNGQFRREDDQIVTAKDYTAYSTLSLWDTFRAENPLLTLLAPDKASDIVNSMLAYYDTKKILPVWTL YANETNTMTGYHSIPVIVDAYLKGIKGFDAEKAFEAMKTTMMQDERGLNFYKKYGYIPYNLLDESVTITLEYAYDDWCVA QMAKALGKNADYEFFLKRSQAYQYLFDPKTGFMRGKSEDGKSWNEPFDPKHSNHREHTDYTEGNAWQHSWFVPHNVEDFI KLHGSTEVFTKRLEQLFTESSEITGNNVSADISGLIGQYAHGNEPSHHIAYMFNHAGQPWRTQYWVRHIFDTQYNTTPNG LSGNEDCGQMSAWYVFSSMGLYPMNPASGEYEIGSPIFEKATINLEKGKTFVIEAENVSDKNFYIQSATLNGVEFNQTAI THQQILKGGVLHFVMGSQPNKSWGTKK
Specific function: Unknown
COG id: COG3537
COG function: function code G; Putative alpha-1,2-mannosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 84250; Mature: 84250
Theoretical pI: Translated: 6.48; Mature: 6.48
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIFVPALFVILVTSCKIKSYKNNNQENIFVSHVDPFIGTGGHGHTYPGATVPFGMLQV CCEEHHHHHHHHHHHHCEEECCCCCCCCEEEEEECCCHHCCCCCCCCCCCCCCCCEEEEE SPDNGISSWDWCSGYHYSDSIVSGFSHLHLSGTGIGDLADILFMPTNKKVDLTAKTTSRD CCCCCCCCCCCCCCCCCCHHHHCCCCEEEEECCCCCHHHHEEECCCCCEEEEEEECCCCC QLPYKSLYSHANEKAAPGSYQVFLEDPKINVELTSSQRTAYHKYTFAKNDKQSVVVDLGF CCCHHHHHHCCCCCCCCCCEEEEEECCEEEEEECCCCCCEEEEEEECCCCCCEEEEEECE AINWDKALKTEIKIEDEYTISGYRYSMGWAKNQKVFFVAKFSKPISESVLIADKQIVNGE EEECCHHCEEEEEECCCEEECCEEEECCCCCCCEEEEEEECCCCCCCCEEEECHHHCCCC KADGENTSAQLFFDPKNSDQLFVKVALSSVSTANAKENLDGEKANFDNTKSEASSVWNKA CCCCCCCCEEEEECCCCCCEEEEEEEEHHCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHH LSKIKVETPVDSLKTIFYTAMYHAQVAPVTYSDKNGQFRREDDQIVTAKDYTAYSTLSLW HHHEEECCCHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCCCEEEECCCCEEEHHHHH DTFRAENPLLTLLAPDKASDIVNSMLAYYDTKKILPVWTLYANETNTMTGYHSIPVIVDA HHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHHHH YLKGIKGFDAEKAFEAMKTTMMQDERGLNFYKKYGYIPYNLLDESVTITLEYAYDDWCVA HHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCHHCCCCEEEEEEEEECCCHHHH QMAKALGKNADYEFFLKRSQAYQYLFDPKTGFMRGKSEDGKSWNEPFDPKHSNHREHTDY HHHHHHCCCCCHHEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TEGNAWQHSWFVPHNVEDFIKLHGSTEVFTKRLEQLFTESSEITGNNVSADISGLIGQYA CCCCCEEEEECCCCCHHHHHEECCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCC HGNEPSHHIAYMFNHAGQPWRTQYWVRHIFDTQYNTTPNGLSGNEDCGQMSAWYVFSSMG CCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC LYPMNPASGEYEIGSPIFEKATINLEKGKTFVIEAENVSDKNFYIQSATLNGVEFNQTAI CEECCCCCCCEECCCCCHHHEEEEEECCCEEEEEECCCCCCEEEEEEEEECCEECCHHHH THQQILKGGVLHFVMGSQPNKSWGTKK HHHHHHCCCEEEEEECCCCCCCCCCCC >Mature Secondary Structure MKKIFVPALFVILVTSCKIKSYKNNNQENIFVSHVDPFIGTGGHGHTYPGATVPFGMLQV CCEEHHHHHHHHHHHHCEEECCCCCCCCEEEEEECCCHHCCCCCCCCCCCCCCCCEEEEE SPDNGISSWDWCSGYHYSDSIVSGFSHLHLSGTGIGDLADILFMPTNKKVDLTAKTTSRD CCCCCCCCCCCCCCCCCCHHHHCCCCEEEEECCCCCHHHHEEECCCCCEEEEEEECCCCC QLPYKSLYSHANEKAAPGSYQVFLEDPKINVELTSSQRTAYHKYTFAKNDKQSVVVDLGF CCCHHHHHHCCCCCCCCCCEEEEEECCEEEEEECCCCCCEEEEEEECCCCCCEEEEEECE AINWDKALKTEIKIEDEYTISGYRYSMGWAKNQKVFFVAKFSKPISESVLIADKQIVNGE EEECCHHCEEEEEECCCEEECCEEEECCCCCCCEEEEEEECCCCCCCCEEEECHHHCCCC KADGENTSAQLFFDPKNSDQLFVKVALSSVSTANAKENLDGEKANFDNTKSEASSVWNKA CCCCCCCCEEEEECCCCCCEEEEEEEEHHCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHH LSKIKVETPVDSLKTIFYTAMYHAQVAPVTYSDKNGQFRREDDQIVTAKDYTAYSTLSLW HHHEEECCCHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCCCEEEECCCCEEEHHHHH DTFRAENPLLTLLAPDKASDIVNSMLAYYDTKKILPVWTLYANETNTMTGYHSIPVIVDA HHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHHHH YLKGIKGFDAEKAFEAMKTTMMQDERGLNFYKKYGYIPYNLLDESVTITLEYAYDDWCVA HHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCHHCCCCEEEEEEEEECCCHHHH QMAKALGKNADYEFFLKRSQAYQYLFDPKTGFMRGKSEDGKSWNEPFDPKHSNHREHTDY HHHHHHCCCCCHHEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TEGNAWQHSWFVPHNVEDFIKLHGSTEVFTKRLEQLFTESSEITGNNVSADISGLIGQYA CCCCCEEEEECCCCCHHHHHEECCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCC HGNEPSHHIAYMFNHAGQPWRTQYWVRHIFDTQYNTTPNGLSGNEDCGQMSAWYVFSSMG CCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC LYPMNPASGEYEIGSPIFEKATINLEKGKTFVIEAENVSDKNFYIQSATLNGVEFNQTAI CEECCCCCCCEECCCCCHHHEEEEEECCCEEEEEECCCCCCEEEEEEEEECCEECCHHHH THQQILKGGVLHFVMGSQPNKSWGTKK HHHHHHCCCEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA