| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146299615
Identifier: 146299615
GI number: 146299615
Start: 2138247
End: 2139788
Strand: Direct
Name: 146299615
Synonym: Fjoh_1855
Alternate gene names: NA
Gene position: 2138247-2139788 (Clockwise)
Preceding gene: 146299614
Following gene: 146299616
Centisome position: 35.07
GC content: 35.54
Gene sequence:
>1542_bases ATGGCAGGAGGAAAATTAACCCCTAGACAGAAGATGATTAACCTGATGTATCTGGTTTTCATCGCAATGTTAGCAATGAA CGTATCAAAAGAAGTTATTTCTGCTTTTGGTTTGATGAATGAAAAATTCGAAGCTGCAAATACATCTTCAGTTACAACAA ATGAAAGTTTGTTGACATCTTTAGATCAAAAAGCTGCTGAAGCAAAAGGAGAATTTGCTAAAGCTGCAGAAACAGCTCAC AAAGTTCAGGCTGCTTCAAAAGAATTCTACGATTACATAGGTACTTTAAAAACTCAGGCTGTAAAAGGTTTTGAAGTTGA TAAAGAAACTGGAAAAATGCCATACGAAGCTATGGATAGAGGTGATAACATCGATGACTGGTTTACAGGAGACGGTTACA CTAAAAAAGGTAATGAAATTATCGCTAAAATCGAGAAATATAAATCAGATATTAAAGCTGCTTTAGGTACAGATAAAAAA TATGCTGGAATTATTTCTGAGGTTGAGAAAAAATTTGATGTTTCTGACGTAAAAAACAAAGAAGGTATTAAAGAAAAATA CTTAGCATACCACTTCAAAGGATTTCCTGCGATCGCTTCAGCTGCAAAACTTTCAGCTTGGCAGAATGACGTTAAGAAAA CTGAAGCTGACGTTTACAACAGTGCATTAGGTAAAGCTGCAGTTGCTGCTGCTTCTTACAGCAACTACCAAGCAATCGTT GTTTTAGACAAAAATGCTTATTTCCAAGGTGAAAAAGTAACTGGTAAGGTAGTTTTAGGGCGTTATGACGAAAATACAAA ACCAACTTCTTTCCAAGGTCCTGGACAAATTGTTAACGGACAAGCAGTAATCTCTTTAACTGCCGGTGGAGTAGGAGAAC AAGATATTAACGGACAATTTACTTTCTTAGAAGATGGTAAAAACATTCCTTTAAAATTCTCTGGAAAATATGTTGTAGTT CCTAGACCAAACTCAGCTACAATTTCTGCTGATAAAATGAATGTAGTTTATAGAGGTGTTGTTAACCCAATCTCTGTATC ATTCGCTGGTGTTGATGCTAACAAAATTGTTGCAAGTGCTCCGGGATTATCTTCTGCAGGAAAACCAGGAAAATATAACA TGAGCCCAGGTCAAGGTACTGAGGCTACAATTTCTGTAACTGGTACATTACCAAACGGAGATAAAGTAACAGATAAGAAA ACATTCAGAATTAAAGGTATTCCTGGTCCAACAGGTACAATTAGAGGTGAAATGGGAGTTGTTAAAGGTCCTAAATCTAA CTTAGAAATTGCTACTATTGGTGCTAAATTACTTGATTTTGATTTTGAAGTTGGTTTAGATGTTGTTGGATTCAACATGA AAATTGCTGGACAGCCTACAGTTGTCGTTACTGGTAATAAAATGAATGCACAATGTAAATCAGTTCTTGCAAGAGCTGGT AAAGGAGACCAAGTTACTATTTCTGAAATTAAAACTAAACTTGTTGGAGCTGGTAGTTATTTATTACCAAGAACTGCTCC GGTAATTTACGAAATACAATAA
Upstream 100 bases:
>100_bases AAACAGCGTTTACGGTGGTATGCTTTCTGCAATGAGTAACAAAGGATAATTAGTTTTTAACTAGATATTACATTTATTAA TAAGAACTAATTAGACAAAA
Downstream 100 bases:
>100_bases TAAAGTAGTTAAAACTACGTTCAATATCTTATAATGATACCACGATGAAAGTAAGAAATTTTTTAATAGCTATTGTTTCT ATCGCTGGAGGTTTTGCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: Gliding Motility Protein GldM; Gliding Motility-Associated Protein Gldm; Gliding Motility-Related Protein; Protein Involved In Gliding Motility Gldm; Gliding Motility-Associated Protein GldM
Number of amino acids: Translated: 513; Mature: 512
Protein sequence:
>513_residues MAGGKLTPRQKMINLMYLVFIAMLAMNVSKEVISAFGLMNEKFEAANTSSVTTNESLLTSLDQKAAEAKGEFAKAAETAH KVQAASKEFYDYIGTLKTQAVKGFEVDKETGKMPYEAMDRGDNIDDWFTGDGYTKKGNEIIAKIEKYKSDIKAALGTDKK YAGIISEVEKKFDVSDVKNKEGIKEKYLAYHFKGFPAIASAAKLSAWQNDVKKTEADVYNSALGKAAVAAASYSNYQAIV VLDKNAYFQGEKVTGKVVLGRYDENTKPTSFQGPGQIVNGQAVISLTAGGVGEQDINGQFTFLEDGKNIPLKFSGKYVVV PRPNSATISADKMNVVYRGVVNPISVSFAGVDANKIVASAPGLSSAGKPGKYNMSPGQGTEATISVTGTLPNGDKVTDKK TFRIKGIPGPTGTIRGEMGVVKGPKSNLEIATIGAKLLDFDFEVGLDVVGFNMKIAGQPTVVVTGNKMNAQCKSVLARAG KGDQVTISEIKTKLVGAGSYLLPRTAPVIYEIQ
Sequences:
>Translated_513_residues MAGGKLTPRQKMINLMYLVFIAMLAMNVSKEVISAFGLMNEKFEAANTSSVTTNESLLTSLDQKAAEAKGEFAKAAETAH KVQAASKEFYDYIGTLKTQAVKGFEVDKETGKMPYEAMDRGDNIDDWFTGDGYTKKGNEIIAKIEKYKSDIKAALGTDKK YAGIISEVEKKFDVSDVKNKEGIKEKYLAYHFKGFPAIASAAKLSAWQNDVKKTEADVYNSALGKAAVAAASYSNYQAIV VLDKNAYFQGEKVTGKVVLGRYDENTKPTSFQGPGQIVNGQAVISLTAGGVGEQDINGQFTFLEDGKNIPLKFSGKYVVV PRPNSATISADKMNVVYRGVVNPISVSFAGVDANKIVASAPGLSSAGKPGKYNMSPGQGTEATISVTGTLPNGDKVTDKK TFRIKGIPGPTGTIRGEMGVVKGPKSNLEIATIGAKLLDFDFEVGLDVVGFNMKIAGQPTVVVTGNKMNAQCKSVLARAG KGDQVTISEIKTKLVGAGSYLLPRTAPVIYEIQ >Mature_512_residues AGGKLTPRQKMINLMYLVFIAMLAMNVSKEVISAFGLMNEKFEAANTSSVTTNESLLTSLDQKAAEAKGEFAKAAETAHK VQAASKEFYDYIGTLKTQAVKGFEVDKETGKMPYEAMDRGDNIDDWFTGDGYTKKGNEIIAKIEKYKSDIKAALGTDKKY AGIISEVEKKFDVSDVKNKEGIKEKYLAYHFKGFPAIASAAKLSAWQNDVKKTEADVYNSALGKAAVAAASYSNYQAIVV LDKNAYFQGEKVTGKVVLGRYDENTKPTSFQGPGQIVNGQAVISLTAGGVGEQDINGQFTFLEDGKNIPLKFSGKYVVVP RPNSATISADKMNVVYRGVVNPISVSFAGVDANKIVASAPGLSSAGKPGKYNMSPGQGTEATISVTGTLPNGDKVTDKKT FRIKGIPGPTGTIRGEMGVVKGPKSNLEIATIGAKLLDFDFEVGLDVVGFNMKIAGQPTVVVTGNKMNAQCKSVLARAGK GDQVTISEIKTKLVGAGSYLLPRTAPVIYEIQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54790; Mature: 54659
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGGKLTPRQKMINLMYLVFIAMLAMNVSKEVISAFGLMNEKFEAANTSSVTTNESLLTS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCHHHHHH LDQKAAEAKGEFAKAAETAHKVQAASKEFYDYIGTLKTQAVKGFEVDKETGKMPYEAMDR HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCHHHCCCCHHHHHC GDNIDDWFTGDGYTKKGNEIIAKIEKYKSDIKAALGTDKKYAGIISEVEKKFDVSDVKNK CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHCCCC EGIKEKYLAYHFKGFPAIASAAKLSAWQNDVKKTEADVYNSALGKAAVAAASYSNYQAIV CCHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE VLDKNAYFQGEKVTGKVVLGRYDENTKPTSFQGPGQIVNGQAVISLTAGGVGEQDINGQF EEECCCEECCCEEEEEEEEEEECCCCCCCCCCCCCCEECCEEEEEEECCCCCCCCCCCEE TFLEDGKNIPLKFSGKYVVVPRPNSATISADKMNVVYRGVVNPISVSFAGVDANKIVASA EEEECCCCCCEEECCEEEEEECCCCCEEEHHCEEEEEECCCCCEEEEEECCCHHHEEEEC PGLSSAGKPGKYNMSPGQGTEATISVTGTLPNGDKVTDKKTFRIKGIPGPTGTIRGEMGV CCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCE VKGPKSNLEIATIGAKLLDFDFEVGLDVVGFNMKIAGQPTVVVTGNKMNAQCKSVLARAG EECCCCCCEEEEECCEEEECCHHCCCEEEEEEEEECCCCEEEEECCCCCHHHHHHHHHCC KGDQVTISEIKTKLVGAGSYLLPRTAPVIYEIQ CCCEEEHHHHHHHHHCCCCEECCCCCCEEEEEC >Mature Secondary Structure AGGKLTPRQKMINLMYLVFIAMLAMNVSKEVISAFGLMNEKFEAANTSSVTTNESLLTS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCHHHHHH LDQKAAEAKGEFAKAAETAHKVQAASKEFYDYIGTLKTQAVKGFEVDKETGKMPYEAMDR HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCHHHCCCCHHHHHC GDNIDDWFTGDGYTKKGNEIIAKIEKYKSDIKAALGTDKKYAGIISEVEKKFDVSDVKNK CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHCCCC EGIKEKYLAYHFKGFPAIASAAKLSAWQNDVKKTEADVYNSALGKAAVAAASYSNYQAIV CCHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE VLDKNAYFQGEKVTGKVVLGRYDENTKPTSFQGPGQIVNGQAVISLTAGGVGEQDINGQF EEECCCEECCCEEEEEEEEEEECCCCCCCCCCCCCCEECCEEEEEEECCCCCCCCCCCEE TFLEDGKNIPLKFSGKYVVVPRPNSATISADKMNVVYRGVVNPISVSFAGVDANKIVASA EEEECCCCCCEEECCEEEEEECCCCCEEEHHCEEEEEECCCCCEEEEEECCCHHHEEEEC PGLSSAGKPGKYNMSPGQGTEATISVTGTLPNGDKVTDKKTFRIKGIPGPTGTIRGEMGV CCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCE VKGPKSNLEIATIGAKLLDFDFEVGLDVVGFNMKIAGQPTVVVTGNKMNAQCKSVLARAG EECCCCCCEEEEECCEEEECCHHCCCEEEEEEEEECCCCEEEEECCCCCHHHHHHHHHCC KGDQVTISEIKTKLVGAGSYLLPRTAPVIYEIQ CCCEEEHHHHHHHHHCCCCEECCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA