| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146299580
Identifier: 146299580
GI number: 146299580
Start: 2103585
End: 2104373
Strand: Direct
Name: 146299580
Synonym: Fjoh_1820
Alternate gene names: NA
Gene position: 2103585-2104373 (Clockwise)
Preceding gene: 146299576
Following gene: 146299587
Centisome position: 34.5
GC content: 30.54
Gene sequence:
>789_bases ATGCTTTTTCTCTTTTTAGGTGGAATTTTATTTGGTTTAATAATCGTGTTTAGAATTATTGAACCAACTTATTTACTGCT TTTTAATAAACCGTTGTTTATATTTTGGCATCCTATTTTGAATAAAATGAATGGCGCCGATAAAACAATTTTACGCCGAG AATTTCCATTTTACCTCAATCTTTCAGATAAAAAGAAAGGCTATTTTGAACATCGGGTGAAGTGTTTCATTGATAATTAT AATTTTGACGGAAAAGATATTGAAGTTACACAGGAAATGAAACTCATCATTGCCGGAACTTATGTAATGCTGACTTTTGG AATGCGAACCTATCTCATTCACTTATTTGAGAATATTGTCATTTATCCTTCTGTATATTACTCAACCATTAATGATGCAT ATCATAAAGGAGAATATAATCCGAGAATGAAAACCATTGTTTTTTCATGGGAAGATTTCCTGAGCGGACATCAGACAAAA GATAATATTAATCTTGGACTTCATGAATTTACACATGTCCTGCATTTTCATTCCAGAAAAAGAGCAGATCCTAATGCGAT AATATTCTATGATGAATTTACCGAAATAGAAAAGTATTTTGATAAGGAAGACTTAACAAATAGGCTTAAGGAAAAACAAT ATTTTAGAGATTATGCATATACGAACAAGTTTGAATTTCTTGCCGTAATTCTGGAGCATTTTTTTGAAACTCCGGAAATC TTTAAGAAAGAATTCCCGGAGCTGTTTGAAAATGTAAAAACCATGATTAATTTTAAAGAAGAGGTTTAA
Upstream 100 bases:
>100_bases AGATTATCAAGCGAATATAAAGAAATATTTAATTTCAATTTTATATTTTAGCAAAACAGAGATCAATAAAGCTTTCTGTT TTTTTAATTGAATTAAAACT
Downstream 100 bases:
>100_bases ATTTTTAGTTTACCATGTCTAAAGTCAGAGAAGTATCGCTGCTTTATTACTAAATTGACTTAAACCTTTTTTACTGCAAA AGCAGTTCTGTAAAACTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MLFLFLGGILFGLIIVFRIIEPTYLLLFNKPLFIFWHPILNKMNGADKTILRREFPFYLNLSDKKKGYFEHRVKCFIDNY NFDGKDIEVTQEMKLIIAGTYVMLTFGMRTYLIHLFENIVIYPSVYYSTINDAYHKGEYNPRMKTIVFSWEDFLSGHQTK DNINLGLHEFTHVLHFHSRKRADPNAIIFYDEFTEIEKYFDKEDLTNRLKEKQYFRDYAYTNKFEFLAVILEHFFETPEI FKKEFPELFENVKTMINFKEEV
Sequences:
>Translated_262_residues MLFLFLGGILFGLIIVFRIIEPTYLLLFNKPLFIFWHPILNKMNGADKTILRREFPFYLNLSDKKKGYFEHRVKCFIDNY NFDGKDIEVTQEMKLIIAGTYVMLTFGMRTYLIHLFENIVIYPSVYYSTINDAYHKGEYNPRMKTIVFSWEDFLSGHQTK DNINLGLHEFTHVLHFHSRKRADPNAIIFYDEFTEIEKYFDKEDLTNRLKEKQYFRDYAYTNKFEFLAVILEHFFETPEI FKKEFPELFENVKTMINFKEEV >Mature_262_residues MLFLFLGGILFGLIIVFRIIEPTYLLLFNKPLFIFWHPILNKMNGADKTILRREFPFYLNLSDKKKGYFEHRVKCFIDNY NFDGKDIEVTQEMKLIIAGTYVMLTFGMRTYLIHLFENIVIYPSVYYSTINDAYHKGEYNPRMKTIVFSWEDFLSGHQTK DNINLGLHEFTHVLHFHSRKRADPNAIIFYDEFTEIEKYFDKEDLTNRLKEKQYFRDYAYTNKFEFLAVILEHFFETPEI FKKEFPELFENVKTMINFKEEV
Specific function: Unknown
COG id: COG3228
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31654; Mature: 31654
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFLFLGGILFGLIIVFRIIEPTYLLLFNKPLFIFWHPILNKMNGADKTILRREFPFYLN CHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEHHHHHHCCCCCHHHHHHCCCEEEE LSDKKKGYFEHRVKCFIDNYNFDGKDIEVTQEMKLIIAGTYVMLTFGMRTYLIHLFENIV CCCCCCCHHHHHHEEEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IYPSVYYSTINDAYHKGEYNPRMKTIVFSWEDFLSGHQTKDNINLGLHEFTHVLHFHSRK CCCHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHC RADPNAIIFYDEFTEIEKYFDKEDLTNRLKEKQYFRDYAYTNKFEFLAVILEHFFETPEI CCCCCEEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHH FKKEFPELFENVKTMINFKEEV HHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLFLFLGGILFGLIIVFRIIEPTYLLLFNKPLFIFWHPILNKMNGADKTILRREFPFYLN CHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEHHHHHHCCCCCHHHHHHCCCEEEE LSDKKKGYFEHRVKCFIDNYNFDGKDIEVTQEMKLIIAGTYVMLTFGMRTYLIHLFENIV CCCCCCCHHHHHHEEEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IYPSVYYSTINDAYHKGEYNPRMKTIVFSWEDFLSGHQTKDNINLGLHEFTHVLHFHSRK CCCHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHC RADPNAIIFYDEFTEIEKYFDKEDLTNRLKEKQYFRDYAYTNKFEFLAVILEHFFETPEI CCCCCEEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHH FKKEFPELFENVKTMINFKEEV HHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA