| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146299475
Identifier: 146299475
GI number: 146299475
Start: 1983805
End: 1984842
Strand: Direct
Name: 146299475
Synonym: Fjoh_1715
Alternate gene names: NA
Gene position: 1983805-1984842 (Clockwise)
Preceding gene: 146299474
Following gene: 146299479
Centisome position: 32.54
GC content: 31.6
Gene sequence:
>1038_bases ATGCGTGGCTTGACTAAGAATATTGGAAAACCCAAAACAGAACGAGATATTATTTTGGTTGATAAAACTGAAATAAAACG AGTTTTAATCTGCAGACCCAACGGAAGACTTGGTAATCTTTTATTAATTACACCGCTCGTTCAGGAAGTAGAGGAAATGT TTCCAAATTGTAAAATTGATTTATTTGTAAAAGGTGGATTAGCGCCAATTATTTTCGAAAATTATCCAGTCCTTAATAAA ACAATCCATCTGCCTAAAAAACCTTTTAAAAATTTAATCGAATATATTAAGGTTTGGATTTCGATTACAAGTGAGCCTTA CGACATGGCAATAAATGTCGACCAAAATTCTTCTTCTGGAAGATTAGCTGTAAAATTCTCAAGAGCAAGATATAAATTTT ACGGAGATCTTGATGGTGAATTATCAGAACCTAAAAATGATTATGACCATATAGCTAAATATCCAGTTTATAACTTTCGT ACTTATTTAACCAAACTTGGACTTCCAAAAAGAAATAAGATAATAGAATCTTTAGATCTTAAACTTAATGTTGCAGAAAT TGCTAACGGAAAGAAAATTTTAGATCACATAATTGATCCTTCTAAACGAACAATTTGTTTGTTTACTTATGCTACCGGAG CAAAATGTTTTTCTGAAGAATGGTGGGAGAGTTTTTATTCTAAACTAAAAGCCGAATATAAAAATTATAATATCATCGAA ATATTACCAATTGAGAATGTTTCTCAAATTGGATTTCAGGCTCCAACATATTACAGTAAAGATATTCGTGAAATGGGGTC AGTGCTGGCAAATGTAGATTTGTTTATTGGTGCAGACAGTGGTATTATGCACCTGGCGAGTTCTGTTCAAACGCCTACGA TTGGTTTGTTCTCTGTTTCAGAATTAAAAAAATATGAACCTTATGACAGCGGCAGTGTAGGAATAGATACAAAAGAATGC TTACAGCCGGAATATTTCAAAATTATTAATTCAATTTTAGAAAACGGAAAATTAAGAGTATATCCTAAAGCAGTATAA
Upstream 100 bases:
>100_bases TGTCTATCTAGGCTTTTTTTGATAAGACCAAATTCTTTAATCCTTAATTATTGTATAGATGAGTGTTTCAGGTAAAATAA ATCATTTTAGGCGGGGCTTA
Downstream 100 bases:
>100_bases AAAATAGCAGTATAAAAAAAGAGGCCAATCATTACGATTGGCCTTTATTTTTATAATTAGTTTTTCTTCTTGAAAAGTCC GTTTATTAAATCAGTTGCTT
Product: ADP-heptose:LPS heptosyltransferase-like protein
Products: NA
Alternate protein names: Glycosyl Transferase Family Protein
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MRGLTKNIGKPKTERDIILVDKTEIKRVLICRPNGRLGNLLLITPLVQEVEEMFPNCKIDLFVKGGLAPIIFENYPVLNK TIHLPKKPFKNLIEYIKVWISITSEPYDMAINVDQNSSSGRLAVKFSRARYKFYGDLDGELSEPKNDYDHIAKYPVYNFR TYLTKLGLPKRNKIIESLDLKLNVAEIANGKKILDHIIDPSKRTICLFTYATGAKCFSEEWWESFYSKLKAEYKNYNIIE ILPIENVSQIGFQAPTYYSKDIREMGSVLANVDLFIGADSGIMHLASSVQTPTIGLFSVSELKKYEPYDSGSVGIDTKEC LQPEYFKIINSILENGKLRVYPKAV
Sequences:
>Translated_345_residues MRGLTKNIGKPKTERDIILVDKTEIKRVLICRPNGRLGNLLLITPLVQEVEEMFPNCKIDLFVKGGLAPIIFENYPVLNK TIHLPKKPFKNLIEYIKVWISITSEPYDMAINVDQNSSSGRLAVKFSRARYKFYGDLDGELSEPKNDYDHIAKYPVYNFR TYLTKLGLPKRNKIIESLDLKLNVAEIANGKKILDHIIDPSKRTICLFTYATGAKCFSEEWWESFYSKLKAEYKNYNIIE ILPIENVSQIGFQAPTYYSKDIREMGSVLANVDLFIGADSGIMHLASSVQTPTIGLFSVSELKKYEPYDSGSVGIDTKEC LQPEYFKIINSILENGKLRVYPKAV >Mature_345_residues MRGLTKNIGKPKTERDIILVDKTEIKRVLICRPNGRLGNLLLITPLVQEVEEMFPNCKIDLFVKGGLAPIIFENYPVLNK TIHLPKKPFKNLIEYIKVWISITSEPYDMAINVDQNSSSGRLAVKFSRARYKFYGDLDGELSEPKNDYDHIAKYPVYNFR TYLTKLGLPKRNKIIESLDLKLNVAEIANGKKILDHIIDPSKRTICLFTYATGAKCFSEEWWESFYSKLKAEYKNYNIIE ILPIENVSQIGFQAPTYYSKDIREMGSVLANVDLFIGADSGIMHLASSVQTPTIGLFSVSELKKYEPYDSGSVGIDTKEC LQPEYFKIINSILENGKLRVYPKAV
Specific function: Unknown
COG id: COG0859
COG function: function code M; ADP-heptose:LPS heptosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39329; Mature: 39329
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGLTKNIGKPKTERDIILVDKTEIKRVLICRPNGRLGNLLLITPLVQEVEEMFPNCKID CCCCCCCCCCCCCCCCEEEEEHHCCCEEEEECCCCCCCCEEEEHHHHHHHHHHCCCCEEE LFVKGGLAPIIFENYPVLNKTIHLPKKPFKNLIEYIKVWISITSEPYDMAINVDQNSSSG EEEECCCCEEEECCCCCCCCEECCCCHHHHHHHHHHHHHHEECCCCEEEEEEECCCCCCC RLAVKFSRARYKFYGDLDGELSEPKNDYDHIAKYPVYNFRTYLTKLGLPKRNKIIESLDL EEEEEEECCEEEEECCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHCC KLNVAEIANGKKILDHIIDPSKRTICLFTYATGAKCFSEEWWESFYSKLKAEYKNYNIIE EEEHHHHCCCHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEE ILPIENVSQIGFQAPTYYSKDIREMGSVLANVDLFIGADSGIMHLASSVQTPTIGLFSVS EEECCCHHHHCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHCCCCCEEEEEHH ELKKYEPYDSGSVGIDTKECLQPEYFKIINSILENGKLRVYPKAV HHHHCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHCCCEEEEECCC >Mature Secondary Structure MRGLTKNIGKPKTERDIILVDKTEIKRVLICRPNGRLGNLLLITPLVQEVEEMFPNCKID CCCCCCCCCCCCCCCCEEEEEHHCCCEEEEECCCCCCCCEEEEHHHHHHHHHHCCCCEEE LFVKGGLAPIIFENYPVLNKTIHLPKKPFKNLIEYIKVWISITSEPYDMAINVDQNSSSG EEEECCCCEEEECCCCCCCCEECCCCHHHHHHHHHHHHHHEECCCCEEEEEEECCCCCCC RLAVKFSRARYKFYGDLDGELSEPKNDYDHIAKYPVYNFRTYLTKLGLPKRNKIIESLDL EEEEEEECCEEEEECCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHCC KLNVAEIANGKKILDHIIDPSKRTICLFTYATGAKCFSEEWWESFYSKLKAEYKNYNIIE EEEHHHHCCCHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEE ILPIENVSQIGFQAPTYYSKDIREMGSVLANVDLFIGADSGIMHLASSVQTPTIGLFSVS EEECCCHHHHCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHCCCCCEEEEEHH ELKKYEPYDSGSVGIDTKECLQPEYFKIINSILENGKLRVYPKAV HHHHCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA