| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is yeaZ [H]
Identifier: 146299433
GI number: 146299433
Start: 1942829
End: 1943500
Strand: Direct
Name: yeaZ [H]
Synonym: Fjoh_1673
Alternate gene names: 146299433
Gene position: 1942829-1943500 (Clockwise)
Preceding gene: 146299432
Following gene: 146299437
Centisome position: 31.87
GC content: 34.38
Gene sequence:
>672_bases TTGTCTTTTATTCTCAATATCGAAACAGCAACCAAAAATTGTTCAGTATCAATTGCAAAAAATGGAGAAACTATTCTTTG TAAAGAAATTGCAGAAGAAGGATATTCGCACGCCGAAAAACTTCATGTTTTTATTGAAGAAGCTATTGCAGAATCTGGAG TTTCAATTCAGGATTTAAATGCAGTTGCAGTAAGCCAGGGGCCAGGTTCTTATACCGGGTTACGAATTGGCGTTTCGGCA GCAAAAGGATTGTGTTATGCATTAAATATCCCTTTAATTGCGGTAGATACTTTGCAGACTCTGGCCTCTAAAGCTAAAAT TTCTGAAGGAAAAATTATTCCGATGCTTGATGCCAGAAGGATGGAAGTTTACAGCGAAATTTTTAATGCAGATTTAGAAG TAGAAAGAACAATTCAGGCAGAAATTATTACAGAAGATTCTTTTGCAGCATATAAAGAAACACTTTATTTCGTAGGAGAT TGTGCGGAGAAATGCAAACCTGTTTTGACTAAAGATAACTTTGTGTTTTTAGAAGAAATCAAATATCCTTCGGCAAATGA AATGAGTAAAATCAGTTACGATAAGTATCAAAAAAGCGACACTGTTGATGTCGCTTACTTTGAACCTTATTATTTAAAAG ATTTTATGATGACACTGCCTAAAAAGCAGTAA
Upstream 100 bases:
>100_bases AAAGCTGACGCTCCTAAAAAATAAATAAGATATATTTGTCAGGCTGAGCAGAATTAAGTTTTCTCTCAGCCTGAAATAAT TAATTTTAAAATCATACACA
Downstream 100 bases:
>100_bases TCCATTTTTATTTTTGAAGTGTAAAAGGCTGAACAGAAATTCCTGCCTGATCTAAAGCTGTTTTACAATCTTCGAGCGTT TCAGAAAAAACAGCTCCATA
Product: peptidase M22, glycoprotease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MSFILNIETATKNCSVSIAKNGETILCKEIAEEGYSHAEKLHVFIEEAIAESGVSIQDLNAVAVSQGPGSYTGLRIGVSA AKGLCYALNIPLIAVDTLQTLASKAKISEGKIIPMLDARRMEVYSEIFNADLEVERTIQAEIITEDSFAAYKETLYFVGD CAEKCKPVLTKDNFVFLEEIKYPSANEMSKISYDKYQKSDTVDVAYFEPYYLKDFMMTLPKKQ
Sequences:
>Translated_223_residues MSFILNIETATKNCSVSIAKNGETILCKEIAEEGYSHAEKLHVFIEEAIAESGVSIQDLNAVAVSQGPGSYTGLRIGVSA AKGLCYALNIPLIAVDTLQTLASKAKISEGKIIPMLDARRMEVYSEIFNADLEVERTIQAEIITEDSFAAYKETLYFVGD CAEKCKPVLTKDNFVFLEEIKYPSANEMSKISYDKYQKSDTVDVAYFEPYYLKDFMMTLPKKQ >Mature_222_residues SFILNIETATKNCSVSIAKNGETILCKEIAEEGYSHAEKLHVFIEEAIAESGVSIQDLNAVAVSQGPGSYTGLRIGVSAA KGLCYALNIPLIAVDTLQTLASKAKISEGKIIPMLDARRMEVYSEIFNADLEVERTIQAEIITEDSFAAYKETLYFVGDC AEKCKPVLTKDNFVFLEEIKYPSANEMSKISYDKYQKSDTVDVAYFEPYYLKDFMMTLPKKQ
Specific function: Unknown
COG id: COG1214
COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M22 family [H]
Homologues:
Organism=Escherichia coli, GI1788109, Length=233, Percent_Identity=30.9012875536481, Blast_Score=110, Evalue=7e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022496 - InterPro: IPR000905 [H]
Pfam domain/function: PF00814 Peptidase_M22 [H]
EC number: NA
Molecular weight: Translated: 24809; Mature: 24677
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFILNIETATKNCSVSIAKNGETILCKEIAEEGYSHAEKLHVFIEEAIAESGVSIQDLN CEEEEEEEECCCCCEEEEECCCCEEEHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEECC AVAVSQGPGSYTGLRIGVSAAKGLCYALNIPLIAVDTLQTLASKAKISEGKIIPMLDARR EEEEECCCCCCCEEEEEHHHHCCEEEEECCCEEEHHHHHHHHHHHCCCCCCEEECCCHHH MEVYSEIFNADLEVERTIQAEIITEDSFAAYKETLYFVGDCAEKCKPVLTKDNFVFLEEI HHHHHHHHCCCCEEEEEEEEEEEECCHHHHHHHHHHHEEHHHHHCCCCCCCCCEEEEEEC KYPSANEMSKISYDKYQKSDTVDVAYFEPYYLKDFMMTLPKKQ CCCCCCCHHHCCHHHHCCCCCEEEEEECCHHHHHHHHHCCCCC >Mature Secondary Structure SFILNIETATKNCSVSIAKNGETILCKEIAEEGYSHAEKLHVFIEEAIAESGVSIQDLN EEEEEEEECCCCCEEEEECCCCEEEHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEECC AVAVSQGPGSYTGLRIGVSAAKGLCYALNIPLIAVDTLQTLASKAKISEGKIIPMLDARR EEEEECCCCCCCEEEEEHHHHCCEEEEECCCEEEHHHHHHHHHHHCCCCCCEEECCCHHH MEVYSEIFNADLEVERTIQAEIITEDSFAAYKETLYFVGDCAEKCKPVLTKDNFVFLEEI HHHHHHHHCCCCEEEEEEEEEEEECCHHHHHHHHHHHEEHHHHHCCCCCCCCCEEEEEEC KYPSANEMSKISYDKYQKSDTVDVAYFEPYYLKDFMMTLPKKQ CCCCCCCHHHCCHHHHCCCCCEEEEEECCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]