| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is cyoC [C]
Identifier: 146299420
GI number: 146299420
Start: 1930432
End: 1931418
Strand: Direct
Name: cyoC [C]
Synonym: Fjoh_1660
Alternate gene names: 146299420
Gene position: 1930432-1931418 (Clockwise)
Preceding gene: 146299419
Following gene: 146299421
Centisome position: 31.66
GC content: 35.26
Gene sequence:
>987_bases ATGGAAGCGACAGTTACTACTGCAAATAACGACGAAAAAACTTGGGGAGGCGGTCATGAAATCCAGCCGTTAGGATCAAG TTATGGTAAAATGATGATGTGGTTTTTTATCGTATCGGATGCCTTAACATTTTCTGGATTCTTAGGGGCTTATGGTTTTT CTAGATTTAAATTTATTGAAACTTGGCCATTGGCTGATGAAGTGTTTACTCACTTTCCTTTTATGCATGGTGTTTCGGCT CCTATGTATTATGTAGCCTTAATGACTTTTATCTTGATTTTCTCATCTGTAACAATGGTATTAGCTGTTGATGCAGGTCA CCAATTAAAGAAAACAAAAGTTGCTGTTTACATGTTCTTAACTATTATTGGAGGTTTAATTTTCGTAGGCTCACAAGCTT GGGAGTGGAAAAACTTCATTAAAGGAGAATATGGTGCAGTTGAAACACATGGCGGAAGTTTATTGCAGTTTGTTAAAGCA GATGGAACAAGAGTTGCTCTTGCAGATTTCGCAGTAAAATTACCAGAACAAAGAGAGGCTTTAACAAGAAGCAAAACTAC TTGGTTCATGGAAGATGCTCAATCTTTGCCAACTTATTCTGTAGCAGAAATTCAAGCAGGATTTAAAGCACATCCAGATT TACTAGTAAGAACAGAAACTCTTACTAAAGATAAAAAGAAAACAGTTTTGTCAAGACAAGAGTCTGAGACTCGTCTGGCA GAAGCTAAATATGTTGTAGAAGGTGCAAACTTAATTAGAAACGAATACGGTAATAAATTATTTGCTGATTTCTTCTTCTT CATCACAGGATTCCACGGATTCCACGTATTTTCTGGAGTTATCATTAATATCATTATTTTCTTTAATGTATTATTAGGAA CTTACGAGAAAAGAAGAAGCTACGAAATGGTAGAGAAAGTTGGTTTATACTGGCACTTCGTAGATTTAGTTTGGGTATTT GTATTTACAGTTTTCTACCTAGTTTAA
Upstream 100 bases:
>100_bases GCACTTTTTAGACCTATTGTGGGTATTATTATTTTTATTTTTATATTTCTTTAAATAAGAAAAAAACGTAAATTTGGGAA CTTTTTAACGAATATCTTTT
Downstream 100 bases:
>100_bases TTTTAGAATTTAATTATTATGTCACACGAGCACGTATCAAATACAAAAAGAATCTGGTTTGTTTTCGCATTACTTTCAGT AGTAACTACAGTAGAAGTTA
Product: cytochrome c oxidase subunit III
Products: ferricytochrome c; H2O
Alternate protein names: Cytochrome-C Oxidase Subunit III Oxidoreductase Protein; Cytochrome O Ubiquinol Oxidase Subunit III; Transmembrane Cytochrome Oxidase Subunit; Cytochrome C Oxidase Subunit III Subfamily Protein; Cytochrome C Oxidase; Cytochrome C Oxidase Family Protein; Cytochrome-C Oxidase Subunit III Protein
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MEATVTTANNDEKTWGGGHEIQPLGSSYGKMMMWFFIVSDALTFSGFLGAYGFSRFKFIETWPLADEVFTHFPFMHGVSA PMYYVALMTFILIFSSVTMVLAVDAGHQLKKTKVAVYMFLTIIGGLIFVGSQAWEWKNFIKGEYGAVETHGGSLLQFVKA DGTRVALADFAVKLPEQREALTRSKTTWFMEDAQSLPTYSVAEIQAGFKAHPDLLVRTETLTKDKKKTVLSRQESETRLA EAKYVVEGANLIRNEYGNKLFADFFFFITGFHGFHVFSGVIINIIIFFNVLLGTYEKRRSYEMVEKVGLYWHFVDLVWVF VFTVFYLV
Sequences:
>Translated_328_residues MEATVTTANNDEKTWGGGHEIQPLGSSYGKMMMWFFIVSDALTFSGFLGAYGFSRFKFIETWPLADEVFTHFPFMHGVSA PMYYVALMTFILIFSSVTMVLAVDAGHQLKKTKVAVYMFLTIIGGLIFVGSQAWEWKNFIKGEYGAVETHGGSLLQFVKA DGTRVALADFAVKLPEQREALTRSKTTWFMEDAQSLPTYSVAEIQAGFKAHPDLLVRTETLTKDKKKTVLSRQESETRLA EAKYVVEGANLIRNEYGNKLFADFFFFITGFHGFHVFSGVIINIIIFFNVLLGTYEKRRSYEMVEKVGLYWHFVDLVWVF VFTVFYLV >Mature_328_residues MEATVTTANNDEKTWGGGHEIQPLGSSYGKMMMWFFIVSDALTFSGFLGAYGFSRFKFIETWPLADEVFTHFPFMHGVSA PMYYVALMTFILIFSSVTMVLAVDAGHQLKKTKVAVYMFLTIIGGLIFVGSQAWEWKNFIKGEYGAVETHGGSLLQFVKA DGTRVALADFAVKLPEQREALTRSKTTWFMEDAQSLPTYSVAEIQAGFKAHPDLLVRTETLTKDKKKTVLSRQESETRLA EAKYVVEGANLIRNEYGNKLFADFFFFITGFHGFHVFSGVIINIIIFFNVLLGTYEKRRSYEMVEKVGLYWHFVDLVWVF VFTVFYLV
Specific function: Cytochrome O Terminal Oxidase Complex Is The Component Of The Aerobic Respiratory Chain Of E.Coli That Predominates When Cells Are Grown At High Aeration. [C]
COG id: COG1845
COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 3
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.9.3.1
Molecular weight: Translated: 37318; Mature: 37318
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: PS50253 COX3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEATVTTANNDEKTWGGGHEIQPLGSSYGKMMMWFFIVSDALTFSGFLGAYGFSRFKFIE CCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEE TWPLADEVFTHFPFMHGVSAPMYYVALMTFILIFSSVTMVLAVDAGHQLKKTKVAVYMFL CCCCHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHH TIIGGLIFVGSQAWEWKNFIKGEYGAVETHGGSLLQFVKADGTRVALADFAVKLPEQREA HHHHHHHHHCCCCHHHHHHHCCCCCCEECCCCHHHHHHHCCCCEEEHHHHHHHCCHHHHH LTRSKTTWFMEDAQSLPTYSVAEIQAGFKAHPDLLVRTETLTKDKKKTVLSRQESETRLA HHHHCCHHHHHHHHCCCCCHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH EAKYVVEGANLIRNEYGNKLFADFFFFITGFHGFHVFSGVIINIIIFFNVLLGTYEKRRS HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YEMVEKVGLYWHFVDLVWVFVFTVFYLV HHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MEATVTTANNDEKTWGGGHEIQPLGSSYGKMMMWFFIVSDALTFSGFLGAYGFSRFKFIE CCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEE TWPLADEVFTHFPFMHGVSAPMYYVALMTFILIFSSVTMVLAVDAGHQLKKTKVAVYMFL CCCCHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHH TIIGGLIFVGSQAWEWKNFIKGEYGAVETHGGSLLQFVKADGTRVALADFAVKLPEQREA HHHHHHHHHCCCCHHHHHHHCCCCCCEECCCCHHHHHHHCCCCEEEHHHHHHHCCHHHHH LTRSKTTWFMEDAQSLPTYSVAEIQAGFKAHPDLLVRTETLTKDKKKTVLSRQESETRLA HHHHCCHHHHHHHHCCCCCHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH EAKYVVEGANLIRNEYGNKLFADFFFFITGFHGFHVFSGVIINIIIFFNVLLGTYEKRRS HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YEMVEKVGLYWHFVDLVWVFVFTVFYLV HHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ferrocytochrome c; O2
Specific reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA