Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is cyoC [C]

Identifier: 146299420

GI number: 146299420

Start: 1930432

End: 1931418

Strand: Direct

Name: cyoC [C]

Synonym: Fjoh_1660

Alternate gene names: 146299420

Gene position: 1930432-1931418 (Clockwise)

Preceding gene: 146299419

Following gene: 146299421

Centisome position: 31.66

GC content: 35.26

Gene sequence:

>987_bases
ATGGAAGCGACAGTTACTACTGCAAATAACGACGAAAAAACTTGGGGAGGCGGTCATGAAATCCAGCCGTTAGGATCAAG
TTATGGTAAAATGATGATGTGGTTTTTTATCGTATCGGATGCCTTAACATTTTCTGGATTCTTAGGGGCTTATGGTTTTT
CTAGATTTAAATTTATTGAAACTTGGCCATTGGCTGATGAAGTGTTTACTCACTTTCCTTTTATGCATGGTGTTTCGGCT
CCTATGTATTATGTAGCCTTAATGACTTTTATCTTGATTTTCTCATCTGTAACAATGGTATTAGCTGTTGATGCAGGTCA
CCAATTAAAGAAAACAAAAGTTGCTGTTTACATGTTCTTAACTATTATTGGAGGTTTAATTTTCGTAGGCTCACAAGCTT
GGGAGTGGAAAAACTTCATTAAAGGAGAATATGGTGCAGTTGAAACACATGGCGGAAGTTTATTGCAGTTTGTTAAAGCA
GATGGAACAAGAGTTGCTCTTGCAGATTTCGCAGTAAAATTACCAGAACAAAGAGAGGCTTTAACAAGAAGCAAAACTAC
TTGGTTCATGGAAGATGCTCAATCTTTGCCAACTTATTCTGTAGCAGAAATTCAAGCAGGATTTAAAGCACATCCAGATT
TACTAGTAAGAACAGAAACTCTTACTAAAGATAAAAAGAAAACAGTTTTGTCAAGACAAGAGTCTGAGACTCGTCTGGCA
GAAGCTAAATATGTTGTAGAAGGTGCAAACTTAATTAGAAACGAATACGGTAATAAATTATTTGCTGATTTCTTCTTCTT
CATCACAGGATTCCACGGATTCCACGTATTTTCTGGAGTTATCATTAATATCATTATTTTCTTTAATGTATTATTAGGAA
CTTACGAGAAAAGAAGAAGCTACGAAATGGTAGAGAAAGTTGGTTTATACTGGCACTTCGTAGATTTAGTTTGGGTATTT
GTATTTACAGTTTTCTACCTAGTTTAA

Upstream 100 bases:

>100_bases
GCACTTTTTAGACCTATTGTGGGTATTATTATTTTTATTTTTATATTTCTTTAAATAAGAAAAAAACGTAAATTTGGGAA
CTTTTTAACGAATATCTTTT

Downstream 100 bases:

>100_bases
TTTTAGAATTTAATTATTATGTCACACGAGCACGTATCAAATACAAAAAGAATCTGGTTTGTTTTCGCATTACTTTCAGT
AGTAACTACAGTAGAAGTTA

Product: cytochrome c oxidase subunit III

Products: ferricytochrome c; H2O

Alternate protein names: Cytochrome-C Oxidase Subunit III Oxidoreductase Protein; Cytochrome O Ubiquinol Oxidase Subunit III; Transmembrane Cytochrome Oxidase Subunit; Cytochrome C Oxidase Subunit III Subfamily Protein; Cytochrome C Oxidase; Cytochrome C Oxidase Family Protein; Cytochrome-C Oxidase Subunit III Protein

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MEATVTTANNDEKTWGGGHEIQPLGSSYGKMMMWFFIVSDALTFSGFLGAYGFSRFKFIETWPLADEVFTHFPFMHGVSA
PMYYVALMTFILIFSSVTMVLAVDAGHQLKKTKVAVYMFLTIIGGLIFVGSQAWEWKNFIKGEYGAVETHGGSLLQFVKA
DGTRVALADFAVKLPEQREALTRSKTTWFMEDAQSLPTYSVAEIQAGFKAHPDLLVRTETLTKDKKKTVLSRQESETRLA
EAKYVVEGANLIRNEYGNKLFADFFFFITGFHGFHVFSGVIINIIIFFNVLLGTYEKRRSYEMVEKVGLYWHFVDLVWVF
VFTVFYLV

Sequences:

>Translated_328_residues
MEATVTTANNDEKTWGGGHEIQPLGSSYGKMMMWFFIVSDALTFSGFLGAYGFSRFKFIETWPLADEVFTHFPFMHGVSA
PMYYVALMTFILIFSSVTMVLAVDAGHQLKKTKVAVYMFLTIIGGLIFVGSQAWEWKNFIKGEYGAVETHGGSLLQFVKA
DGTRVALADFAVKLPEQREALTRSKTTWFMEDAQSLPTYSVAEIQAGFKAHPDLLVRTETLTKDKKKTVLSRQESETRLA
EAKYVVEGANLIRNEYGNKLFADFFFFITGFHGFHVFSGVIINIIIFFNVLLGTYEKRRSYEMVEKVGLYWHFVDLVWVF
VFTVFYLV
>Mature_328_residues
MEATVTTANNDEKTWGGGHEIQPLGSSYGKMMMWFFIVSDALTFSGFLGAYGFSRFKFIETWPLADEVFTHFPFMHGVSA
PMYYVALMTFILIFSSVTMVLAVDAGHQLKKTKVAVYMFLTIIGGLIFVGSQAWEWKNFIKGEYGAVETHGGSLLQFVKA
DGTRVALADFAVKLPEQREALTRSKTTWFMEDAQSLPTYSVAEIQAGFKAHPDLLVRTETLTKDKKKTVLSRQESETRLA
EAKYVVEGANLIRNEYGNKLFADFFFFITGFHGFHVFSGVIINIIIFFNVLLGTYEKRRSYEMVEKVGLYWHFVDLVWVF
VFTVFYLV

Specific function: Cytochrome O Terminal Oxidase Complex Is The Component Of The Aerobic Respiratory Chain Of E.Coli That Predominates When Cells Are Grown At High Aeration. [C]

COG id: COG1845

COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 3

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.9.3.1

Molecular weight: Translated: 37318; Mature: 37318

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: PS50253 COX3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEATVTTANNDEKTWGGGHEIQPLGSSYGKMMMWFFIVSDALTFSGFLGAYGFSRFKFIE
CCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEE
TWPLADEVFTHFPFMHGVSAPMYYVALMTFILIFSSVTMVLAVDAGHQLKKTKVAVYMFL
CCCCHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHH
TIIGGLIFVGSQAWEWKNFIKGEYGAVETHGGSLLQFVKADGTRVALADFAVKLPEQREA
HHHHHHHHHCCCCHHHHHHHCCCCCCEECCCCHHHHHHHCCCCEEEHHHHHHHCCHHHHH
LTRSKTTWFMEDAQSLPTYSVAEIQAGFKAHPDLLVRTETLTKDKKKTVLSRQESETRLA
HHHHCCHHHHHHHHCCCCCHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH
EAKYVVEGANLIRNEYGNKLFADFFFFITGFHGFHVFSGVIINIIIFFNVLLGTYEKRRS
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YEMVEKVGLYWHFVDLVWVFVFTVFYLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MEATVTTANNDEKTWGGGHEIQPLGSSYGKMMMWFFIVSDALTFSGFLGAYGFSRFKFIE
CCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEE
TWPLADEVFTHFPFMHGVSAPMYYVALMTFILIFSSVTMVLAVDAGHQLKKTKVAVYMFL
CCCCHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHH
TIIGGLIFVGSQAWEWKNFIKGEYGAVETHGGSLLQFVKADGTRVALADFAVKLPEQREA
HHHHHHHHHCCCCHHHHHHHCCCCCCEECCCCHHHHHHHCCCCEEEHHHHHHHCCHHHHH
LTRSKTTWFMEDAQSLPTYSVAEIQAGFKAHPDLLVRTETLTKDKKKTVLSRQESETRLA
HHHHCCHHHHHHHHCCCCCHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH
EAKYVVEGANLIRNEYGNKLFADFFFFITGFHGFHVFSGVIINIIIFFNVLLGTYEKRRS
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YEMVEKVGLYWHFVDLVWVFVFTVFYLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ferrocytochrome c; O2

Specific reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA