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The map label for this gene is ruvA [H]

Identifier: 146299412

GI number: 146299412

Start: 1917094

End: 1917675

Strand: Direct

Name: ruvA [H]

Synonym: Fjoh_1652

Alternate gene names: 146299412

Gene position: 1917094-1917675 (Clockwise)

Preceding gene: 146299411

Following gene: 146299413

Centisome position: 31.44

GC content: 35.22

Gene sequence:

>582_bases
ATGATAGCACATTTGCAGGGAAAATTAGTCGAAAAGAATCCCACAGAAGTTGTAATTGATTGCGGAGGAGTGGGATACCA
CGTAAATATTTCGTTACATACTTTTTCATTAATTCCAAATGCTGATTTTATAAAATTGTATACGCATCTTCAAATCAAAG
AAGATGCGCATACTTTATATGGTTTTGTAGAAAAGTCTGAACGTGAGATATTTAGAATGCTGTTATCTGTTTCAGGAATT
GGAGCCGGCATCGCACGAACAATGCTTTCGTCTATAGAACCCAGACAAATTATTAATGCCATTGCCTCAGGAGATGTTGG
AGTTATCCAGTCTATAAAAGGTATTGGAAACAAAACAGCACAGCGAGTAATACTTGATTTAAAAGAAAAAGTGTTAAAGT
TGTACGATTTAGACGAAGTTTCTGTTGTCCAAAACAATACAAATCGAGATGAAGCGTTATCTGCTTTGGAAGTTTTAGGA
TTCGTTCGTAAAACATCTGAAAAAGTAGTGGAAAAAATCGTCAAAGAAGATCCGGAAGCTACTGTTGAAACGATCATCAA
AAAGGCCTTAAAAAGCTTATAA

Upstream 100 bases:

>100_bases
GAACAAATTAGCAAAATAATTCACTAAAAAATAGGACAAAATAATATTGTCCTATTTTTATTGCATTTTTACTATATTTG
GATTCTTACTAAATTATATT

Downstream 100 bases:

>100_bases
AATCAATTTTATATAACCAATTGTATGCGTAAAATTTGTATTTTTTTACTGGTTTTATTTTGTGGTAACGTTTTGCGGTC
ACAAGTAAAACCGGCGGTTC

Product: Holliday junction DNA helicase RuvA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MIAHLQGKLVEKNPTEVVIDCGGVGYHVNISLHTFSLIPNADFIKLYTHLQIKEDAHTLYGFVEKSEREIFRMLLSVSGI
GAGIARTMLSSIEPRQIINAIASGDVGVIQSIKGIGNKTAQRVILDLKEKVLKLYDLDEVSVVQNNTNRDEALSALEVLG
FVRKTSEKVVEKIVKEDPEATVETIIKKALKSL

Sequences:

>Translated_193_residues
MIAHLQGKLVEKNPTEVVIDCGGVGYHVNISLHTFSLIPNADFIKLYTHLQIKEDAHTLYGFVEKSEREIFRMLLSVSGI
GAGIARTMLSSIEPRQIINAIASGDVGVIQSIKGIGNKTAQRVILDLKEKVLKLYDLDEVSVVQNNTNRDEALSALEVLG
FVRKTSEKVVEKIVKEDPEATVETIIKKALKSL
>Mature_193_residues
MIAHLQGKLVEKNPTEVVIDCGGVGYHVNISLHTFSLIPNADFIKLYTHLQIKEDAHTLYGFVEKSEREIFRMLLSVSGI
GAGIARTMLSSIEPRQIINAIASGDVGVIQSIKGIGNKTAQRVILDLKEKVLKLYDLDEVSVVQNNTNRDEALSALEVLG
FVRKTSEKVVEKIVKEDPEATVETIIKKALKSL

Specific function: The ruvA-ruvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is an helicase that mediates the Holliday

COG id: COG0632

COG function: function code L; Holliday junction resolvasome, DNA-binding subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ruvA family [H]

Homologues:

Organism=Escherichia coli, GI1788168, Length=203, Percent_Identity=35.4679802955665, Blast_Score=130, Evalue=7e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011114
- InterPro:   IPR013849
- InterPro:   IPR003583
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000085
- InterPro:   IPR010994 [H]

Pfam domain/function: PF07499 RuvA_C; PF01330 RuvA_N [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 21280; Mature: 21280

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAHLQGKLVEKNPTEVVIDCGGVGYHVNISLHTFSLIPNADFIKLYTHLQIKEDAHTLY
CCCCCCCEEECCCCCEEEEECCCCEEEEEEEEEEEEECCCCCCEEHHHHEEEHHHHHHHH
GFVEKSEREIFRMLLSVSGIGAGIARTMLSSIEPRQIINAIASGDVGVIQSIKGIGNKTA
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCHHHH
QRVILDLKEKVLKLYDLDEVSVVQNNTNRDEALSALEVLGFVRKTSEKVVEKIVKEDPEA
HHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
TVETIIKKALKSL
HHHHHHHHHHHCC
>Mature Secondary Structure
MIAHLQGKLVEKNPTEVVIDCGGVGYHVNISLHTFSLIPNADFIKLYTHLQIKEDAHTLY
CCCCCCCEEECCCCCEEEEECCCCEEEEEEEEEEEEECCCCCCEEHHHHEEEHHHHHHHH
GFVEKSEREIFRMLLSVSGIGAGIARTMLSSIEPRQIINAIASGDVGVIQSIKGIGNKTA
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCHHHH
QRVILDLKEKVLKLYDLDEVSVVQNNTNRDEALSALEVLGFVRKTSEKVVEKIVKEDPEA
HHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
TVETIIKKALKSL
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA