| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146299406
Identifier: 146299406
GI number: 146299406
Start: 1909362
End: 1910249
Strand: Direct
Name: 146299406
Synonym: Fjoh_1646
Alternate gene names: NA
Gene position: 1909362-1910249 (Clockwise)
Preceding gene: 146299405
Following gene: 146299407
Centisome position: 31.32
GC content: 36.26
Gene sequence:
>888_bases ATGTTTTTTACCATTGTGTGTTCAGCGCAGCAAGATGCTCAGTTTACACAATACATGTACAACACTATCGGAATAAATCC GGCTTATGCAGGTTCGCGCGGCGTACTGAGTGTTTTTGGGTTATATCGTACACAATGGATTGGTCTTGACGGAGCGCCGG AAACAAGTACTTTTTCTGTAAACACACCTTTAACCAACAGCAATTTAGGATTAGGAGTTTCTTTGGTAAACGATAAAATC GGGCCAACGAACGAAAATACTTTATCTGCTGATTTGTCATACAGTATTCCAACATCAGAATCATTTAAACTTTCGTTTGG TATCAAGGCAACAGCCAATCTTTTTAATCTTGATGCTAGTAAATTGAGTTATGAAGATCAAAACGACGAATTATTTCAGG ACATCAAAAATAAGTTTACACCCAATATTGGAGCCGGAATTTACTGGCATTCAGATCGTGCTTATTTAGGATTATCAGTT CCTAATTTTATCGAAACCAATCGCTATGACAATAATGATGTCGCTATTTTCAAAGAAAAAATAAACTATTACTTCATGGC AGGTTATGTATTTAATCTGGATCATTTAGAGTATATAAAATTCAAACCGGCATTGTTGACAAAAATGGTAGAAGGAGCAC CTTTGCAGGTAGATGTTTCTGGTAATTTCATGTTCAATGATAAGTTCGTTCTTGGGCTTGCTTATCGCTGGAGTGCTTCG GTAAGTGCTATGGCAGGTTTTCAGGTTACAAAAGGCATGTATATAGGATATGGTTACGATCACGAAACCACACAATTAAG AAAATACAATTCAGGATCGCATGAGATTTTCCTTCGTTTTGATTTCTTTAATAATTACAGCAAACTTACCTCACCAAGAT TCTTTTAA
Upstream 100 bases:
>100_bases CAGGTTATTTATACATTAATAAATAAAAAATACAAACGGCTTACGATAAGCTGAGCCGTTTTTTAAAATCTTTAAGATGA AAAAATTAGGTTTAATTTTT
Downstream 100 bases:
>100_bases TTGATAAATTATGAAGCTTAAAAAAATACTTTTTCCCATTTTGTTGCTTTGCTTTTTTATGGCAGATGCCCAAACGGCCA GTATAAAAAATGCAGATAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MFFTIVCSAQQDAQFTQYMYNTIGINPAYAGSRGVLSVFGLYRTQWIGLDGAPETSTFSVNTPLTNSNLGLGVSLVNDKI GPTNENTLSADLSYSIPTSESFKLSFGIKATANLFNLDASKLSYEDQNDELFQDIKNKFTPNIGAGIYWHSDRAYLGLSV PNFIETNRYDNNDVAIFKEKINYYFMAGYVFNLDHLEYIKFKPALLTKMVEGAPLQVDVSGNFMFNDKFVLGLAYRWSAS VSAMAGFQVTKGMYIGYGYDHETTQLRKYNSGSHEIFLRFDFFNNYSKLTSPRFF
Sequences:
>Translated_295_residues MFFTIVCSAQQDAQFTQYMYNTIGINPAYAGSRGVLSVFGLYRTQWIGLDGAPETSTFSVNTPLTNSNLGLGVSLVNDKI GPTNENTLSADLSYSIPTSESFKLSFGIKATANLFNLDASKLSYEDQNDELFQDIKNKFTPNIGAGIYWHSDRAYLGLSV PNFIETNRYDNNDVAIFKEKINYYFMAGYVFNLDHLEYIKFKPALLTKMVEGAPLQVDVSGNFMFNDKFVLGLAYRWSAS VSAMAGFQVTKGMYIGYGYDHETTQLRKYNSGSHEIFLRFDFFNNYSKLTSPRFF >Mature_295_residues MFFTIVCSAQQDAQFTQYMYNTIGINPAYAGSRGVLSVFGLYRTQWIGLDGAPETSTFSVNTPLTNSNLGLGVSLVNDKI GPTNENTLSADLSYSIPTSESFKLSFGIKATANLFNLDASKLSYEDQNDELFQDIKNKFTPNIGAGIYWHSDRAYLGLSV PNFIETNRYDNNDVAIFKEKINYYFMAGYVFNLDHLEYIKFKPALLTKMVEGAPLQVDVSGNFMFNDKFVLGLAYRWSAS VSAMAGFQVTKGMYIGYGYDHETTQLRKYNSGSHEIFLRFDFFNNYSKLTSPRFF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33295; Mature: 33295
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFFTIVCSAQQDAQFTQYMYNTIGINPAYAGSRGVLSVFGLYRTQWIGLDGAPETSTFSV CEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHEEEECCCCCCCCCEEEE NTPLTNSNLGLGVSLVNDKIGPTNENTLSADLSYSIPTSESFKLSFGIKATANLFNLDAS ECCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEEECCCCCCEEEEECCEEECEEEECCHH KLSYEDQNDELFQDIKNKFTPNIGAGIYWHSDRAYLGLSVPNFIETNRYDNNDVAIFKEK HCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCEEEECCCCCHHHCCCCCCCCEEEEEEC INYYFMAGYVFNLDHLEYIKFKPALLTKMVEGAPLQVDVSGNFMFNDKFVLGLAYRWSAS CCEEEEEEEEECCCCEEEEEECHHHHHHHHCCCCEEEEECCCEEECCEEEEEEEEECCCC VSAMAGFQVTKGMYIGYGYDHETTQLRKYNSGSHEIFLRFDFFNNYSKLTSPRFF CHHHCCEEEECCEEEEECCCCCCCEEEECCCCCEEEEEEEEEECCHHHCCCCCCC >Mature Secondary Structure MFFTIVCSAQQDAQFTQYMYNTIGINPAYAGSRGVLSVFGLYRTQWIGLDGAPETSTFSV CEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHEEEECCCCCCCCCEEEE NTPLTNSNLGLGVSLVNDKIGPTNENTLSADLSYSIPTSESFKLSFGIKATANLFNLDAS ECCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEEECCCCCCEEEEECCEEECEEEECCHH KLSYEDQNDELFQDIKNKFTPNIGAGIYWHSDRAYLGLSVPNFIETNRYDNNDVAIFKEK HCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCEEEECCCCCHHHCCCCCCCCEEEEEEC INYYFMAGYVFNLDHLEYIKFKPALLTKMVEGAPLQVDVSGNFMFNDKFVLGLAYRWSAS CCEEEEEEEEECCCCEEEEEECHHHHHHHHCCCCEEEEECCCEEECCEEEEEEEEECCCC VSAMAGFQVTKGMYIGYGYDHETTQLRKYNSGSHEIFLRFDFFNNYSKLTSPRFF CHHHCCEEEECCEEEEECCCCCCCEEEECCCCCEEEEEEEEEECCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA