| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is aat
Identifier: 146299355
GI number: 146299355
Start: 1845482
End: 1846120
Strand: Direct
Name: aat
Synonym: Fjoh_1595
Alternate gene names: 146299355
Gene position: 1845482-1846120 (Clockwise)
Preceding gene: 146299354
Following gene: 146299356
Centisome position: 30.27
GC content: 35.52
Gene sequence:
>639_bases ATGTATTATTTATTTAAAGATTTGTTTTTTCCGCCGGTTTCAGAAGCTGATGAAGAAGGTGTTCTGGCTATTGGAGGCGA TTTAGATCCAGAGCGGTTAAAACTGGCCTATAAAAGCGGTATTTTTCCTTGGTTTAATGAAGGTGAACCTATTCTTTGGT GGGCGCCGGATCCAAGAATGGTACTGTTTTTCGATGAATTGGTAATATCCAAAAGCATGCGAAAAATCCTCAATAAAAAA ATATTCAAGGTTACTTATAATAAAAACTTCAAAGAAGTAATTTCTAATTGCCAGCAGATAAAACGTGAAGGACAGAACGG AACATGGATTTCGAACGAAATGATCGAAGCCTATTGCGAACTTCATAAGCAAGGAATTGCAAAATCTGTTGAGGTTTGGC AGGATGAAGTTTTGGTTGGCGGTTTATACGGAATAGATTTAGGTCATGTTTTTTGCGGAGAAAGTATGTTTTCTAAAGTT TCAAATGCTTCAAAAACAGCTTTTATTGCTTTAGCATTATATTTGAAGAAAGAAAATTATAAACTGCTGGATTGCCAGGT TTATAACTCGCACTTAGAGAGTTTAGGGTGCCGAGAAATTGATCGCGAAGAGTTTATGTCTATTTTAAAAAGTAAATAG
Upstream 100 bases:
>100_bases ATTCATTTCCGTGAATTTGGGATTTGGAATTTTATTTTTGAGTTCATTTCATCAAATGACAATTTTTTAGGATTTGGAAT TTAAAAGTTGACGATTTAAA
Downstream 100 bases:
>100_bases AAATGAGTACAGTTCATATTGTAAAGGAAATTTACATTTATCCAATAAAAAGCTTGGCAGGAATAAGCTGTAAATCTGCT TTAGCTGAAGAAATGGGATT
Product: leucyl/phenylalanyl-tRNA--protein transferase
Products: NA
Alternate protein names: L/F-transferase; Leucyltransferase; Phenyalanyltransferase
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MYYLFKDLFFPPVSEADEEGVLAIGGDLDPERLKLAYKSGIFPWFNEGEPILWWAPDPRMVLFFDELVISKSMRKILNKK IFKVTYNKNFKEVISNCQQIKREGQNGTWISNEMIEAYCELHKQGIAKSVEVWQDEVLVGGLYGIDLGHVFCGESMFSKV SNASKTAFIALALYLKKENYKLLDCQVYNSHLESLGCREIDREEFMSILKSK
Sequences:
>Translated_212_residues MYYLFKDLFFPPVSEADEEGVLAIGGDLDPERLKLAYKSGIFPWFNEGEPILWWAPDPRMVLFFDELVISKSMRKILNKK IFKVTYNKNFKEVISNCQQIKREGQNGTWISNEMIEAYCELHKQGIAKSVEVWQDEVLVGGLYGIDLGHVFCGESMFSKV SNASKTAFIALALYLKKENYKLLDCQVYNSHLESLGCREIDREEFMSILKSK >Mature_212_residues MYYLFKDLFFPPVSEADEEGVLAIGGDLDPERLKLAYKSGIFPWFNEGEPILWWAPDPRMVLFFDELVISKSMRKILNKK IFKVTYNKNFKEVISNCQQIKREGQNGTWISNEMIEAYCELHKQGIAKSVEVWQDEVLVGGLYGIDLGHVFCGESMFSKV SNASKTAFIALALYLKKENYKLLDCQVYNSHLESLGCREIDREEFMSILKSK
Specific function: Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
COG id: COG2360
COG function: function code O; Leu/Phe-tRNA-protein transferase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the L/F-transferase family
Homologues:
Organism=Escherichia coli, GI1787111, Length=194, Percent_Identity=48.4536082474227, Blast_Score=203, Evalue=8e-54,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): LFTR_FLAJ1 (A5FJI6)
Other databases:
- EMBL: CP000685 - RefSeq: YP_001193946.1 - ProteinModelPortal: A5FJI6 - SMR: A5FJI6 - STRING: A5FJI6 - GeneID: 5090946 - GenomeReviews: CP000685_GR - KEGG: fjo:Fjoh_1595 - eggNOG: COG2360 - HOGENOM: HBG485363 - OMA: GEPILWW - ProtClustDB: PRK00301 - BioCyc: FJOH376686:FJOH_1595-MONOMER - GO: GO:0005737 - HAMAP: MF_00688 - InterPro: IPR016181 - InterPro: IPR004616 - TIGRFAMs: TIGR00667
Pfam domain/function: PF03588 Leu_Phe_trans; SSF55729 Acyl_CoA_acyltransferase
EC number: =2.3.2.6
Molecular weight: Translated: 24464; Mature: 24464
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYYLFKDLFFPPVSEADEEGVLAIGGDLDPERLKLAYKSGIFPWFNEGEPILWWAPDPRM CCEEHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCE VLFFDELVISKSMRKILNKKIFKVTYNKNFKEVISNCQQIKREGQNGTWISNEMIEAYCE EEHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHH LHKQGIAKSVEVWQDEVLVGGLYGIDLGHVFCGESMFSKVSNASKTAFIALALYLKKENY HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHCCCCC KLLDCQVYNSHLESLGCREIDREEFMSILKSK EEEEHHHHHHHHHHCCCCCCCHHHHHHHHHCC >Mature Secondary Structure MYYLFKDLFFPPVSEADEEGVLAIGGDLDPERLKLAYKSGIFPWFNEGEPILWWAPDPRM CCEEHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCE VLFFDELVISKSMRKILNKKIFKVTYNKNFKEVISNCQQIKREGQNGTWISNEMIEAYCE EEHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHH LHKQGIAKSVEVWQDEVLVGGLYGIDLGHVFCGESMFSKVSNASKTAFIALALYLKKENY HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHCCCCC KLLDCQVYNSHLESLGCREIDREEFMSILKSK EEEEHHHHHHHHHHCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA