| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146299300
Identifier: 146299300
GI number: 146299300
Start: 1777743
End: 1778303
Strand: Direct
Name: 146299300
Synonym: Fjoh_1540
Alternate gene names: NA
Gene position: 1777743-1778303 (Clockwise)
Preceding gene: 146299299
Following gene: 146299302
Centisome position: 29.16
GC content: 33.87
Gene sequence:
>561_bases ATGTTAAAAAAAATCCTTTCAGTAACTGCAATTTTGCTGACATTAACAGTCGTAAGCTGTAAAGACGATGTGCTGCCAAA ACCTGCAGGTTTCCTGAGATTAGATTATCCGGAAGCTAAATACGTTAATTTTGAAAATAACTGCCCCTTTGTTTTTCAGA TGAATGAAGACGCTGTTATTAAAGGCGAAAAAGACTGCGGATTTGCGATTACTTATCCAAAAATGAAAGCGACTATATAT TTAACTTACAAACCTGTAAACGGTAATATTGAAAAGCTGTTAAAAGATGCGCAAAAGCTTACTTATGAGCACGTTATTAA AGCCGATGATATTTTAGAACAGCCTTATATAAATCCTGAAAAAAAGGTTTACGGAATGTTTTATCAGGTTGATGGTAATG CAGCGACAAACTCTCAGTTTTATGTTACAGACAGTACAAAACATTTTATAGCAGGATCGGTTTATTTTTATGCAAAACCT AATTTTGATTCGATTATGCCGGCAGCGAGTTATATCAAAAATGACATGCAGCGTATAATGGAAACTTTAAAGTGGAAATA A
Upstream 100 bases:
>100_bases TCCTAAAAAAGATCAAAAAATAGCTTTTGAGAATTGTGTTTTTACAATAGAAACCGTTGACAAAAAGCGTGTAAAACAAA TAAAAGTAACAATAGAATAA
Downstream 100 bases:
>100_bases AAAATAATTAAGAAATAAAAAACGGCGTTCAATTGAACGCCGTTTTTGTTTGGGTAAAGTTTAAACTTAAGATTTAAAGT CTGAAACTTTGTATGTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: Gliding Motility-Associated Lipoprotein GldD; Protein Involved In Gliding Motility Gldd; Protein Involved In Gliding Motility GldD; Gliding Motility-Related Protein; Gliding Motility-Associated Lipoprotein Gldd
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MLKKILSVTAILLTLTVVSCKDDVLPKPAGFLRLDYPEAKYVNFENNCPFVFQMNEDAVIKGEKDCGFAITYPKMKATIY LTYKPVNGNIEKLLKDAQKLTYEHVIKADDILEQPYINPEKKVYGMFYQVDGNAATNSQFYVTDSTKHFIAGSVYFYAKP NFDSIMPAASYIKNDMQRIMETLKWK
Sequences:
>Translated_186_residues MLKKILSVTAILLTLTVVSCKDDVLPKPAGFLRLDYPEAKYVNFENNCPFVFQMNEDAVIKGEKDCGFAITYPKMKATIY LTYKPVNGNIEKLLKDAQKLTYEHVIKADDILEQPYINPEKKVYGMFYQVDGNAATNSQFYVTDSTKHFIAGSVYFYAKP NFDSIMPAASYIKNDMQRIMETLKWK >Mature_186_residues MLKKILSVTAILLTLTVVSCKDDVLPKPAGFLRLDYPEAKYVNFENNCPFVFQMNEDAVIKGEKDCGFAITYPKMKATIY LTYKPVNGNIEKLLKDAQKLTYEHVIKADDILEQPYINPEKKVYGMFYQVDGNAATNSQFYVTDSTKHFIAGSVYFYAKP NFDSIMPAASYIKNDMQRIMETLKWK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21302; Mature: 21302
Theoretical pI: Translated: 8.39; Mature: 8.39
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKKILSVTAILLTLTVVSCKDDVLPKPAGFLRLDYPEAKYVNFENNCPFVFQMNEDAVI CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEEEECCCCCEEEEECCCEEE KGEKDCGFAITYPKMKATIYLTYKPVNGNIEKLLKDAQKLTYEHVIKADDILEQPYINPE ECCCCCCEEEECCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCC KKVYGMFYQVDGNAATNSQFYVTDSTKHFIAGSVYFYAKPNFDSIMPAASYIKNDMQRIM CEEEEEEEEECCCCCCCCEEEEECCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHH ETLKWK HHHCCC >Mature Secondary Structure MLKKILSVTAILLTLTVVSCKDDVLPKPAGFLRLDYPEAKYVNFENNCPFVFQMNEDAVI CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEEEECCCCCEEEEECCCEEE KGEKDCGFAITYPKMKATIYLTYKPVNGNIEKLLKDAQKLTYEHVIKADDILEQPYINPE ECCCCCCEEEECCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCC KKVYGMFYQVDGNAATNSQFYVTDSTKHFIAGSVYFYAKPNFDSIMPAASYIKNDMQRIM CEEEEEEEEECCCCCCCCEEEEECCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHH ETLKWK HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA