| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is cysH [H]
Identifier: 146299261
GI number: 146299261
Start: 1728362
End: 1729072
Strand: Direct
Name: cysH [H]
Synonym: Fjoh_1501
Alternate gene names: 146299261
Gene position: 1728362-1729072 (Clockwise)
Preceding gene: 146299260
Following gene: 146299262
Centisome position: 28.35
GC content: 35.3
Gene sequence:
>711_bases ATGAGTGCGATTATTGTACAAGAATTATTAGAGAAAACGAAAGATTTCTCACTTGACGAAACCTTAGTTTTTTTAGCAGA AGAATTTCCGGGAAAAGTAATTTTTTCGACTTCTTTTGGGCAGGAAGATCAGGTAATTACTGATTTTATTGCAAAAAGTA ACACAGATATTACTGTTTTTACTTTAGACACAGGAAGATTATTTCAGGAAACGTATGACGTTTTTCACAAAACATTAAAA AAGTATAAAAGACCAATTGAGGTTTATTTTCCAGAAGCGGCGGCTGTAGAAAATTTACTAAAATCAAAAGGACCAAACAG CTTTTACGATTCAGTTGAAAACAGAAAAGAATGCTGTTTTATTCGAAAAGTGGTTCCGTTGAGAAAAGCTTTATCAGGAA ACGCAGTTTGGATTACTGGTTTAAGAGCAGAACAATCAGAAAACAGACAAGATCTAAACTTGTTTGAATACGACGGAAAC TTCGAAATCATCAAATTTAATCCGTTATTAAAATGGACTTTAGAAGAAGTTGAAACGTATTTGTCAGAAAATAATGTTCC TCAAAACGCTTTACACAAACAAGGTTTCGTAAGTATTGGATGTGCGCCTTGTACGAGAGCGATTTTCCCTGGAGAAGATA TCAGAGCCGGAAGATGGTGGTGGGAGTCAAGCCATAAAGAGTGCGGGCTTCACAGTGCGAAAAAAGAGTAA
Upstream 100 bases:
>100_bases AGAAAACCAATGATGGTTGCTGTTGGAGTTCTAATTATATTATTGAGTTTAAAAACATTATCTAAATTATTATAATTCTT TAGATAGGGAGAAAGAGATT
Downstream 100 bases:
>100_bases GTAGAAGAAAGAAGCAATAGCAAAGAAAATAGATTTAAAGTTCCGAAGGAACGATTCATATTGTAGCGCCGGATTTTAAT CCGGGGGGAGAGGTGATAAA
Product: adenylylsulfate reductase, thioredoxin dependent
Products: NA
Alternate protein names: 3'-phosphoadenylylsulfate reductase; PAPS reductase, thioredoxin dependent; PAPS sulfotransferase; PAdoPS reductase [H]
Number of amino acids: Translated: 236; Mature: 235
Protein sequence:
>236_residues MSAIIVQELLEKTKDFSLDETLVFLAEEFPGKVIFSTSFGQEDQVITDFIAKSNTDITVFTLDTGRLFQETYDVFHKTLK KYKRPIEVYFPEAAAVENLLKSKGPNSFYDSVENRKECCFIRKVVPLRKALSGNAVWITGLRAEQSENRQDLNLFEYDGN FEIIKFNPLLKWTLEEVETYLSENNVPQNALHKQGFVSIGCAPCTRAIFPGEDIRAGRWWWESSHKECGLHSAKKE
Sequences:
>Translated_236_residues MSAIIVQELLEKTKDFSLDETLVFLAEEFPGKVIFSTSFGQEDQVITDFIAKSNTDITVFTLDTGRLFQETYDVFHKTLK KYKRPIEVYFPEAAAVENLLKSKGPNSFYDSVENRKECCFIRKVVPLRKALSGNAVWITGLRAEQSENRQDLNLFEYDGN FEIIKFNPLLKWTLEEVETYLSENNVPQNALHKQGFVSIGCAPCTRAIFPGEDIRAGRWWWESSHKECGLHSAKKE >Mature_235_residues SAIIVQELLEKTKDFSLDETLVFLAEEFPGKVIFSTSFGQEDQVITDFIAKSNTDITVFTLDTGRLFQETYDVFHKTLKK YKRPIEVYFPEAAAVENLLKSKGPNSFYDSVENRKECCFIRKVVPLRKALSGNAVWITGLRAEQSENRQDLNLFEYDGNF EIIKFNPLLKWTLEEVETYLSENNVPQNALHKQGFVSIGCAPCTRAIFPGEDIRAGRWWWESSHKECGLHSAKKE
Specific function: Reduction of activated sulfate into sulfite [H]
COG id: COG0175
COG function: function code EH; 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PAPS reductase family. CysH subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789121, Length=211, Percent_Identity=29.3838862559242, Blast_Score=84, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6325425, Length=210, Percent_Identity=33.3333333333333, Blast_Score=99, Evalue=8e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011798 - InterPro: IPR004511 - InterPro: IPR002500 - InterPro: IPR014729 [H]
Pfam domain/function: PF01507 PAPS_reduct [H]
EC number: =1.8.4.8 [H]
Molecular weight: Translated: 27105; Mature: 26974
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAIIVQELLEKTKDFSLDETLVFLAEEFPGKVIFSTSFGQEDQVITDFIAKSNTDITVF CCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCCCEEEE TLDTGRLFQETYDVFHKTLKKYKRPIEVYFPEAAAVENLLKSKGPNSFYDSVENRKECCF EECCCHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHH IRKVVPLRKALSGNAVWITGLRAEQSENRQDLNLFEYDGNFEIIKFNPLLKWTLEEVETY HHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCEEEEECCCEEEEEECCHHHHHHHHHHHH LSENNVPQNALHKQGFVSIGCAPCTRAIFPGEDIRAGRWWWESSHKECGLHSAKKE HHCCCCCHHHHHHCCCEEECCHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCC >Mature Secondary Structure SAIIVQELLEKTKDFSLDETLVFLAEEFPGKVIFSTSFGQEDQVITDFIAKSNTDITVF CHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCCCEEEE TLDTGRLFQETYDVFHKTLKKYKRPIEVYFPEAAAVENLLKSKGPNSFYDSVENRKECCF EECCCHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHH IRKVVPLRKALSGNAVWITGLRAEQSENRQDLNLFEYDGNFEIIKFNPLLKWTLEEVETY HHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCEEEEECCCEEEEEECCHHHHHHHHHHHH LSENNVPQNALHKQGFVSIGCAPCTRAIFPGEDIRAGRWWWESSHKECGLHSAKKE HHCCCCCHHHHHHCCCEEECCHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194 [H]