| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is thrA [H]
Identifier: 146299252
GI number: 146299252
Start: 1717595
End: 1718728
Strand: Direct
Name: thrA [H]
Synonym: Fjoh_1492
Alternate gene names: 146299252
Gene position: 1717595-1718728 (Clockwise)
Preceding gene: 146299251
Following gene: 146299253
Centisome position: 28.17
GC content: 32.36
Gene sequence:
>1134_bases ATGAAAAGAAAATCATCATACAGATATATTTTAAAAATTAAAATTATGTCAAAGCTTAAAATAAATATCATCCTATTTGG AATAGGAAATATAGGAAGCACATTAATCAATCAGATTATCGAAAGTCAGGAGTTTTTTCTGCAAAGCAAAAATGTTGATT TTCATTTTCCTATCATCACCAATTCTACAGTAGCCTTTTTCGAGAAAGAAGGTGTTGGATATGCCTGGGAAACCAATTTT AGAGAATTGGCTGTTCCGTTTAGAGTCGAAGATATTATTGAATTTGCAAAAGAAAACGAATTCGAAAATCTTATTGCCGT TGATGCCACTGCCAGCGACGAATTGATTGGTCATTATAATACTTTAATCGAAAACGGATTCAATATCGTGGCTGTAAACA AAAAAGCCAATACGCTCCCAATTGATCTCTATAAAAAAATTAGGGAAAATCTAAAAAAATACGACAAAGAGTTCTTGTAT GAAACCTCCGTAGATACAGGATTTCCGGTTTTGCAGACATTAAGAGATTTGTATTATTCAGGAGAAAAAATAACCAAAAT ACGAGGTGTGTTTTCAGATAACCTGAGTTATGTATTTAATCGTTTTTCGGCCGAAGAAAACTCTTTTTCCTCTATTTTAA AAGATGCCAGCCTTCTCGGATTAATGCGTTCTACATTTAAAGAAGATCTGTCTGGAAATGATACAGCCAGAAAATTATTG ATCCTGACGAGGGAAATAGGAAAAGAATTCGAATTTTCAGATATCAAAATTCATCCTCTGATAAGAGAAGAACATTTAGA AAAAAATGGAATACTGAATAAAGATGCTATTGATAAATCATTTAAAATTGCCAAAATAACCCAAAAAGACAATCACGTCT TACGATATATAGGAGAATTTGATGTTGAAAAAAATACTCTCGAAGTAAAATTAGTCTCAGAACCTGTAACATCAGCAATT GGCCAGTTAAAAGGTTCAGACTCTATTTTCGAAATTTACACACAATCTTATGCTAATACTCCAATTGTGCTTCAAAGCGC ATCACCGTGCAAACAGGCAATTTCGAGAGGTTTAATAACCGATATTCTAAAAGTTGCAGAAAAAATAAAAAATAAAGAAG CAGTCTGGCTTTAG
Upstream 100 bases:
>100_bases TAACCCAATCGCAGTACAGCATCAATAAGAATTAGGTTTTTTTGTTTTTTGTTTGAAAAATTGCCTTTAGCAGCGTGAGT TCTGCTAGAGGTGATTTTTT
Downstream 100 bases:
>100_bases TGGTTTTTCAATATTAGATAGTTCTTTGACAGATTGAAACAGAAAGTTAGATATTTTTTGTAAGATTTAACCTTCTTTAA TTCAAAATGTAATTTTGTAA
Product: homoserine dehydrogenase
Products: NA
Alternate protein names: AK-HD; Aspartokinase; Homoserine dehydrogenase [H]
Number of amino acids: Translated: 377; Mature: 377
Protein sequence:
>377_residues MKRKSSYRYILKIKIMSKLKINIILFGIGNIGSTLINQIIESQEFFLQSKNVDFHFPIITNSTVAFFEKEGVGYAWETNF RELAVPFRVEDIIEFAKENEFENLIAVDATASDELIGHYNTLIENGFNIVAVNKKANTLPIDLYKKIRENLKKYDKEFLY ETSVDTGFPVLQTLRDLYYSGEKITKIRGVFSDNLSYVFNRFSAEENSFSSILKDASLLGLMRSTFKEDLSGNDTARKLL ILTREIGKEFEFSDIKIHPLIREEHLEKNGILNKDAIDKSFKIAKITQKDNHVLRYIGEFDVEKNTLEVKLVSEPVTSAI GQLKGSDSIFEIYTQSYANTPIVLQSASPCKQAISRGLITDILKVAEKIKNKEAVWL
Sequences:
>Translated_377_residues MKRKSSYRYILKIKIMSKLKINIILFGIGNIGSTLINQIIESQEFFLQSKNVDFHFPIITNSTVAFFEKEGVGYAWETNF RELAVPFRVEDIIEFAKENEFENLIAVDATASDELIGHYNTLIENGFNIVAVNKKANTLPIDLYKKIRENLKKYDKEFLY ETSVDTGFPVLQTLRDLYYSGEKITKIRGVFSDNLSYVFNRFSAEENSFSSILKDASLLGLMRSTFKEDLSGNDTARKLL ILTREIGKEFEFSDIKIHPLIREEHLEKNGILNKDAIDKSFKIAKITQKDNHVLRYIGEFDVEKNTLEVKLVSEPVTSAI GQLKGSDSIFEIYTQSYANTPIVLQSASPCKQAISRGLITDILKVAEKIKNKEAVWL >Mature_377_residues MKRKSSYRYILKIKIMSKLKINIILFGIGNIGSTLINQIIESQEFFLQSKNVDFHFPIITNSTVAFFEKEGVGYAWETNF RELAVPFRVEDIIEFAKENEFENLIAVDATASDELIGHYNTLIENGFNIVAVNKKANTLPIDLYKKIRENLKKYDKEFLY ETSVDTGFPVLQTLRDLYYSGEKITKIRGVFSDNLSYVFNRFSAEENSFSSILKDASLLGLMRSTFKEDLSGNDTARKLL ILTREIGKEFEFSDIKIHPLIREEHLEKNGILNKDAIDKSFKIAKITQKDNHVLRYIGEFDVEKNTLEVKLVSEPVTSAI GQLKGSDSIFEIYTQSYANTPIVLQSASPCKQAISRGLITDILKVAEKIKNKEAVWL
Specific function: Catalyzes 2 nonconsecutive reactions in the common biosynthetic pathway leading from Asp to diaminopimelate and Lys, to Met, and to Thr and Ile. [C]
COG id: COG0460
COG function: function code E; Homoserine dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ACT domains [H]
Homologues:
Organism=Escherichia coli, GI1786183, Length=332, Percent_Identity=30.421686746988, Blast_Score=170, Evalue=2e-43, Organism=Escherichia coli, GI1790376, Length=357, Percent_Identity=27.4509803921569, Blast_Score=145, Evalue=5e-36, Organism=Saccharomyces cerevisiae, GI6322599, Length=373, Percent_Identity=28.9544235924933, Blast_Score=140, Evalue=5e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001048 - InterPro: IPR005106 - InterPro: IPR001341 - InterPro: IPR018042 - InterPro: IPR011147 - InterPro: IPR001342 - InterPro: IPR019811 - InterPro: IPR016040 [H]
Pfam domain/function: PF00696 AA_kinase; PF00742 Homoserine_dh; PF03447 NAD_binding_3 [H]
EC number: =2.7.2.4; =1.1.1.3 [H]
Molecular weight: Translated: 43077; Mature: 43077
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRKSSYRYILKIKIMSKLKINIILFGIGNIGSTLINQIIESQEFFLQSKNVDFHFPIIT CCCCCCCEEEEEEEEECEEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEE NSTVAFFEKEGVGYAWETNFRELAVPFRVEDIIEFAKENEFENLIAVDATASDELIGHYN CCEEEEEECCCCCEEEECCHHHEECCCCHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHH TLIENGFNIVAVNKKANTLPIDLYKKIRENLKKYDKEFLYETSVDTGFPVLQTLRDLYYS HHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHC GEKITKIRGVFSDNLSYVFNRFSAEENSFSSILKDASLLGLMRSTFKEDLSGNDTARKLL CCHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH ILTREIGKEFEFSDIKIHPLIREEHLEKNGILNKDAIDKSFKIAKITQKDNHVLRYIGEF HHHHHHCCCCCCCCEEEEECHHHHHHHHCCCCCCHHCCCCEEEEEECCCCCHHHHHHHHC DVEKNTLEVKLVSEPVTSAIGQLKGSDSIFEIYTQSYANTPIVLQSASPCKQAISRGLIT CCCCCEEEEEEECCHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHH DILKVAEKIKNKEAVWL HHHHHHHHHCCCCCCCC >Mature Secondary Structure MKRKSSYRYILKIKIMSKLKINIILFGIGNIGSTLINQIIESQEFFLQSKNVDFHFPIIT CCCCCCCEEEEEEEEECEEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEE NSTVAFFEKEGVGYAWETNFRELAVPFRVEDIIEFAKENEFENLIAVDATASDELIGHYN CCEEEEEECCCCCEEEECCHHHEECCCCHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHH TLIENGFNIVAVNKKANTLPIDLYKKIRENLKKYDKEFLYETSVDTGFPVLQTLRDLYYS HHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHC GEKITKIRGVFSDNLSYVFNRFSAEENSFSSILKDASLLGLMRSTFKEDLSGNDTARKLL CCHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH ILTREIGKEFEFSDIKIHPLIREEHLEKNGILNKDAIDKSFKIAKITQKDNHVLRYIGEF HHHHHHCCCCCCCCEEEEECHHHHHHHHCCCCCCHHCCCCEEEEEECCCCCHHHHHHHHC DVEKNTLEVKLVSEPVTSAIGQLKGSDSIFEIYTQSYANTPIVLQSASPCKQAISRGLIT CCCCCEEEEEEECCHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHH DILKVAEKIKNKEAVWL HHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10993077 [H]