Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146299247

Identifier: 146299247

GI number: 146299247

Start: 1706690

End: 1708948

Strand: Direct

Name: 146299247

Synonym: Fjoh_1487

Alternate gene names: NA

Gene position: 1706690-1708948 (Clockwise)

Preceding gene: 146299246

Following gene: 146299250

Centisome position: 27.99

GC content: 31.03

Gene sequence:

>2259_bases
ATGCGCAATATTGTTTGGAGTTTATCACTCTTGTTTGCCGGAATGTTTGTTTCTTTCGCTCAAACAAATGGTATTCAAAA
AGGAACTTATTTATCTACAAATAAAGGTGGAAAAATAAAACTAAATTTATTAGACGATAACAAATACGAACTGGTCTTTT
ATACGGGAGAATATGAAATTAAAGGCGATTCGTTAGTTTTTTCTAAAAATGCACAATCAGAAAACGGGTTTAATCTTTCG
TTTAAAAATGATAAAAAAGCCAAAAAGATTAAGATTAAAATCTTAGACCCAACTCTTTATTCAGTTTATATAGGACCTAA
CTTTTATATAGGTACTCAAAAAGCTTCAGAAACAGTTCAGTATCAAAGAATTTCTGATATTAGAGCAAAAGTAGATCCAA
ACTGGACATCAACAGATTTAGAATTTGAAATAGACAAAACAGATTTTTTGTATTTGGTTATAGAAAATCATGACGGAAAA
AGTAATATTAGTAAATATGCACTGGACAAAGATGTTTCAGAAGCAGCAATTGATTATCAGTCACAGCCTTTAGGTAATCT
CAATTTTGCCGGGTTTTATGACAGAAAAACAAACCAGCTGAAAGTTTCTGAACCATTAGTAAACGAGCCTTTCGTATTTG
TAAACGAAAAAGATGTACAGCCGGATAAAACGCCTAAAGTTGTTCCTTTAGAAAATCAAACTATAACAAACTGGACTTAT
CCGGGAAAAAGCCCTTATTATGACTATTATGGAACTGCTGTAGACAGTACTCAAAATAATGCAATTGATAGTGTTGCTGT
TGACACAACTGCATACGCTTCAACAGATTATTCATATAATTTTAAACTTAAAATAGAAAATAATCTAAAAAGTGCTCTTG
CTGCAACTAAAGATGCTAAAACTAAGTTTTTAGTTGGAATTGTAGACAGCAAAAATCCCTCTGCAAAAGCAAATTTTGAT
GCATTCATAAAAAGTCAGGAATCACAGACAGGATACAACATGTATGATAAATATGATGCAAAATATGATGTTTATAATTA
TTACATGGCCGGTGCCGATGATAAAAAATGGCTGAAAAACAATAAAATAACAAACGACCCAAGTATATTCATTTTAAACG
GAAACGGTGATCTATTAGCTGTTGCAAAATCTGATTTAATATCAAACCAATATCAGTTTAGTTATAATGGCAGCTATTAT
CTTAAACTATTGCGTGCAGATGCTTCTATGTCTATTGGTAAAGTCCTGAAAAATAAAAAAGCATCTGATGCTGATTTGAT
TCAGGCTTTTAATAAAACGGCAGCACTGCAAACATCTTATGATGATGATTATACTGCATATGATTCTGCTGATCTGGTAA
TTTCTAAACCAGCCTTAGATAAAAAAGAAGTGGCTCAAACCTGGAAAAAATTAATTGAGGCACATCAAAAAGATAAAAAT
CCAGATATGAGTTTGGCAGAAACCATTATAAAAGAAATTAAGAATGTTGGATTTACCAAACAGCTTTTTAACGAAGACAG
AATTTTAGACGATACAGACTTCTTAGCAATTGATTATTTGTTAAAACATTCTGATGAAATAGAAAGTAATCGTGCAGCAT
TCAATAATGATGCACCGGAAGTTCATTATATAGACAATGTTTTTTCTGAAATTTCCAATGCATTGCAGGGTAATCTAAAT
GTTTCTAAAGATGGAGCAGGAGGAGAAAAAAACAAAGACAAAGTCAATTCGATTTATAAAAAAATCATTGCATCTGGAAA
AGGAAATTTTGAATCCTATAGAAACTATTTTGACTATTTAGGTCAGTTTACAGACAATGACGGTTCTAATACAACCTACT
TAAAAGAGTTTAATACTTATTTTGATAATACATTAGCAGGGGCAAATCCAATTGAAAAATTAGATGTTATTTTTTCAGGA
TTAGACCCGAACTCTAGTTATTCTTATGACGGATGGAACTCATTTAAACTTTACAATTCAGATATTTGCAATAATGCAGC
CTGGATGGTTGTATTAAAATCTCAGAATTCTAACTTTATTAAAGATGCTATAAAATGGTCTGAATATAGTTTAGTAATAT
CTAAAAACAATCCATATTATTTAGATACGCTGGCACAGTTGTATTACAAAGACGGACAAAAAGATAAAGCCATTGCAACT
GAGACTCTGGCAGTACAATATTTAACCGATAGTGTTGAAGAACAAACTGCAAATGATATAAAAGAAGTTTTATCTAAAAT
GCAGAATGGAACCTATTAA

Upstream 100 bases:

>100_bases
ATTTTTTATTGTAGTATTTTAACTACAATATTATGATTTTTTTGGCTTTGTTTGAGAGTGAATCAGATAATTTTGTACTA
TTATTAAATACAAAATAGTC

Downstream 100 bases:

>100_bases
TATCAAGATATCAGAATAAAAAGAAACCCGGCAAATTTTAGTTTTGCCGGGTTTTCTTTTACTATTTTTTAATGCCTGCC
ATTACTTTGATTTGATAATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 752; Mature: 752

Protein sequence:

>752_residues
MRNIVWSLSLLFAGMFVSFAQTNGIQKGTYLSTNKGGKIKLNLLDDNKYELVFYTGEYEIKGDSLVFSKNAQSENGFNLS
FKNDKKAKKIKIKILDPTLYSVYIGPNFYIGTQKASETVQYQRISDIRAKVDPNWTSTDLEFEIDKTDFLYLVIENHDGK
SNISKYALDKDVSEAAIDYQSQPLGNLNFAGFYDRKTNQLKVSEPLVNEPFVFVNEKDVQPDKTPKVVPLENQTITNWTY
PGKSPYYDYYGTAVDSTQNNAIDSVAVDTTAYASTDYSYNFKLKIENNLKSALAATKDAKTKFLVGIVDSKNPSAKANFD
AFIKSQESQTGYNMYDKYDAKYDVYNYYMAGADDKKWLKNNKITNDPSIFILNGNGDLLAVAKSDLISNQYQFSYNGSYY
LKLLRADASMSIGKVLKNKKASDADLIQAFNKTAALQTSYDDDYTAYDSADLVISKPALDKKEVAQTWKKLIEAHQKDKN
PDMSLAETIIKEIKNVGFTKQLFNEDRILDDTDFLAIDYLLKHSDEIESNRAAFNNDAPEVHYIDNVFSEISNALQGNLN
VSKDGAGGEKNKDKVNSIYKKIIASGKGNFESYRNYFDYLGQFTDNDGSNTTYLKEFNTYFDNTLAGANPIEKLDVIFSG
LDPNSSYSYDGWNSFKLYNSDICNNAAWMVVLKSQNSNFIKDAIKWSEYSLVISKNNPYYLDTLAQLYYKDGQKDKAIAT
ETLAVQYLTDSVEEQTANDIKEVLSKMQNGTY

Sequences:

>Translated_752_residues
MRNIVWSLSLLFAGMFVSFAQTNGIQKGTYLSTNKGGKIKLNLLDDNKYELVFYTGEYEIKGDSLVFSKNAQSENGFNLS
FKNDKKAKKIKIKILDPTLYSVYIGPNFYIGTQKASETVQYQRISDIRAKVDPNWTSTDLEFEIDKTDFLYLVIENHDGK
SNISKYALDKDVSEAAIDYQSQPLGNLNFAGFYDRKTNQLKVSEPLVNEPFVFVNEKDVQPDKTPKVVPLENQTITNWTY
PGKSPYYDYYGTAVDSTQNNAIDSVAVDTTAYASTDYSYNFKLKIENNLKSALAATKDAKTKFLVGIVDSKNPSAKANFD
AFIKSQESQTGYNMYDKYDAKYDVYNYYMAGADDKKWLKNNKITNDPSIFILNGNGDLLAVAKSDLISNQYQFSYNGSYY
LKLLRADASMSIGKVLKNKKASDADLIQAFNKTAALQTSYDDDYTAYDSADLVISKPALDKKEVAQTWKKLIEAHQKDKN
PDMSLAETIIKEIKNVGFTKQLFNEDRILDDTDFLAIDYLLKHSDEIESNRAAFNNDAPEVHYIDNVFSEISNALQGNLN
VSKDGAGGEKNKDKVNSIYKKIIASGKGNFESYRNYFDYLGQFTDNDGSNTTYLKEFNTYFDNTLAGANPIEKLDVIFSG
LDPNSSYSYDGWNSFKLYNSDICNNAAWMVVLKSQNSNFIKDAIKWSEYSLVISKNNPYYLDTLAQLYYKDGQKDKAIAT
ETLAVQYLTDSVEEQTANDIKEVLSKMQNGTY
>Mature_752_residues
MRNIVWSLSLLFAGMFVSFAQTNGIQKGTYLSTNKGGKIKLNLLDDNKYELVFYTGEYEIKGDSLVFSKNAQSENGFNLS
FKNDKKAKKIKIKILDPTLYSVYIGPNFYIGTQKASETVQYQRISDIRAKVDPNWTSTDLEFEIDKTDFLYLVIENHDGK
SNISKYALDKDVSEAAIDYQSQPLGNLNFAGFYDRKTNQLKVSEPLVNEPFVFVNEKDVQPDKTPKVVPLENQTITNWTY
PGKSPYYDYYGTAVDSTQNNAIDSVAVDTTAYASTDYSYNFKLKIENNLKSALAATKDAKTKFLVGIVDSKNPSAKANFD
AFIKSQESQTGYNMYDKYDAKYDVYNYYMAGADDKKWLKNNKITNDPSIFILNGNGDLLAVAKSDLISNQYQFSYNGSYY
LKLLRADASMSIGKVLKNKKASDADLIQAFNKTAALQTSYDDDYTAYDSADLVISKPALDKKEVAQTWKKLIEAHQKDKN
PDMSLAETIIKEIKNVGFTKQLFNEDRILDDTDFLAIDYLLKHSDEIESNRAAFNNDAPEVHYIDNVFSEISNALQGNLN
VSKDGAGGEKNKDKVNSIYKKIIASGKGNFESYRNYFDYLGQFTDNDGSNTTYLKEFNTYFDNTLAGANPIEKLDVIFSG
LDPNSSYSYDGWNSFKLYNSDICNNAAWMVVLKSQNSNFIKDAIKWSEYSLVISKNNPYYLDTLAQLYYKDGQKDKAIAT
ETLAVQYLTDSVEEQTANDIKEVLSKMQNGTY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 85004; Mature: 85004

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNIVWSLSLLFAGMFVSFAQTNGIQKGTYLSTNKGGKIKLNLLDDNKYELVFYTGEYEI
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEEECCCCEEEEEEECEEEE
KGDSLVFSKNAQSENGFNLSFKNDKKAKKIKIKILDPTLYSVYIGPNFYIGTQKASETVQ
CCCEEEEECCCCCCCCCEEEECCCCCCEEEEEEEECCEEEEEEECCEEEEECCCHHHHHH
YQRISDIRAKVDPNWTSTDLEFEIDKTDFLYLVIENHDGKSNISKYALDKDVSEAAIDYQ
HHHHHHHHHCCCCCCCCCCEEEEECCCEEEEEEEECCCCHHHHHHHHHCCCHHHHHHCCC
SQPLGNLNFAGFYDRKTNQLKVSEPLVNEPFVFVNEKDVQPDKTPKVVPLENQTITNWTY
CCCCCCCCCCEEECCCCCEEEECCCCCCCCEEEEECCCCCCCCCCCEEECCCCEEEEEEC
PGKSPYYDYYGTAVDSTQNNAIDSVAVDTTAYASTDYSYNFKLKIENNLKSALAATKDAK
CCCCCCCCCCCCEECCCCCCCCCEEEECCEEEECCCCEEEEEEEECCCHHHHHHHCCCCC
TKFLVGIVDSKNPSAKANFDAFIKSQESQTGYNMYDKYDAKYDVYNYYMAGADDKKWLKN
CEEEEEEEECCCCCCCCCHHHHHCCCCCCCCCCCHHCCCCCEEEEEEEEECCCCHHHHHC
NKITNDPSIFILNGNGDLLAVAKSDLISNQYQFSYNGSYYLKLLRADASMSIGKVLKNKK
CCCCCCCEEEEEECCCCEEEEECHHHHCCCEEEEECCEEEEEEEECCCCHHHHHHHHCCC
ASDADLIQAFNKTAALQTSYDDDYTAYDSADLVISKPALDKKEVAQTWKKLIEAHQKDKN
CCCHHHHHHHHHHHEEEECCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCC
PDMSLAETIIKEIKNVGFTKQLFNEDRILDDTDFLAIDYLLKHSDEIESNRAAFNNDAPE
CCHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCHHHHHHHHHCCCHHCCCCCCCCCCCCC
VHYIDNVFSEISNALQGNLNVSKDGAGGEKNKDKVNSIYKKIIASGKGNFESYRNYFDYL
EEHHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
GQFTDNDGSNTTYLKEFNTYFDNTLAGANPIEKLDVIFSGLDPNSSYSYDGWNSFKLYNS
CCCCCCCCCCCEEEHHHHHHHCCCCCCCCCHHHHHHHEECCCCCCCCCCCCCCEEEEECC
DICNNAAWMVVLKSQNSNFIKDAIKWSEYSLVISKNNPYYLDTLAQLYYKDGQKDKAIAT
CCCCCCEEEEEEECCCCCHHHHHHCCCEEEEEEECCCCEEHHHHHHHHHCCCCCCCHHHH
ETLAVQYLTDSVEEQTANDIKEVLSKMQNGTY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRNIVWSLSLLFAGMFVSFAQTNGIQKGTYLSTNKGGKIKLNLLDDNKYELVFYTGEYEI
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEEECCCCEEEEEEECEEEE
KGDSLVFSKNAQSENGFNLSFKNDKKAKKIKIKILDPTLYSVYIGPNFYIGTQKASETVQ
CCCEEEEECCCCCCCCCEEEECCCCCCEEEEEEEECCEEEEEEECCEEEEECCCHHHHHH
YQRISDIRAKVDPNWTSTDLEFEIDKTDFLYLVIENHDGKSNISKYALDKDVSEAAIDYQ
HHHHHHHHHCCCCCCCCCCEEEEECCCEEEEEEEECCCCHHHHHHHHHCCCHHHHHHCCC
SQPLGNLNFAGFYDRKTNQLKVSEPLVNEPFVFVNEKDVQPDKTPKVVPLENQTITNWTY
CCCCCCCCCCEEECCCCCEEEECCCCCCCCEEEEECCCCCCCCCCCEEECCCCEEEEEEC
PGKSPYYDYYGTAVDSTQNNAIDSVAVDTTAYASTDYSYNFKLKIENNLKSALAATKDAK
CCCCCCCCCCCCEECCCCCCCCCEEEECCEEEECCCCEEEEEEEECCCHHHHHHHCCCCC
TKFLVGIVDSKNPSAKANFDAFIKSQESQTGYNMYDKYDAKYDVYNYYMAGADDKKWLKN
CEEEEEEEECCCCCCCCCHHHHHCCCCCCCCCCCHHCCCCCEEEEEEEEECCCCHHHHHC
NKITNDPSIFILNGNGDLLAVAKSDLISNQYQFSYNGSYYLKLLRADASMSIGKVLKNKK
CCCCCCCEEEEEECCCCEEEEECHHHHCCCEEEEECCEEEEEEEECCCCHHHHHHHHCCC
ASDADLIQAFNKTAALQTSYDDDYTAYDSADLVISKPALDKKEVAQTWKKLIEAHQKDKN
CCCHHHHHHHHHHHEEEECCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCC
PDMSLAETIIKEIKNVGFTKQLFNEDRILDDTDFLAIDYLLKHSDEIESNRAAFNNDAPE
CCHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCHHHHHHHHHCCCHHCCCCCCCCCCCCC
VHYIDNVFSEISNALQGNLNVSKDGAGGEKNKDKVNSIYKKIIASGKGNFESYRNYFDYL
EEHHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
GQFTDNDGSNTTYLKEFNTYFDNTLAGANPIEKLDVIFSGLDPNSSYSYDGWNSFKLYNS
CCCCCCCCCCCEEEHHHHHHHCCCCCCCCCHHHHHHHEECCCCCCCCCCCCCCEEEEECC
DICNNAAWMVVLKSQNSNFIKDAIKWSEYSLVISKNNPYYLDTLAQLYYKDGQKDKAIAT
CCCCCCEEEEEEECCCCCHHHHHHCCCEEEEEEECCCCEEHHHHHHHHHCCCCCCCHHHH
ETLAVQYLTDSVEEQTANDIKEVLSKMQNGTY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA