Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146299173

Identifier: 146299173

GI number: 146299173

Start: 1619448

End: 1620005

Strand: Direct

Name: 146299173

Synonym: Fjoh_1413

Alternate gene names: NA

Gene position: 1619448-1620005 (Clockwise)

Preceding gene: 146299172

Following gene: 146299174

Centisome position: 26.56

GC content: 31.0

Gene sequence:

>558_bases
ATGAATTTACCAAAGAGATATATTACAAGCGTTGTCACAGTTATTGCTGTGACACTGTTTTTTGGATGCGAAAGTAATTT
TAAAGAAGTTCAAAAAATTAACTTCTCAGAGTTTGTTCCGGCAAGTGATGCCGATACTGTGAATATCAAATACACAGATT
CTGGTAAAATAACAGGAGTTTTGATAAGCTCAAAAATGCTTGATTATTCTAATCTTGAATTCCCTTTTACAGAATTTCCA
AAAGGAATTGATGTTACTTTATACGACAAAAAACAAAAGCGTACCTTTATTAGATCAAATTATGCTGTATCCTATAAAAA
TACAAGTATAATAGATTTACAGGGAAAAGTTAAAATTACCTCAGAAGCGGGACAGGTTTTGGAAACAGAACAAATGTTTT
TTGATCAAAAAAATGAGTGGTTTTACACAGAAAGAAAATTTAAACTTACAGATGCTAAAGGAGTTTCTTTTGGTCAGGGA
ATTGATTTTAGCAAAGACTTTAAAGTGATTAATTCGCAGCGAATAAGCGGTGAATTTGAATCAGACGAAGAATTATAA

Upstream 100 bases:

>100_bases
GGATTCTCATTTAATGATAAATGGTTTGTGAAGAGCAAATTCAACTAAACATAAAAATATATGTTTTTATAAGCTCATTA
CAATTTATTACATTTGGCAA

Downstream 100 bases:

>100_bases
TTATGGGATATTTAAAATACACACAATACGTTTACATCTTATTTGCAGTTTACTTTATCTATGATGGAGTAATAAAGCTT
ACCGAAAATAACGAAGCCTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MNLPKRYITSVVTVIAVTLFFGCESNFKEVQKINFSEFVPASDADTVNIKYTDSGKITGVLISSKMLDYSNLEFPFTEFP
KGIDVTLYDKKQKRTFIRSNYAVSYKNTSIIDLQGKVKITSEAGQVLETEQMFFDQKNEWFYTERKFKLTDAKGVSFGQG
IDFSKDFKVINSQRISGEFESDEEL

Sequences:

>Translated_185_residues
MNLPKRYITSVVTVIAVTLFFGCESNFKEVQKINFSEFVPASDADTVNIKYTDSGKITGVLISSKMLDYSNLEFPFTEFP
KGIDVTLYDKKQKRTFIRSNYAVSYKNTSIIDLQGKVKITSEAGQVLETEQMFFDQKNEWFYTERKFKLTDAKGVSFGQG
IDFSKDFKVINSQRISGEFESDEEL
>Mature_185_residues
MNLPKRYITSVVTVIAVTLFFGCESNFKEVQKINFSEFVPASDADTVNIKYTDSGKITGVLISSKMLDYSNLEFPFTEFP
KGIDVTLYDKKQKRTFIRSNYAVSYKNTSIIDLQGKVKITSEAGQVLETEQMFFDQKNEWFYTERKFKLTDAKGVSFGQG
IDFSKDFKVINSQRISGEFESDEEL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21187; Mature: 21187

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLPKRYITSVVTVIAVTLFFGCESNFKEVQKINFSEFVPASDADTVNIKYTDSGKITGV
CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHCCCCCCCCEEEEEECCCCCEEEE
LISSKMLDYSNLEFPFTEFPKGIDVTLYDKKQKRTFIRSNYAVSYKNTSIIDLQGKVKIT
EEECCCCCCCCCCCCHHHCCCCCEEEEECCHHHHHHHHCCEEEEECCCEEEEECCCEEEE
SEAGQVLETEQMFFDQKNEWFYTERKFKLTDAKGVSFGQGIDFSKDFKVINSQRISGEFE
CCCCCHHHHHHHHHCCCCCEEEECEEEEEECCCCCCCCCCCCCCCCHHEECCEECCCCCC
SDEEL
CCCCC
>Mature Secondary Structure
MNLPKRYITSVVTVIAVTLFFGCESNFKEVQKINFSEFVPASDADTVNIKYTDSGKITGV
CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHCCCCCCCCEEEEEECCCCCEEEE
LISSKMLDYSNLEFPFTEFPKGIDVTLYDKKQKRTFIRSNYAVSYKNTSIIDLQGKVKIT
EEECCCCCCCCCCCCHHHCCCCCEEEEECCHHHHHHHHCCEEEEECCCEEEEECCCEEEE
SEAGQVLETEQMFFDQKNEWFYTERKFKLTDAKGVSFGQGIDFSKDFKVINSQRISGEFE
CCCCCHHHHHHHHHCCCCCEEEECEEEEEECCCCCCCCCCCCCCCCHHEECCEECCCCCC
SDEEL
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA