| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is coaX
Identifier: 146299171
GI number: 146299171
Start: 1617439
End: 1618173
Strand: Direct
Name: coaX
Synonym: Fjoh_1411
Alternate gene names: 146299171
Gene position: 1617439-1618173 (Clockwise)
Preceding gene: 146299170
Following gene: 146299172
Centisome position: 26.53
GC content: 35.78
Gene sequence:
>735_bases ATGATTTTAACTGTCGATGTTGGAAATACCAGAATTAAAGCTGCTGTCTTTGAAGGGAGTAGTGTTTTGGAGTATTTCGT TTTTGAAAAAAATGAGCTTGAAAAAAGAATTGAAAAAATTTTAGAAAAATTTCCAAACTGCTCAGATTTGGTTGTTGCCT CGGTTGGAGATGTCGAAAAACAATCTTTTTTGAGTTTTGAAAAACAGTTAAATGTTCATTTTTTTACACACGAAGATATT TTCCCGTTTCATAATAAATATGCAACACCAAAAACTTTAGGAATCGACAGAATGATTTTGGCTGCCGGAGCAACACTGCA GTTTCCGAAACAAAATCGATTAGTTATAGATGCCGGAACCTGCATTACCTACGATTTTATCGACGAAAACGATAATTATC TGGGCGGTGCAATCTCTCCAGGGCTTCGTTTGCGTTACGAAACCTTACACAATTACACAGCCAGACTCCCTTTGCTTACT TTAGATCAGCCCCATTCTTACATTGGAGATTCAACCGCACAGGCGATTCATTCTGGTGTTGTGAATGGTTTCGTCTATGA GATTGACGGTTTTATCGATGAATATCGCTCGAACTTTTCAAATTTTATAATAATTTTAACGGGAGGCGATGCAGAATTTT TGGCTAAACGATTAAAAAATACCATATTTGCCAATTCAAATTTCCTTCTGGAGAGTTTGAGCCAAACATATCAATATAAA ATCGACAATGATTAA
Upstream 100 bases:
>100_bases TTGTGCTCAATGCGGGTGCAAAGATAGAATCATTTTCCGTTTATCCAAAACATTTTAGAAAAAAAATCAATTCGTATCTT CGCAAAAACAAAAAAGAAAA
Downstream 100 bases:
>100_bases AAAAATTATAATAAGTGCTTGTTTGCTTATATCGTTCGTTTCATTTGCTCAGCAAGGTACTGCATCGCCATATTCTTTTT ATGGAATTGGAGATATCAAG
Product: pantothenate kinase
Products: NA
Alternate protein names: PanK-III; Pantothenic acid kinase
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MILTVDVGNTRIKAAVFEGSSVLEYFVFEKNELEKRIEKILEKFPNCSDLVVASVGDVEKQSFLSFEKQLNVHFFTHEDI FPFHNKYATPKTLGIDRMILAAGATLQFPKQNRLVIDAGTCITYDFIDENDNYLGGAISPGLRLRYETLHNYTARLPLLT LDQPHSYIGDSTAQAIHSGVVNGFVYEIDGFIDEYRSNFSNFIIILTGGDAEFLAKRLKNTIFANSNFLLESLSQTYQYK IDND
Sequences:
>Translated_244_residues MILTVDVGNTRIKAAVFEGSSVLEYFVFEKNELEKRIEKILEKFPNCSDLVVASVGDVEKQSFLSFEKQLNVHFFTHEDI FPFHNKYATPKTLGIDRMILAAGATLQFPKQNRLVIDAGTCITYDFIDENDNYLGGAISPGLRLRYETLHNYTARLPLLT LDQPHSYIGDSTAQAIHSGVVNGFVYEIDGFIDEYRSNFSNFIIILTGGDAEFLAKRLKNTIFANSNFLLESLSQTYQYK IDND >Mature_244_residues MILTVDVGNTRIKAAVFEGSSVLEYFVFEKNELEKRIEKILEKFPNCSDLVVASVGDVEKQSFLSFEKQLNVHFFTHEDI FPFHNKYATPKTLGIDRMILAAGATLQFPKQNRLVIDAGTCITYDFIDENDNYLGGAISPGLRLRYETLHNYTARLPLLT LDQPHSYIGDSTAQAIHSGVVNGFVYEIDGFIDEYRSNFSNFIIILTGGDAEFLAKRLKNTIFANSNFLLESLSQTYQYK IDND
Specific function: Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
COG id: COG1521
COG function: function code K; Putative transcriptional regulator, homolog of Bvg accessory factor
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the type III pantothenate kinase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): COAX_FLAJ1 (A5FK26)
Other databases:
- EMBL: CP000685 - RefSeq: YP_001193762.1 - ProteinModelPortal: A5FK26 - SMR: A5FK26 - STRING: A5FK26 - GeneID: 5094168 - GenomeReviews: CP000685_GR - KEGG: fjo:Fjoh_1411 - eggNOG: COG1521 - HOGENOM: HBG634537 - OMA: YPELLVF - ProtClustDB: PRK13320 - BioCyc: FJOH376686:FJOH_1411-MONOMER - GO: GO:0005737 - HAMAP: MF_01274 - InterPro: IPR004619 - TIGRFAMs: TIGR00671
Pfam domain/function: PF03309 Bvg_acc_factor
EC number: =2.7.1.33
Molecular weight: Translated: 27636; Mature: 27636
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: ACT_SITE 96-96 BINDING 87-87 BINDING 120-120 BINDING 172-172
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILTVDVGNTRIKAAVFEGSSVLEYFVFEKNELEKRIEKILEKFPNCSDLVVASVGDVEK CEEEEECCCCEEEEEEECCCCEEHHHHCCHHHHHHHHHHHHHHCCCCCCEEEECCCCHHH QSFLSFEKQLNVHFFTHEDIFPFHNKYATPKTLGIDRMILAAGATLQFPKQNRLVIDAGT HHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCHHEECCCCEEECCCCCCEEEECCC CITYDFIDENDNYLGGAISPGLRLRYETLHNYTARLPLLTLDQPHSYIGDSTAQAIHSGV EEEEEEECCCCCEECCCCCCCCEEEHHHHHCHHHCCCEEEECCCCHHCCCHHHHHHHHHH VNGFVYEIDGFIDEYRSNFSNFIIILTGGDAEFLAKRLKNTIFANSNFLLESLSQTYQYK HHCEEEEHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHEECCCHHHHHHHHHHEEEE IDND ECCC >Mature Secondary Structure MILTVDVGNTRIKAAVFEGSSVLEYFVFEKNELEKRIEKILEKFPNCSDLVVASVGDVEK CEEEEECCCCEEEEEEECCCCEEHHHHCCHHHHHHHHHHHHHHCCCCCCEEEECCCCHHH QSFLSFEKQLNVHFFTHEDIFPFHNKYATPKTLGIDRMILAAGATLQFPKQNRLVIDAGT HHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCHHEECCCCEEECCCCCCEEEECCC CITYDFIDENDNYLGGAISPGLRLRYETLHNYTARLPLLTLDQPHSYIGDSTAQAIHSGV EEEEEEECCCCCEECCCCCCCCEEEHHHHHCHHHCCCEEEECCCCHHCCCHHHHHHHHHH VNGFVYEIDGFIDEYRSNFSNFIIILTGGDAEFLAKRLKNTIFANSNFLLESLSQTYQYK HHCEEEEHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHEECCCHHHHHHHHHHEEEE IDND ECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA