| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146299167
Identifier: 146299167
GI number: 146299167
Start: 1609076
End: 1610176
Strand: Direct
Name: 146299167
Synonym: Fjoh_1407
Alternate gene names: NA
Gene position: 1609076-1610176 (Clockwise)
Preceding gene: 146299166
Following gene: 146299168
Centisome position: 26.39
GC content: 37.15
Gene sequence:
>1101_bases ATGAAAAATATATATAAAGTTTTAATCGCATTTATTGGTGTATTGGCAGTGTCATGTAATGCAGATGCTGTAGACGAAAG ACCAGTTCTTAATGTTGTTTCAGCACCAGAAATTACTGCTCCTGCAACAGGACAAAATTATGTTCTAGATGTTGAAAAAG CAGCAGAAGAGGCAGCGAAATTTACATGGTCAGCTGCAGAATATTCAACAAATGTTGCTGTAAAATACACCTTGTTAATT GATAAAAAAGGAGGTGATTTTAGTGCTGCAAAAACATTGCAGACTACAACAAACAGTATTACTGAAGTGTCTGTACTTGC CAGAGAATTGAATCAGGCAGCGATTGATCTTGGAGGAAAACCTGAAGAAGCTGCTCAGTACGATGTAAAAATTAAATCTG ATGTTTCTGGAGGATTTCCTCAGGTGTCTAAAGGTTTAATTACAATCACAGTTACTCCTTACACAGGAAAAGTTCCTTAT GATTTTAATGACTGGTACTTAGTTGGAGACGCAACCGTTTCTGGATGGGATAACAATAAAGGGAACCAAATTTTATTTAG AAGCGCTGCAAATGCTAATGAATATAAATTTACAGGATTCTTCAAAAAAGGTGTATTCAAGGCTATCAAAAACCTAGGAA GCTGGGCTCCAATGTATGGAGGGAAAGATGGATCTTTAGCTTATAGAGCAACAGAAGGAGATCAAGATCCGGCAAGTTTT GAAATTCCTGCAGATGGATATTACACTTTTGTTATGGATGTTCAAAAATTAACCTACACATTAGCTCCATATGCAGCAGG TGCGGGAGCAACAGTTTATAACACAATTGGTATTATTGGAGATGCAACTGCTAAAGGGTGGGATGCTTCAACGCCAATGG TTAAATCTGCTTTTAATGCTCACATCTGGACTTTAGGCGTGACATCTCTAAATGATGGAGGAATGAAATTTAGAGCTAAT GATGCTTGGGATGTGTCTTGGGGAGGCAAAACAGCTTTTTCAGGTGGAGGAACTGGTGATAACATACCAGTAGCTAAATC TAAATATGTTATCTATTTCAATGATTTAGACGGAAGTTATTTGATGATTCCAAATCAATAA
Upstream 100 bases:
>100_bases GAATCTTTTAGAGATTTAATGCCTATTCCTGCGAAAACAATTCAGGCTAATCCGACTTTAAAACAAAATCCAGGATACTA ACACCTAATAGAACTTAAAA
Downstream 100 bases:
>100_bases TAAACTTTCTTCATACTAAAATGGGGCTATCTGCTAGATAGCCCTTTTTTAATCAGACTGACTAACCGAAAAAACCACAC TATTATGAAAAAAACTTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 366; Mature: 366
Protein sequence:
>366_residues MKNIYKVLIAFIGVLAVSCNADAVDERPVLNVVSAPEITAPATGQNYVLDVEKAAEEAAKFTWSAAEYSTNVAVKYTLLI DKKGGDFSAAKTLQTTTNSITEVSVLARELNQAAIDLGGKPEEAAQYDVKIKSDVSGGFPQVSKGLITITVTPYTGKVPY DFNDWYLVGDATVSGWDNNKGNQILFRSAANANEYKFTGFFKKGVFKAIKNLGSWAPMYGGKDGSLAYRATEGDQDPASF EIPADGYYTFVMDVQKLTYTLAPYAAGAGATVYNTIGIIGDATAKGWDASTPMVKSAFNAHIWTLGVTSLNDGGMKFRAN DAWDVSWGGKTAFSGGGTGDNIPVAKSKYVIYFNDLDGSYLMIPNQ
Sequences:
>Translated_366_residues MKNIYKVLIAFIGVLAVSCNADAVDERPVLNVVSAPEITAPATGQNYVLDVEKAAEEAAKFTWSAAEYSTNVAVKYTLLI DKKGGDFSAAKTLQTTTNSITEVSVLARELNQAAIDLGGKPEEAAQYDVKIKSDVSGGFPQVSKGLITITVTPYTGKVPY DFNDWYLVGDATVSGWDNNKGNQILFRSAANANEYKFTGFFKKGVFKAIKNLGSWAPMYGGKDGSLAYRATEGDQDPASF EIPADGYYTFVMDVQKLTYTLAPYAAGAGATVYNTIGIIGDATAKGWDASTPMVKSAFNAHIWTLGVTSLNDGGMKFRAN DAWDVSWGGKTAFSGGGTGDNIPVAKSKYVIYFNDLDGSYLMIPNQ >Mature_366_residues MKNIYKVLIAFIGVLAVSCNADAVDERPVLNVVSAPEITAPATGQNYVLDVEKAAEEAAKFTWSAAEYSTNVAVKYTLLI DKKGGDFSAAKTLQTTTNSITEVSVLARELNQAAIDLGGKPEEAAQYDVKIKSDVSGGFPQVSKGLITITVTPYTGKVPY DFNDWYLVGDATVSGWDNNKGNQILFRSAANANEYKFTGFFKKGVFKAIKNLGSWAPMYGGKDGSLAYRATEGDQDPASF EIPADGYYTFVMDVQKLTYTLAPYAAGAGATVYNTIGIIGDATAKGWDASTPMVKSAFNAHIWTLGVTSLNDGGMKFRAN DAWDVSWGGKTAFSGGGTGDNIPVAKSKYVIYFNDLDGSYLMIPNQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39210; Mature: 39210
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00678 WD_REPEATS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNIYKVLIAFIGVLAVSCNADAVDERPVLNVVSAPEITAPATGQNYVLDVEKAAEEAAK CCHHHHHHHHHHHHHEEECCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEHHHHHHHHHH FTWSAAEYSTNVAVKYTLLIDKKGGDFSAAKTLQTTTNSITEVSVLARELNQAAIDLGGK EEEEHHHCCCCEEEEEEEEEECCCCCCHHHHEEHHCCCCHHHHHHHHHHHHHHHCCCCCC PEEAAQYDVKIKSDVSGGFPQVSKGLITITVTPYTGKVPYDFNDWYLVGDATVSGWDNNK CCCCCEEEEEEECCCCCCCCHHCCCEEEEEECCCCCCCCCCCCCEEEEECCEEECCCCCC GNQILFRSAANANEYKFTGFFKKGVFKAIKNLGSWAPMYGGKDGSLAYRATEGDQDPASF CCEEEEEECCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCEE EIPADGYYTFVMDVQKLTYTLAPYAAGAGATVYNTIGIIGDATAKGWDASTPMVKSAFNA ECCCCCEEEEEEEEEHHHEEECCCCCCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHCCC HIWTLGVTSLNDGGMKFRANDAWDVSWGGKTAFSGGGTGDNIPVAKSKYVIYFNDLDGSY EEEEEEEEEECCCCEEEECCCCEEECCCCCEEECCCCCCCCCCCCCCEEEEEEECCCCCE LMIPNQ EEECCC >Mature Secondary Structure MKNIYKVLIAFIGVLAVSCNADAVDERPVLNVVSAPEITAPATGQNYVLDVEKAAEEAAK CCHHHHHHHHHHHHHEEECCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEHHHHHHHHHH FTWSAAEYSTNVAVKYTLLIDKKGGDFSAAKTLQTTTNSITEVSVLARELNQAAIDLGGK EEEEHHHCCCCEEEEEEEEEECCCCCCHHHHEEHHCCCCHHHHHHHHHHHHHHHCCCCCC PEEAAQYDVKIKSDVSGGFPQVSKGLITITVTPYTGKVPYDFNDWYLVGDATVSGWDNNK CCCCCEEEEEEECCCCCCCCHHCCCEEEEEECCCCCCCCCCCCCEEEEECCEEECCCCCC GNQILFRSAANANEYKFTGFFKKGVFKAIKNLGSWAPMYGGKDGSLAYRATEGDQDPASF CCEEEEEECCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCEE EIPADGYYTFVMDVQKLTYTLAPYAAGAGATVYNTIGIIGDATAKGWDASTPMVKSAFNA ECCCCCEEEEEEEEEHHHEEECCCCCCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHCCC HIWTLGVTSLNDGGMKFRANDAWDVSWGGKTAFSGGGTGDNIPVAKSKYVIYFNDLDGSY EEEEEEEEEECCCCEEEECCCCEEECCCCCEEECCCCCCCCCCCCCCEEEEEEECCCCCE LMIPNQ EEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA