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The map label for this gene is 146299166

Identifier: 146299166

GI number: 146299166

Start: 1607452

End: 1609056

Strand: Direct

Name: 146299166

Synonym: Fjoh_1406

Alternate gene names: NA

Gene position: 1607452-1609056 (Clockwise)

Preceding gene: 146299165

Following gene: 146299167

Centisome position: 26.37

GC content: 35.83

Gene sequence:

>1605_bases
ATGAAAATATCATTTAAATATATATCTTATTTCTTCCTATTTATCTTAGGAATAAGTATGACGCTTACTTCGTGTACTGA
CGATTTAAACGTGACACCAAAAGATGACGATGAGTTTTTATCTGAGACCTTTTTCCAGGATCCAGCATCTTACAAACAAG
TTTTAGCAAAATTATATGCTGGTTTATATGTTGGAGGTAATGACGGTGACGGACAAGCTGATATTGCAGGTCTTAGCGGA
GATTTCAGCAGTTATTTACGTTTGCTTTTTGTAACACAGGAATTTACAACAGATGAAGCGATTATTGCCTGGGCTGATGG
TACTTTACCAACATTGAACACGCAGACTTGGTCTCCTCAAAATGAGTTTTTATACGGAACTTATTCAAGAGCATCTTATC
ATATCAGTTTAGCAAATGAGTTTTTAAGACAAACTACAGATGAGAAATTAAATGCCAGAGGTGTTGATGCTAATTTAAAA
GCTGAAATTGCAACTTTTAGAGCTGAAGCACGTTTCTTAAGAGCTTTTTCTTATGTTAACTTAATGGACTTATTTGGTAA
TGTGCCTATTACTACAGAAGCAGATCCAGTTGGCTTCTTTTATCCAGTTCAAAAATCAAGAGCGGAAGTTTTTGCTTTTG
TAGAATCTGAATTAAAAGATTTAGACAGCAGTCTGCCAAATGCAAGAACGAATGAGTATGGAAGAATAGACAAAGTTGCC
GCTAAATTTTTGTTAGCTCAAATTTATCTAAATGCTAAGGTTTACACTGGAACAGAAAAAAATAATGAAGTAGGTACTTT
ATGTACTGAAATCATTAACTCAGGATATACTTTTGCAAACGTTCCTTATGCGTATTTGTTTTCTGCGGATAATGATAAAA
ATGGAGCGCAAAACGAAGTTATTTTCCCAATCATAAGTGATGGAAATGCTATCAGAGCAACTGGTGGAGGAATGAGTTTT
ATTCTTCACGCTTCTATTGGAGGAAGCATGGATGCCGCTTCAAGAGGAATGGACGGAGGATGGCAGGGTATCAGAACTCG
TAAAGAGTTTGTGGCTCTTTTCCCTGATGCAACAGCAACAGGAGATAAAAGAGGAACTTTCTATACTGATGGACAGGCTT
TAGATATTACGAATGTATCAACATTTACAGATGGTTATGCTGTAACAAAATACATAAATAAAAAAGCTGATGGTTCACCA
GCACAAAGAACTGATATTCCTGATACTGATTTTCCAGTTTTTAGAATTTCTGATGCTTATTTAATGTATGCAGAAGCGGC
AGTTAGAGGTGCTAGTACAGCAAACATTGGAACTGCAGTAAATTATATTAACCAAATTAGAACAAGAGCGGAAGCATCTA
CAATATCTGCTGCAAATTTGAATCTTGATTTTATCCTTGCAGAGAGAGGTAGAGAATTGTTTTGGGAATGTCACAGAAGA
ACGGATTTAATTCGTTTTGGTAAATTCACAGGAGGATCTAAAATCTGGCAATGGAAAGGCGGAACAATGAATGGTGTTGC
GACAGAATCTTTTAGAGATTTAATGCCTATTCCTGCGAAAACAATTCAGGCTAATCCGACTTTAAAACAAAATCCAGGAT
ACTAA

Upstream 100 bases:

>100_bases
GAATTGACGGTAACGTTTACCCAAGAGCAAGAACTTTCTTGTTTGGAGTAAATGCAAGTTTCTAATAGTACATTGAAAAA
CAAAATTTAAAACATACAAA

Downstream 100 bases:

>100_bases
CACCTAATAGAACTTAAAAATGAAAAATATATATAAAGTTTTAATCGCATTTATTGGTGTATTGGCAGTGTCATGTAATG
CAGATGCTGTAGACGAAAGA

Product: RagB/SusD domain-containing protein

Products: NA

Alternate protein names: Outer Membrane Protein; RagB/SusD Domain-Containing Protein; Ragb/Susd Domain Protein; SusD/RagB Family Protein; SusD Outer Membrane Protein; Outer Membrane Protein SusD; RagB/SusD Family Protein; SusD Family Protein; Lipoprotein

Number of amino acids: Translated: 534; Mature: 534

Protein sequence:

>534_residues
MKISFKYISYFFLFILGISMTLTSCTDDLNVTPKDDDEFLSETFFQDPASYKQVLAKLYAGLYVGGNDGDGQADIAGLSG
DFSSYLRLLFVTQEFTTDEAIIAWADGTLPTLNTQTWSPQNEFLYGTYSRASYHISLANEFLRQTTDEKLNARGVDANLK
AEIATFRAEARFLRAFSYVNLMDLFGNVPITTEADPVGFFYPVQKSRAEVFAFVESELKDLDSSLPNARTNEYGRIDKVA
AKFLLAQIYLNAKVYTGTEKNNEVGTLCTEIINSGYTFANVPYAYLFSADNDKNGAQNEVIFPIISDGNAIRATGGGMSF
ILHASIGGSMDAASRGMDGGWQGIRTRKEFVALFPDATATGDKRGTFYTDGQALDITNVSTFTDGYAVTKYINKKADGSP
AQRTDIPDTDFPVFRISDAYLMYAEAAVRGASTANIGTAVNYINQIRTRAEASTISAANLNLDFILAERGRELFWECHRR
TDLIRFGKFTGGSKIWQWKGGTMNGVATESFRDLMPIPAKTIQANPTLKQNPGY

Sequences:

>Translated_534_residues
MKISFKYISYFFLFILGISMTLTSCTDDLNVTPKDDDEFLSETFFQDPASYKQVLAKLYAGLYVGGNDGDGQADIAGLSG
DFSSYLRLLFVTQEFTTDEAIIAWADGTLPTLNTQTWSPQNEFLYGTYSRASYHISLANEFLRQTTDEKLNARGVDANLK
AEIATFRAEARFLRAFSYVNLMDLFGNVPITTEADPVGFFYPVQKSRAEVFAFVESELKDLDSSLPNARTNEYGRIDKVA
AKFLLAQIYLNAKVYTGTEKNNEVGTLCTEIINSGYTFANVPYAYLFSADNDKNGAQNEVIFPIISDGNAIRATGGGMSF
ILHASIGGSMDAASRGMDGGWQGIRTRKEFVALFPDATATGDKRGTFYTDGQALDITNVSTFTDGYAVTKYINKKADGSP
AQRTDIPDTDFPVFRISDAYLMYAEAAVRGASTANIGTAVNYINQIRTRAEASTISAANLNLDFILAERGRELFWECHRR
TDLIRFGKFTGGSKIWQWKGGTMNGVATESFRDLMPIPAKTIQANPTLKQNPGY
>Mature_534_residues
MKISFKYISYFFLFILGISMTLTSCTDDLNVTPKDDDEFLSETFFQDPASYKQVLAKLYAGLYVGGNDGDGQADIAGLSG
DFSSYLRLLFVTQEFTTDEAIIAWADGTLPTLNTQTWSPQNEFLYGTYSRASYHISLANEFLRQTTDEKLNARGVDANLK
AEIATFRAEARFLRAFSYVNLMDLFGNVPITTEADPVGFFYPVQKSRAEVFAFVESELKDLDSSLPNARTNEYGRIDKVA
AKFLLAQIYLNAKVYTGTEKNNEVGTLCTEIINSGYTFANVPYAYLFSADNDKNGAQNEVIFPIISDGNAIRATGGGMSF
ILHASIGGSMDAASRGMDGGWQGIRTRKEFVALFPDATATGDKRGTFYTDGQALDITNVSTFTDGYAVTKYINKKADGSP
AQRTDIPDTDFPVFRISDAYLMYAEAAVRGASTANIGTAVNYINQIRTRAEASTISAANLNLDFILAERGRELFWECHRR
TDLIRFGKFTGGSKIWQWKGGTMNGVATESFRDLMPIPAKTIQANPTLKQNPGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58950; Mature: 58950

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISFKYISYFFLFILGISMTLTSCTDDLNVTPKDDDEFLSETFFQDPASYKQVLAKLYA
CEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHH
GLYVGGNDGDGQADIAGLSGDFSSYLRLLFVTQEFTTDEAIIAWADGTLPTLNTQTWSPQ
CEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCC
NEFLYGTYSRASYHISLANEFLRQTTDEKLNARGVDANLKAEIATFRAEARFLRAFSYVN
CCEEEEEECCCEEEEHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LMDLFGNVPITTEADPVGFFYPVQKSRAEVFAFVESELKDLDSSLPNARTNEYGRIDKVA
HHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
AKFLLAQIYLNAKVYTGTEKNNEVGTLCTEIINSGYTFANVPYAYLFSADNDKNGAQNEV
HHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHCCCEEECCCEEEEEECCCCCCCCCCCE
IFPIISDGNAIRATGGGMSFILHASIGGSMDAASRGMDGGWQGIRTRKEFVALFPDATAT
EEEEECCCCEEEECCCCEEEEEEECCCCCHHHHHCCCCCCHHHHHCHHHHEEECCCCCCC
GDKRGTFYTDGQALDITNVSTFTDGYAVTKYINKKADGSPAQRTDIPDTDFPVFRISDAY
CCCCCCEEECCCEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCE
LMYAEAAVRGASTANIGTAVNYINQIRTRAEASTISAANLNLDFILAERGRELFWECHRR
EEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCEEEEEECCCHHHHHHHHHH
TDLIRFGKFTGGSKIWQWKGGTMNGVATESFRDLMPIPAKTIQANPTLKQNPGY
HHHEEECCCCCCCEEEEECCCCCCCCCHHHHHHCCCCCCHHEECCCCCCCCCCC
>Mature Secondary Structure
MKISFKYISYFFLFILGISMTLTSCTDDLNVTPKDDDEFLSETFFQDPASYKQVLAKLYA
CEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHH
GLYVGGNDGDGQADIAGLSGDFSSYLRLLFVTQEFTTDEAIIAWADGTLPTLNTQTWSPQ
CEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCC
NEFLYGTYSRASYHISLANEFLRQTTDEKLNARGVDANLKAEIATFRAEARFLRAFSYVN
CCEEEEEECCCEEEEHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LMDLFGNVPITTEADPVGFFYPVQKSRAEVFAFVESELKDLDSSLPNARTNEYGRIDKVA
HHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
AKFLLAQIYLNAKVYTGTEKNNEVGTLCTEIINSGYTFANVPYAYLFSADNDKNGAQNEV
HHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHCCCEEECCCEEEEEECCCCCCCCCCCE
IFPIISDGNAIRATGGGMSFILHASIGGSMDAASRGMDGGWQGIRTRKEFVALFPDATAT
EEEEECCCCEEEECCCCEEEEEEECCCCCHHHHHCCCCCCHHHHHCHHHHEEECCCCCCC
GDKRGTFYTDGQALDITNVSTFTDGYAVTKYINKKADGSPAQRTDIPDTDFPVFRISDAY
CCCCCCEEECCCEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCE
LMYAEAAVRGASTANIGTAVNYINQIRTRAEASTISAANLNLDFILAERGRELFWECHRR
EEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCEEEEEECCCHHHHHHHHHH
TDLIRFGKFTGGSKIWQWKGGTMNGVATESFRDLMPIPAKTIQANPTLKQNPGY
HHHEEECCCCCCCEEEEECCCCCCCCCHHHHHHCCCCCCHHEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA