| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146299051
Identifier: 146299051
GI number: 146299051
Start: 1473717
End: 1475474
Strand: Direct
Name: 146299051
Synonym: Fjoh_1291
Alternate gene names: NA
Gene position: 1473717-1475474 (Clockwise)
Preceding gene: 146299043
Following gene: 146299054
Centisome position: 24.17
GC content: 29.12
Gene sequence:
>1758_bases ATGAGGCTAATCATTTCTTTTTTACTTTTTTTTGTTGTGAACGTCTCTTTTTCTCAACAAACTAAAGAATTAACAGAACA AGAATATTTACTCTTGCAGGATAAGATTCGATTAAATTTGAATGCAAACAGAGATAGTGCTGCAGTATATGCTAATGAAA TGGCAAAATCCGGTAATTATAAACACTTAGCTTTTGCAAATGTCGCACAAGCTTATTTACTTCAGTTAAAAGATAATACC GCAAAATCTAAAGAAAAATACGATCAGGCATTTAAATACTTAGAGAAAATGCCGGACTCAAAAGATAAAGATCAGCTCAA AGCTTATTTGTATAATTATGGAGGATTAATAGAAGGGGCAAGAGGAAACTATAGTAAAGCCCTTGAAAATTATCAAACAG GAATGAAGATCTCTACTAACATTGGAGACATTATTCAAATTGTAAAATTTAAAAGCAATATTGCTTTTATAAACGAGGCC ATAGGAAATTATCAATTAGCTATTAAAAATTTAAAACAGTTAAATACTTTTATTGATAATAATGAAAGCTATTTTACCAA ACAGCAGTTTAATACAGTTAAAAGCAGTAATAATTTAACTTTAGCCGCATCTTATGAAGGCTGGTATATGAAAAACCAGT CTCCAATGTATCTGCTGGATTCTGCAGCATATTTTTATAAAAAGACGGTTTCGTATTCTCAAAACTTACCCATAAATAAT ATTAAGGCAAAAATTAGCCTGGGGAATGTTTACTATATGAAAAATGATTATAAGAATGCCGAAAAGACGTATTATAATAT TGTTTTTTATGCCAAACAAAATAATCTAAAAAGAGAATATAAGATTGCCAATTACAATTTGGGGAATTTATATTATGAAA CCAAAAAATATGATAAAGCACTTGTATTTTTTAAGAAAGTAGATTCGATTTCAGAAATAGATAATTTAAGAGACGAAAGT TTTTTAAAATCAAATTACTATCAGGCCAAAATATACAATATATATAAAGAACCTCAGGAAGCCTTTAAGCATTCAAAGAT ATACTTAGATAATTATGAAAAATCTGAAGCAAAATTAAATAATGAAGCTTTAGAAGTAAATTATAAACTTGGTACCGACG ATTTGAGTGACGAAATGGTTACCATTCAAAAGAAATACGAAAATGATGTTTTGTTAAATAAGGCATTAAAGGTATTTTAT GTACTGCTGGTAGTAGGGATTGTATTTTTGCTTATTAAAAATATAATAGACAAAAATAAGGCACATAAAAAAATGAATGC CTTGATTGAAGAGTTTAAAGCAAATCTTGAGAAAAAAAGTATTGCCGAAGCTTCTGAAATCGAAGAAATGGAGCAAGTTC CGGATTTAGAAGAGATTAGTCTTAAGAAAGAGAATGTCGCTTTAAGTATTGATGAAGCAAAAGAGAATAAAATTGTCGAA AAGTTATTAGCTCTGGAAAGTAAATTAGAGTACTTAAATGCCGATTTCACCCTGCCTTATGTGGCCAAAAAAATCAAAAC CAATACAACTTATTTGTCATACGTTGTAAATAAACGATTTGGCAAATCTTTTGGTGAATACTCTAATGAGCTTAAGATTA ATTATGTAATCAATGAAATGATTACGAATCATATGTATCGCAAATATTCAACACAGGCTATAGCAGAAAGTGTAGGTTTT AAAAATGCTGTGTCGTTTGCTAAATCATTTCGCAAAAGAACTGGAGTTTCTCCAGCTCAATTTGCGAATAATATTTAA
Upstream 100 bases:
>100_bases TTATATCTCAGTTAGAAAATAATCACAAATAAGGTGAATTAATTTTAGTTTATTGATAATATATAAACTAATTTTGAGAT TCCAAAAAAACATATATTGA
Downstream 100 bases:
>100_bases GTTTTTATTTTTATCCAAGTGTTCCTCCGCCTCCTTTAATAGGATCTTTGTTACCATCAATTGGAGGAGTTACCGGGTCA TCGCCTCCACGAATTGCTTT
Product: response regulator receiver protein
Products: NA
Alternate protein names: Helix-Turn-Helix Domain-Containing Protein; Response Regulator Receiver Protein
Number of amino acids: Translated: 585; Mature: 585
Protein sequence:
>585_residues MRLIISFLLFFVVNVSFSQQTKELTEQEYLLLQDKIRLNLNANRDSAAVYANEMAKSGNYKHLAFANVAQAYLLQLKDNT AKSKEKYDQAFKYLEKMPDSKDKDQLKAYLYNYGGLIEGARGNYSKALENYQTGMKISTNIGDIIQIVKFKSNIAFINEA IGNYQLAIKNLKQLNTFIDNNESYFTKQQFNTVKSSNNLTLAASYEGWYMKNQSPMYLLDSAAYFYKKTVSYSQNLPINN IKAKISLGNVYYMKNDYKNAEKTYYNIVFYAKQNNLKREYKIANYNLGNLYYETKKYDKALVFFKKVDSISEIDNLRDES FLKSNYYQAKIYNIYKEPQEAFKHSKIYLDNYEKSEAKLNNEALEVNYKLGTDDLSDEMVTIQKKYENDVLLNKALKVFY VLLVVGIVFLLIKNIIDKNKAHKKMNALIEEFKANLEKKSIAEASEIEEMEQVPDLEEISLKKENVALSIDEAKENKIVE KLLALESKLEYLNADFTLPYVAKKIKTNTTYLSYVVNKRFGKSFGEYSNELKINYVINEMITNHMYRKYSTQAIAESVGF KNAVSFAKSFRKRTGVSPAQFANNI
Sequences:
>Translated_585_residues MRLIISFLLFFVVNVSFSQQTKELTEQEYLLLQDKIRLNLNANRDSAAVYANEMAKSGNYKHLAFANVAQAYLLQLKDNT AKSKEKYDQAFKYLEKMPDSKDKDQLKAYLYNYGGLIEGARGNYSKALENYQTGMKISTNIGDIIQIVKFKSNIAFINEA IGNYQLAIKNLKQLNTFIDNNESYFTKQQFNTVKSSNNLTLAASYEGWYMKNQSPMYLLDSAAYFYKKTVSYSQNLPINN IKAKISLGNVYYMKNDYKNAEKTYYNIVFYAKQNNLKREYKIANYNLGNLYYETKKYDKALVFFKKVDSISEIDNLRDES FLKSNYYQAKIYNIYKEPQEAFKHSKIYLDNYEKSEAKLNNEALEVNYKLGTDDLSDEMVTIQKKYENDVLLNKALKVFY VLLVVGIVFLLIKNIIDKNKAHKKMNALIEEFKANLEKKSIAEASEIEEMEQVPDLEEISLKKENVALSIDEAKENKIVE KLLALESKLEYLNADFTLPYVAKKIKTNTTYLSYVVNKRFGKSFGEYSNELKINYVINEMITNHMYRKYSTQAIAESVGF KNAVSFAKSFRKRTGVSPAQFANNI >Mature_585_residues MRLIISFLLFFVVNVSFSQQTKELTEQEYLLLQDKIRLNLNANRDSAAVYANEMAKSGNYKHLAFANVAQAYLLQLKDNT AKSKEKYDQAFKYLEKMPDSKDKDQLKAYLYNYGGLIEGARGNYSKALENYQTGMKISTNIGDIIQIVKFKSNIAFINEA IGNYQLAIKNLKQLNTFIDNNESYFTKQQFNTVKSSNNLTLAASYEGWYMKNQSPMYLLDSAAYFYKKTVSYSQNLPINN IKAKISLGNVYYMKNDYKNAEKTYYNIVFYAKQNNLKREYKIANYNLGNLYYETKKYDKALVFFKKVDSISEIDNLRDES FLKSNYYQAKIYNIYKEPQEAFKHSKIYLDNYEKSEAKLNNEALEVNYKLGTDDLSDEMVTIQKKYENDVLLNKALKVFY VLLVVGIVFLLIKNIIDKNKAHKKMNALIEEFKANLEKKSIAEASEIEEMEQVPDLEEISLKKENVALSIDEAKENKIVE KLLALESKLEYLNADFTLPYVAKKIKTNTTYLSYVVNKRFGKSFGEYSNELKINYVINEMITNHMYRKYSTQAIAESVGF KNAVSFAKSFRKRTGVSPAQFANNI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67812; Mature: 67812
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION L=RR ; PS01124 HTH_ARAC_FAMILY_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLIISFLLFFVVNVSFSQQTKELTEQEYLLLQDKIRLNLNANRDSAAVYANEMAKSGNY CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCCHHHHHHHHHCCCCC KHLAFANVAQAYLLQLKDNTAKSKEKYDQAFKYLEKMPDSKDKDQLKAYLYNYGGLIEGA CEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEECC RGNYSKALENYQTGMKISTNIGDIIQIVKFKSNIAFINEAIGNYQLAIKNLKQLNTFIDN CCCHHHHHHHHHCCCEEECCHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHCC NESYFTKQQFNTVKSSNNLTLAASYEGWYMKNQSPMYLLDSAAYFYKKTVSYSQNLPINN CCCEEHHHHHHHHCCCCCEEEEEECCCEEECCCCCEEEEHHHHHHHHHHHCCCCCCCCCC IKAKISLGNVYYMKNDYKNAEKTYYNIVFYAKQNNLKREYKIANYNLGNLYYETKKYDKA CEEEEEECEEEEEECCCCCCCCEEEEEEEEEECCCCCCEEEEECCCCCCEEEEHHHHHHH LVFFKKVDSISEIDNLRDESFLKSNYYQAKIYNIYKEPQEAFKHSKIYLDNYEKSEAKLN HHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHCHHHHHHCCCEEECCCCHHHHHCC NEALEVNYKLGTDDLSDEMVTIQKKYENDVLLNKALKVFYVLLVVGIVFLLIKNIIDKNK CCEEEEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH AHKKMNALIEEFKANLEKKSIAEASEIEEMEQVPDLEEISLKKENVALSIDEAKENKIVE HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCEEEEECHHHHHHHHH KLLALESKLEYLNADFTLPYVAKKIKTNTTYLSYVVNKRFGKSFGEYSNELKINYVINEM HHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHH ITNHMYRKYSTQAIAESVGFKNAVSFAKSFRKRTGVSPAQFANNI HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHCCCC >Mature Secondary Structure MRLIISFLLFFVVNVSFSQQTKELTEQEYLLLQDKIRLNLNANRDSAAVYANEMAKSGNY CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCCHHHHHHHHHCCCCC KHLAFANVAQAYLLQLKDNTAKSKEKYDQAFKYLEKMPDSKDKDQLKAYLYNYGGLIEGA CEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEECC RGNYSKALENYQTGMKISTNIGDIIQIVKFKSNIAFINEAIGNYQLAIKNLKQLNTFIDN CCCHHHHHHHHHCCCEEECCHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHCC NESYFTKQQFNTVKSSNNLTLAASYEGWYMKNQSPMYLLDSAAYFYKKTVSYSQNLPINN CCCEEHHHHHHHHCCCCCEEEEEECCCEEECCCCCEEEEHHHHHHHHHHHCCCCCCCCCC IKAKISLGNVYYMKNDYKNAEKTYYNIVFYAKQNNLKREYKIANYNLGNLYYETKKYDKA CEEEEEECEEEEEECCCCCCCCEEEEEEEEEECCCCCCEEEEECCCCCCEEEEHHHHHHH LVFFKKVDSISEIDNLRDESFLKSNYYQAKIYNIYKEPQEAFKHSKIYLDNYEKSEAKLN HHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHCHHHHHHCCCEEECCCCHHHHHCC NEALEVNYKLGTDDLSDEMVTIQKKYENDVLLNKALKVFYVLLVVGIVFLLIKNIIDKNK CCEEEEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH AHKKMNALIEEFKANLEKKSIAEASEIEEMEQVPDLEEISLKKENVALSIDEAKENKIVE HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCEEEEECHHHHHHHHH KLLALESKLEYLNADFTLPYVAKKIKTNTTYLSYVVNKRFGKSFGEYSNELKINYVINEM HHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHH ITNHMYRKYSTQAIAESVGFKNAVSFAKSFRKRTGVSPAQFANNI HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA