Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146299051

Identifier: 146299051

GI number: 146299051

Start: 1473717

End: 1475474

Strand: Direct

Name: 146299051

Synonym: Fjoh_1291

Alternate gene names: NA

Gene position: 1473717-1475474 (Clockwise)

Preceding gene: 146299043

Following gene: 146299054

Centisome position: 24.17

GC content: 29.12

Gene sequence:

>1758_bases
ATGAGGCTAATCATTTCTTTTTTACTTTTTTTTGTTGTGAACGTCTCTTTTTCTCAACAAACTAAAGAATTAACAGAACA
AGAATATTTACTCTTGCAGGATAAGATTCGATTAAATTTGAATGCAAACAGAGATAGTGCTGCAGTATATGCTAATGAAA
TGGCAAAATCCGGTAATTATAAACACTTAGCTTTTGCAAATGTCGCACAAGCTTATTTACTTCAGTTAAAAGATAATACC
GCAAAATCTAAAGAAAAATACGATCAGGCATTTAAATACTTAGAGAAAATGCCGGACTCAAAAGATAAAGATCAGCTCAA
AGCTTATTTGTATAATTATGGAGGATTAATAGAAGGGGCAAGAGGAAACTATAGTAAAGCCCTTGAAAATTATCAAACAG
GAATGAAGATCTCTACTAACATTGGAGACATTATTCAAATTGTAAAATTTAAAAGCAATATTGCTTTTATAAACGAGGCC
ATAGGAAATTATCAATTAGCTATTAAAAATTTAAAACAGTTAAATACTTTTATTGATAATAATGAAAGCTATTTTACCAA
ACAGCAGTTTAATACAGTTAAAAGCAGTAATAATTTAACTTTAGCCGCATCTTATGAAGGCTGGTATATGAAAAACCAGT
CTCCAATGTATCTGCTGGATTCTGCAGCATATTTTTATAAAAAGACGGTTTCGTATTCTCAAAACTTACCCATAAATAAT
ATTAAGGCAAAAATTAGCCTGGGGAATGTTTACTATATGAAAAATGATTATAAGAATGCCGAAAAGACGTATTATAATAT
TGTTTTTTATGCCAAACAAAATAATCTAAAAAGAGAATATAAGATTGCCAATTACAATTTGGGGAATTTATATTATGAAA
CCAAAAAATATGATAAAGCACTTGTATTTTTTAAGAAAGTAGATTCGATTTCAGAAATAGATAATTTAAGAGACGAAAGT
TTTTTAAAATCAAATTACTATCAGGCCAAAATATACAATATATATAAAGAACCTCAGGAAGCCTTTAAGCATTCAAAGAT
ATACTTAGATAATTATGAAAAATCTGAAGCAAAATTAAATAATGAAGCTTTAGAAGTAAATTATAAACTTGGTACCGACG
ATTTGAGTGACGAAATGGTTACCATTCAAAAGAAATACGAAAATGATGTTTTGTTAAATAAGGCATTAAAGGTATTTTAT
GTACTGCTGGTAGTAGGGATTGTATTTTTGCTTATTAAAAATATAATAGACAAAAATAAGGCACATAAAAAAATGAATGC
CTTGATTGAAGAGTTTAAAGCAAATCTTGAGAAAAAAAGTATTGCCGAAGCTTCTGAAATCGAAGAAATGGAGCAAGTTC
CGGATTTAGAAGAGATTAGTCTTAAGAAAGAGAATGTCGCTTTAAGTATTGATGAAGCAAAAGAGAATAAAATTGTCGAA
AAGTTATTAGCTCTGGAAAGTAAATTAGAGTACTTAAATGCCGATTTCACCCTGCCTTATGTGGCCAAAAAAATCAAAAC
CAATACAACTTATTTGTCATACGTTGTAAATAAACGATTTGGCAAATCTTTTGGTGAATACTCTAATGAGCTTAAGATTA
ATTATGTAATCAATGAAATGATTACGAATCATATGTATCGCAAATATTCAACACAGGCTATAGCAGAAAGTGTAGGTTTT
AAAAATGCTGTGTCGTTTGCTAAATCATTTCGCAAAAGAACTGGAGTTTCTCCAGCTCAATTTGCGAATAATATTTAA

Upstream 100 bases:

>100_bases
TTATATCTCAGTTAGAAAATAATCACAAATAAGGTGAATTAATTTTAGTTTATTGATAATATATAAACTAATTTTGAGAT
TCCAAAAAAACATATATTGA

Downstream 100 bases:

>100_bases
GTTTTTATTTTTATCCAAGTGTTCCTCCGCCTCCTTTAATAGGATCTTTGTTACCATCAATTGGAGGAGTTACCGGGTCA
TCGCCTCCACGAATTGCTTT

Product: response regulator receiver protein

Products: NA

Alternate protein names: Helix-Turn-Helix Domain-Containing Protein; Response Regulator Receiver Protein

Number of amino acids: Translated: 585; Mature: 585

Protein sequence:

>585_residues
MRLIISFLLFFVVNVSFSQQTKELTEQEYLLLQDKIRLNLNANRDSAAVYANEMAKSGNYKHLAFANVAQAYLLQLKDNT
AKSKEKYDQAFKYLEKMPDSKDKDQLKAYLYNYGGLIEGARGNYSKALENYQTGMKISTNIGDIIQIVKFKSNIAFINEA
IGNYQLAIKNLKQLNTFIDNNESYFTKQQFNTVKSSNNLTLAASYEGWYMKNQSPMYLLDSAAYFYKKTVSYSQNLPINN
IKAKISLGNVYYMKNDYKNAEKTYYNIVFYAKQNNLKREYKIANYNLGNLYYETKKYDKALVFFKKVDSISEIDNLRDES
FLKSNYYQAKIYNIYKEPQEAFKHSKIYLDNYEKSEAKLNNEALEVNYKLGTDDLSDEMVTIQKKYENDVLLNKALKVFY
VLLVVGIVFLLIKNIIDKNKAHKKMNALIEEFKANLEKKSIAEASEIEEMEQVPDLEEISLKKENVALSIDEAKENKIVE
KLLALESKLEYLNADFTLPYVAKKIKTNTTYLSYVVNKRFGKSFGEYSNELKINYVINEMITNHMYRKYSTQAIAESVGF
KNAVSFAKSFRKRTGVSPAQFANNI

Sequences:

>Translated_585_residues
MRLIISFLLFFVVNVSFSQQTKELTEQEYLLLQDKIRLNLNANRDSAAVYANEMAKSGNYKHLAFANVAQAYLLQLKDNT
AKSKEKYDQAFKYLEKMPDSKDKDQLKAYLYNYGGLIEGARGNYSKALENYQTGMKISTNIGDIIQIVKFKSNIAFINEA
IGNYQLAIKNLKQLNTFIDNNESYFTKQQFNTVKSSNNLTLAASYEGWYMKNQSPMYLLDSAAYFYKKTVSYSQNLPINN
IKAKISLGNVYYMKNDYKNAEKTYYNIVFYAKQNNLKREYKIANYNLGNLYYETKKYDKALVFFKKVDSISEIDNLRDES
FLKSNYYQAKIYNIYKEPQEAFKHSKIYLDNYEKSEAKLNNEALEVNYKLGTDDLSDEMVTIQKKYENDVLLNKALKVFY
VLLVVGIVFLLIKNIIDKNKAHKKMNALIEEFKANLEKKSIAEASEIEEMEQVPDLEEISLKKENVALSIDEAKENKIVE
KLLALESKLEYLNADFTLPYVAKKIKTNTTYLSYVVNKRFGKSFGEYSNELKINYVINEMITNHMYRKYSTQAIAESVGF
KNAVSFAKSFRKRTGVSPAQFANNI
>Mature_585_residues
MRLIISFLLFFVVNVSFSQQTKELTEQEYLLLQDKIRLNLNANRDSAAVYANEMAKSGNYKHLAFANVAQAYLLQLKDNT
AKSKEKYDQAFKYLEKMPDSKDKDQLKAYLYNYGGLIEGARGNYSKALENYQTGMKISTNIGDIIQIVKFKSNIAFINEA
IGNYQLAIKNLKQLNTFIDNNESYFTKQQFNTVKSSNNLTLAASYEGWYMKNQSPMYLLDSAAYFYKKTVSYSQNLPINN
IKAKISLGNVYYMKNDYKNAEKTYYNIVFYAKQNNLKREYKIANYNLGNLYYETKKYDKALVFFKKVDSISEIDNLRDES
FLKSNYYQAKIYNIYKEPQEAFKHSKIYLDNYEKSEAKLNNEALEVNYKLGTDDLSDEMVTIQKKYENDVLLNKALKVFY
VLLVVGIVFLLIKNIIDKNKAHKKMNALIEEFKANLEKKSIAEASEIEEMEQVPDLEEISLKKENVALSIDEAKENKIVE
KLLALESKLEYLNADFTLPYVAKKIKTNTTYLSYVVNKRFGKSFGEYSNELKINYVINEMITNHMYRKYSTQAIAESVGF
KNAVSFAKSFRKRTGVSPAQFANNI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67812; Mature: 67812

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION L=RR ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLIISFLLFFVVNVSFSQQTKELTEQEYLLLQDKIRLNLNANRDSAAVYANEMAKSGNY
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCCHHHHHHHHHCCCCC
KHLAFANVAQAYLLQLKDNTAKSKEKYDQAFKYLEKMPDSKDKDQLKAYLYNYGGLIEGA
CEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEECC
RGNYSKALENYQTGMKISTNIGDIIQIVKFKSNIAFINEAIGNYQLAIKNLKQLNTFIDN
CCCHHHHHHHHHCCCEEECCHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHCC
NESYFTKQQFNTVKSSNNLTLAASYEGWYMKNQSPMYLLDSAAYFYKKTVSYSQNLPINN
CCCEEHHHHHHHHCCCCCEEEEEECCCEEECCCCCEEEEHHHHHHHHHHHCCCCCCCCCC
IKAKISLGNVYYMKNDYKNAEKTYYNIVFYAKQNNLKREYKIANYNLGNLYYETKKYDKA
CEEEEEECEEEEEECCCCCCCCEEEEEEEEEECCCCCCEEEEECCCCCCEEEEHHHHHHH
LVFFKKVDSISEIDNLRDESFLKSNYYQAKIYNIYKEPQEAFKHSKIYLDNYEKSEAKLN
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHCHHHHHHCCCEEECCCCHHHHHCC
NEALEVNYKLGTDDLSDEMVTIQKKYENDVLLNKALKVFYVLLVVGIVFLLIKNIIDKNK
CCEEEEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
AHKKMNALIEEFKANLEKKSIAEASEIEEMEQVPDLEEISLKKENVALSIDEAKENKIVE
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCEEEEECHHHHHHHHH
KLLALESKLEYLNADFTLPYVAKKIKTNTTYLSYVVNKRFGKSFGEYSNELKINYVINEM
HHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHH
ITNHMYRKYSTQAIAESVGFKNAVSFAKSFRKRTGVSPAQFANNI
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHCCCC
>Mature Secondary Structure
MRLIISFLLFFVVNVSFSQQTKELTEQEYLLLQDKIRLNLNANRDSAAVYANEMAKSGNY
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCCHHHHHHHHHCCCCC
KHLAFANVAQAYLLQLKDNTAKSKEKYDQAFKYLEKMPDSKDKDQLKAYLYNYGGLIEGA
CEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEECC
RGNYSKALENYQTGMKISTNIGDIIQIVKFKSNIAFINEAIGNYQLAIKNLKQLNTFIDN
CCCHHHHHHHHHCCCEEECCHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHCC
NESYFTKQQFNTVKSSNNLTLAASYEGWYMKNQSPMYLLDSAAYFYKKTVSYSQNLPINN
CCCEEHHHHHHHHCCCCCEEEEEECCCEEECCCCCEEEEHHHHHHHHHHHCCCCCCCCCC
IKAKISLGNVYYMKNDYKNAEKTYYNIVFYAKQNNLKREYKIANYNLGNLYYETKKYDKA
CEEEEEECEEEEEECCCCCCCCEEEEEEEEEECCCCCCEEEEECCCCCCEEEEHHHHHHH
LVFFKKVDSISEIDNLRDESFLKSNYYQAKIYNIYKEPQEAFKHSKIYLDNYEKSEAKLN
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHCHHHHHHCCCEEECCCCHHHHHCC
NEALEVNYKLGTDDLSDEMVTIQKKYENDVLLNKALKVFYVLLVVGIVFLLIKNIIDKNK
CCEEEEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
AHKKMNALIEEFKANLEKKSIAEASEIEEMEQVPDLEEISLKKENVALSIDEAKENKIVE
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCEEEEECHHHHHHHHH
KLLALESKLEYLNADFTLPYVAKKIKTNTTYLSYVVNKRFGKSFGEYSNELKINYVINEM
HHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHH
ITNHMYRKYSTQAIAESVGFKNAVSFAKSFRKRTGVSPAQFANNI
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA