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The map label for this gene is lemA [H]

Identifier: 146298989

GI number: 146298989

Start: 1401109

End: 1401672

Strand: Direct

Name: lemA [H]

Synonym: Fjoh_1229

Alternate gene names: 146298989

Gene position: 1401109-1401672 (Clockwise)

Preceding gene: 146298988

Following gene: 146298990

Centisome position: 22.98

GC content: 31.56

Gene sequence:

>564_bases
ATGACTGTTCAAAATATTGCATTAATTGCCGGAATACTGCTTCTGATTATATTTTTTAATTTATTTATCAGAATTTATAA
TAAGCTGGTTATGCTGAAAAACAACTACGAAAAAGCCTTTAGAAATATCGATGTTATTTTGATGCAGAGAGCAGATGAAG
TACCGGAGTTGGTAAAAATAGTTTCTAAATTTATGGAGCACGAAACAGCAATGCTCACTAGTTTGACTAAATTAAGAACA
GATTTTCTAAACTCAAAAACAGTCGATGAAAAAATTGAAAATGCGAATGAGTTTTCAAAAGCAATGAAAAATCTTTTTGC
GGTTTCTGAAAATTATCCAACTCTTGCTTCTAACGCTAATTTTTTGGAATTACAAAAAAGAGTTTCGCAGATGGAAGATA
AAATTGCAGACAGACGTGAGTTTTTCAACGACAGTGTTAATCTTTACAATGTAGGAATTCAGGAGTTTCCTAATTTTATT
CTGGCCAAAATAGCCGGATACAAAACACAAAGTTTATTTGACGTTTCACCAGAGGAAAAAAAATACGATGGGATTCAGCT
TTAA

Upstream 100 bases:

>100_bases
TTCTTTTAGAAATAAATACAAACCGCTTTTAGATTCTCTTTTAACAACCTTGTTTTTTATAACGCTTATACTCATTTATA
TCATTTTAAATTAAAGAATT

Downstream 100 bases:

>100_bases
TACTTTTTTTGGTTACGAAAATCAAATAAACGAACTTAAAGATCAGGTTTTGATTTATGGTTTTGCCGGAATAATTTTTG
GTATTCTTGGGTTATTGTTT

Product: LemA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MTVQNIALIAGILLLIIFFNLFIRIYNKLVMLKNNYEKAFRNIDVILMQRADEVPELVKIVSKFMEHETAMLTSLTKLRT
DFLNSKTVDEKIENANEFSKAMKNLFAVSENYPTLASNANFLELQKRVSQMEDKIADRREFFNDSVNLYNVGIQEFPNFI
LAKIAGYKTQSLFDVSPEEKKYDGIQL

Sequences:

>Translated_187_residues
MTVQNIALIAGILLLIIFFNLFIRIYNKLVMLKNNYEKAFRNIDVILMQRADEVPELVKIVSKFMEHETAMLTSLTKLRT
DFLNSKTVDEKIENANEFSKAMKNLFAVSENYPTLASNANFLELQKRVSQMEDKIADRREFFNDSVNLYNVGIQEFPNFI
LAKIAGYKTQSLFDVSPEEKKYDGIQL
>Mature_186_residues
TVQNIALIAGILLLIIFFNLFIRIYNKLVMLKNNYEKAFRNIDVILMQRADEVPELVKIVSKFMEHETAMLTSLTKLRTD
FLNSKTVDEKIENANEFSKAMKNLFAVSENYPTLASNANFLELQKRVSQMEDKIADRREFFNDSVNLYNVGIQEFPNFIL
AKIAGYKTQSLFDVSPEEKKYDGIQL

Specific function: Unknown

COG id: COG1704

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LemA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007156 [H]

Pfam domain/function: PF04011 LemA [H]

EC number: NA

Molecular weight: Translated: 21663; Mature: 21532

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVQNIALIAGILLLIIFFNLFIRIYNKLVMLKNNYEKAFRNIDVILMQRADEVPELVKI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHH
VSKFMEHETAMLTSLTKLRTDFLNSKTVDEKIENANEFSKAMKNLFAVSENYPTLASNAN
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
FLELQKRVSQMEDKIADRREFFNDSVNLYNVGIQEFPNFILAKIAGYKTQSLFDVSPEEK
HHHHHHHHHHHHHHHHHHHHHHCCCCHHEECCHHHHHHHHHHHHHCCCCCCCCCCCCCHH
KYDGIQL
CCCCCCC
>Mature Secondary Structure 
TVQNIALIAGILLLIIFFNLFIRIYNKLVMLKNNYEKAFRNIDVILMQRADEVPELVKI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHH
VSKFMEHETAMLTSLTKLRTDFLNSKTVDEKIENANEFSKAMKNLFAVSENYPTLASNAN
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
FLELQKRVSQMEDKIADRREFFNDSVNLYNVGIQEFPNFILAKIAGYKTQSLFDVSPEEK
HHHHHHHHHHHHHHHHHHHHHHCCCCHHEECCHHHHHHHHHHHHHCCCCCCCCCCCCCHH
KYDGIQL
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11860552 [H]