Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is 146298967

Identifier: 146298967

GI number: 146298967

Start: 1372986

End: 1373540

Strand: Direct

Name: 146298967

Synonym: Fjoh_1207

Alternate gene names: NA

Gene position: 1372986-1373540 (Clockwise)

Preceding gene: 146298966

Following gene: 146298980

Centisome position: 22.52

GC content: 31.53

Gene sequence:

>555_bases
ATGCAGAATCAACTCATTCTTCTATTCTTATTTTTTGGATTAACTTCAATTTTTGCTCAGGAAAAGACTAAAATCATATC
AAAAGACACTCTTACTTTAGAAGCTATTGATCCGCTTCGTCCGGCAAAAGCATCGTTTTATTCGGCAATCCTGCCGGGAT
TAGGACAAGTTTACAATAAAAAATACTGGAAAGTTCCATTAGTTTATGGAGCAATTGGAACAAGTACTTATTTGTATATT
GACAATCAAAAGAAATATAATTTGTATCGAAACGAATATAAAAACAGATTAGCAGGAAATCCAAGTGAAACACCAAGTTT
AGCTAGATTAGATAACAGCAGATTAATTACTGCTCAAAAAGGATTTCAAAGAAACCGGGATTTATCGGCTTTATTTATGG
TTGGTTTTTATGTCCTAAATATTATTGACGCCAATATAGATGCCGCTTTATCGCAATTTAATGTAGATGAAAAACTGGCG
TTTAAACCTGCTGTTATAAAAAATGAGATAACATTAGATAACAATTTTGGCGTTGCTCTAAATTATTCATTTTAA

Upstream 100 bases:

>100_bases
GTTAGTTCTACTGAAAATTAAGTTTTCTTTATCTTTTATTTAAGAAATATCTTAGAACTAAAAAGTTTTCTTTGAGCAAA
ATTTTCAAAGCCAGCTTTAT

Downstream 100 bases:

>100_bases
GTTTTTTCGCAGCGAATCGAACAATAGCGAACAAGCAAAGTAAAAAAAACAAAAAGGCGTATGATTTTTTCATACGCCTT
TTAATTTTTAAACTAAATGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MQNQLILLFLFFGLTSIFAQEKTKIISKDTLTLEAIDPLRPAKASFYSAILPGLGQVYNKKYWKVPLVYGAIGTSTYLYI
DNQKKYNLYRNEYKNRLAGNPSETPSLARLDNSRLITAQKGFQRNRDLSALFMVGFYVLNIIDANIDAALSQFNVDEKLA
FKPAVIKNEITLDNNFGVALNYSF

Sequences:

>Translated_184_residues
MQNQLILLFLFFGLTSIFAQEKTKIISKDTLTLEAIDPLRPAKASFYSAILPGLGQVYNKKYWKVPLVYGAIGTSTYLYI
DNQKKYNLYRNEYKNRLAGNPSETPSLARLDNSRLITAQKGFQRNRDLSALFMVGFYVLNIIDANIDAALSQFNVDEKLA
FKPAVIKNEITLDNNFGVALNYSF
>Mature_184_residues
MQNQLILLFLFFGLTSIFAQEKTKIISKDTLTLEAIDPLRPAKASFYSAILPGLGQVYNKKYWKVPLVYGAIGTSTYLYI
DNQKKYNLYRNEYKNRLAGNPSETPSLARLDNSRLITAQKGFQRNRDLSALFMVGFYVLNIIDANIDAALSQFNVDEKLA
FKPAVIKNEITLDNNFGVALNYSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20868; Mature: 20868

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNQLILLFLFFGLTSIFAQEKTKIISKDTLTLEAIDPLRPAKASFYSAILPGLGQVYNK
CCCCEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCC
KYWKVPLVYGAIGTSTYLYIDNQKKYNLYRNEYKNRLAGNPSETPSLARLDNSRLITAQK
CEEEEEEEEEECCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCEECCCCEEEEECC
GFQRNRDLSALFMVGFYVLNIIDANIDAALSQFNVDEKLAFKPAVIKNEITLDNNFGVAL
CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHCCCCEEECCEEEECCCCCEEE
NYSF
EECC
>Mature Secondary Structure
MQNQLILLFLFFGLTSIFAQEKTKIISKDTLTLEAIDPLRPAKASFYSAILPGLGQVYNK
CCCCEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCC
KYWKVPLVYGAIGTSTYLYIDNQKKYNLYRNEYKNRLAGNPSETPSLARLDNSRLITAQK
CEEEEEEEEEECCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCEECCCCEEEEECC
GFQRNRDLSALFMVGFYVLNIIDANIDAALSQFNVDEKLAFKPAVIKNEITLDNNFGVAL
CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHCCCCEEECCEEEECCCCCEEE
NYSF
EECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA