| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146298965
Identifier: 146298965
GI number: 146298965
Start: 1371864
End: 1372325
Strand: Direct
Name: 146298965
Synonym: Fjoh_1205
Alternate gene names: NA
Gene position: 1371864-1372325 (Clockwise)
Preceding gene: 146298964
Following gene: 146298966
Centisome position: 22.5
GC content: 27.92
Gene sequence:
>462_bases ATGTTTGGACAGAGTAAATATAGACCACCAGAAACTGATCGTTTAGATTTGCTTTTAGGAAAATGCAGAGATGAAATGAC TGAAAATAACAGTGAATATTTTTATCAAAAGCAGATGCTCTGCAGGATTAAGCTTGTAGAGAGTTTTAAAGAAAAAATGA GTCCTTTTCTTCAAGATAAGCTTCTAATTGCTGAACAATATTGGAACGCATTTATACCAAATGAAAATTATCCTACTTCA GAAATTGATTTTGAGTTTATCAATCTGAGCAAAAGAAGAGATTTTGAAAAAAATGATAATGCTCAATTACATCTTCGCAT TATTAGATTATTGTTTAAAAAATATGATAGTGAATCTACTGATGAAAATATTGACTGTTTTATGTTATTTTTTGAATATT TAATTAAGTTAGGATTTTATAAAGAAGATCTCGCAGATGCAGTTGAAAATTTGTTTGAATAG
Upstream 100 bases:
>100_bases AAACTGTAGACTTATACTATGGAGAAGGTAAAGCAATTATTGAATATGAATATAAAAAGGGTGTTCAATAAACAGGTCAT CAATTTGAAAGAGTACTATT
Downstream 100 bases:
>100_bases AAATAGAAAGATAATAAACACATACTATGGAAACTTTAGTAGATTTAGTCAACTCAACAAATTATAATGTTTTATTAGAA AATGTTAGATCAAGAATTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MFGQSKYRPPETDRLDLLLGKCRDEMTENNSEYFYQKQMLCRIKLVESFKEKMSPFLQDKLLIAEQYWNAFIPNENYPTS EIDFEFINLSKRRDFEKNDNAQLHLRIIRLLFKKYDSESTDENIDCFMLFFEYLIKLGFYKEDLADAVENLFE
Sequences:
>Translated_153_residues MFGQSKYRPPETDRLDLLLGKCRDEMTENNSEYFYQKQMLCRIKLVESFKEKMSPFLQDKLLIAEQYWNAFIPNENYPTS EIDFEFINLSKRRDFEKNDNAQLHLRIIRLLFKKYDSESTDENIDCFMLFFEYLIKLGFYKEDLADAVENLFE >Mature_153_residues MFGQSKYRPPETDRLDLLLGKCRDEMTENNSEYFYQKQMLCRIKLVESFKEKMSPFLQDKLLIAEQYWNAFIPNENYPTS EIDFEFINLSKRRDFEKNDNAQLHLRIIRLLFKKYDSESTDENIDCFMLFFEYLIKLGFYKEDLADAVENLFE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18554; Mature: 18554
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGQSKYRPPETDRLDLLLGKCRDEMTENNSEYFYQKQMLCRIKLVESFKEKMSPFLQDK CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLIAEQYWNAFIPNENYPTSEIDFEFINLSKRRDFEKNDNAQLHLRIIRLLFKKYDSEST HHHHHHHHHHCCCCCCCCCCCCCHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCC DENIDCFMLFFEYLIKLGFYKEDLADAVENLFE CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC >Mature Secondary Structure MFGQSKYRPPETDRLDLLLGKCRDEMTENNSEYFYQKQMLCRIKLVESFKEKMSPFLQDK CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLIAEQYWNAFIPNENYPTSEIDFEFINLSKRRDFEKNDNAQLHLRIIRLLFKKYDSEST HHHHHHHHHHCCCCCCCCCCCCCHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCC DENIDCFMLFFEYLIKLGFYKEDLADAVENLFE CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA