Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146298827

Identifier: 146298827

GI number: 146298827

Start: 1209702

End: 1210481

Strand: Direct

Name: 146298827

Synonym: Fjoh_1066

Alternate gene names: NA

Gene position: 1209702-1210481 (Clockwise)

Preceding gene: 146298826

Following gene: 146298828

Centisome position: 19.84

GC content: 29.74

Gene sequence:

>780_bases
ATGAAAAAATATATTATAATAGTATTAATATCGGTTTTTGTGGTTTCATGTAAATCAAAAGCCGTTGCTGTTCAGAACAC
TAATACTGCCGAAGTCGTTACAAAAAAAGACAATAAAGCAATAGAGAAACATTACGAAAACAAACTGGATTTTTCAACCT
TATACATAAAAGCCAGCGCTAAATATGTTGACGAAAAACAAAGTCAAAACGTTACTGCCGAAATAAGAATCGAGAAAGAC
AAACAGATTTTAATAAGCGTTAGATTCTTGGGAATTACAATGGCAAAAGCTTTAATAACACCATCAGCAGTAAGTTATTA
CGAAAAAATAAACAGTACATATTACGAAGGAGATTTTAGCAGTTTAAGCAAATGGCTGGGAACTGAATTAGATTATACAA
AAGTTCAAAACTTATTAATTGGTGAAGCTTTTGACGATTTAAGAGAAGGAAAATATACTCAGACTATTGTAGAAAATCTT
TTCCGTTTAGAAGATCAAAAAGATGAAAACATTAAAAAAGCATTTTACTTAGATCCTGAAAAATATTTAGTTCAGAAAGA
AGAGATTTCGCAGCCATCTGAAAACAGAAAACTAGAAATCAATTATTCTGATATTAAAATATACAATCAAGGAACAATTC
CAACGGCTATCGCAATTAATGCTGTACAGCCTAAAGGAACTACCAATATTAATCTGAATTACAATAACATTTCATTTAAC
GAAGAACTTTCTTTTCCTTATAGCGTACCAAGCGGTTATAAAAAAGTTTTAATTAAGTAA

Upstream 100 bases:

>100_bases
GGGAGAAGCATATAATGGATTAGGAGATGCTAAGAAAAAAGAGGAATACTTTTTGAAGGCAAACGAATTATTAAAACAAA
AGAAGTAAGGAGAAATTAAG

Downstream 100 bases:

>100_bases
ATTTGCAAAAATATAAATAGAAAGATGCCGAAATTTCTCCTAAGCCTAATTTTTGTTTGTGCCACGACTTTTGTCTGGGC
GCAGGATTCGCAGCAAGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MKKYIIIVLISVFVVSCKSKAVAVQNTNTAEVVTKKDNKAIEKHYENKLDFSTLYIKASAKYVDEKQSQNVTAEIRIEKD
KQILISVRFLGITMAKALITPSAVSYYEKINSTYYEGDFSSLSKWLGTELDYTKVQNLLIGEAFDDLREGKYTQTIVENL
FRLEDQKDENIKKAFYLDPEKYLVQKEEISQPSENRKLEINYSDIKIYNQGTIPTAIAINAVQPKGTTNINLNYNNISFN
EELSFPYSVPSGYKKVLIK

Sequences:

>Translated_259_residues
MKKYIIIVLISVFVVSCKSKAVAVQNTNTAEVVTKKDNKAIEKHYENKLDFSTLYIKASAKYVDEKQSQNVTAEIRIEKD
KQILISVRFLGITMAKALITPSAVSYYEKINSTYYEGDFSSLSKWLGTELDYTKVQNLLIGEAFDDLREGKYTQTIVENL
FRLEDQKDENIKKAFYLDPEKYLVQKEEISQPSENRKLEINYSDIKIYNQGTIPTAIAINAVQPKGTTNINLNYNNISFN
EELSFPYSVPSGYKKVLIK
>Mature_259_residues
MKKYIIIVLISVFVVSCKSKAVAVQNTNTAEVVTKKDNKAIEKHYENKLDFSTLYIKASAKYVDEKQSQNVTAEIRIEKD
KQILISVRFLGITMAKALITPSAVSYYEKINSTYYEGDFSSLSKWLGTELDYTKVQNLLIGEAFDDLREGKYTQTIVENL
FRLEDQKDENIKKAFYLDPEKYLVQKEEISQPSENRKLEINYSDIKIYNQGTIPTAIAINAVQPKGTTNINLNYNNISFN
EELSFPYSVPSGYKKVLIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29653; Mature: 29653

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKYIIIVLISVFVVSCKSKAVAVQNTNTAEVVTKKDNKAIEKHYENKLDFSTLYIKASA
CCCEEEHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCHHHHHHHCCCCCEEEEEEEECC
KYVDEKQSQNVTAEIRIEKDKQILISVRFLGITMAKALITPSAVSYYEKINSTYYEGDFS
HHHHHHHCCCCEEEEEEECCCEEEEEEEHHHHHHHHHHHCCHHHHHHHHHCCEEECCCHH
SLSKWLGTELDYTKVQNLLIGEAFDDLREGKYTQTIVENLFRLEDQKDENIKKAFYLDPE
HHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCEEEEECHH
KYLVQKEEISQPSENRKLEINYSDIKIYNQGTIPTAIAINAVQPKGTTNINLNYNNISFN
HHHHHHHHCCCCCCCCEEEEEEEEEEEEECCCCCEEEEEEEECCCCCEEEEEEECCCCCC
EELSFPYSVPSGYKKVLIK
CCCCCCCCCCCCCCEEECC
>Mature Secondary Structure
MKKYIIIVLISVFVVSCKSKAVAVQNTNTAEVVTKKDNKAIEKHYENKLDFSTLYIKASA
CCCEEEHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCHHHHHHHCCCCCEEEEEEEECC
KYVDEKQSQNVTAEIRIEKDKQILISVRFLGITMAKALITPSAVSYYEKINSTYYEGDFS
HHHHHHHCCCCEEEEEEECCCEEEEEEEHHHHHHHHHHHCCHHHHHHHHHCCEEECCCHH
SLSKWLGTELDYTKVQNLLIGEAFDDLREGKYTQTIVENLFRLEDQKDENIKKAFYLDPE
HHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCEEEEECHH
KYLVQKEEISQPSENRKLEINYSDIKIYNQGTIPTAIAINAVQPKGTTNINLNYNNISFN
HHHHHHHHCCCCCCCCEEEEEEEEEEEEECCCCCEEEEEEEECCCCCEEEEEEECCCCCC
EELSFPYSVPSGYKKVLIK
CCCCCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA