| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146298810
Identifier: 146298810
GI number: 146298810
Start: 1192938
End: 1194398
Strand: Direct
Name: 146298810
Synonym: Fjoh_1049
Alternate gene names: NA
Gene position: 1192938-1194398 (Clockwise)
Preceding gene: 146298807
Following gene: 146298811
Centisome position: 19.57
GC content: 29.71
Gene sequence:
>1461_bases ATGATTAAAAAGTTTATTTATCTCGAATGGAAAGCCTTTATTAGGTCGGCGTCATTTGGTAAAAACCTGGCAATGAAAAT TATAATAGGTTTTTTAATGATATATTTTTCATTAATTTTTGTTGCAATGGGCGTTGGGGCATTTTATATTCTAAAAGACA TGAATCTGGAACCATTAGTAACAGTAAACAAATTTTTAATTTATTATTTCCTCTTTGATTTAGTAATAAGGTTATTACTT CAATCGATTCCTGTTCTCAATATCAAACCATTATTGGTTTTACCATTTAAAAAACCAGTAATTGTTCATTTTTCATTAGG AAAAACAGTTTTATCTTTTTTTAACTGGGTTCACGCTTTATTTTTTGTGCCTTTTTCAGTTGTATTAATCTTAGAAGGAT ACGACGTTATTGGAATCGTTTTTTGGTATTTAGGAGCAATGGCTTTTATTTATATCAATAATTTTTTGAATATTATTTTA AGCAATATTGACAGATTGTTTGTTGTATTTGTGGCTTTAATTTTGGCTTTGGCAGGGGCACAGTATTATCAATTGTTTGA TATTACAACATTTACGACTCCGTTTTTTCAGAATTTTTATAATATAGAAGGCCTGTTTTTAATTCCTGTTTTAGTTTTAG CAGGCTTATATGTTTTTACTTTTAAATATTTTAAAAATAACTTATTTCTGGACGCTGGACTATCTGTAAAACATGATGTT GCAACTACAGAAAATCTTTCATGGCTCAATCAGTTTGGAACTTTGGGCACTTTTCTAAAAAATGATATTAAACTGATAAA AAGAAACAAAAGATCAAAAACAACAATTGTAATGAGTGTGATCTTTTTGTTTTATGGATTGATTTTTTTTGGTAATACAC ACCAGCCGCCAGCTATGCAGATTTTTGCAGGAATATTTGTTTCGGGAGGATTTCTATTTGTCTTTGGACAATTTGTACCA AGCTGGGACAGTTCGTATTATCAATTAATGATGACACAAAATATTCCGTATCGAGGTTACATTACATCAAAATGGTGGCT TATTGTTATTGCAACTTTTATTTCGACTATACTGGCTTCTTTTTACCTCCTTTATGGATGGGAAGTATATTTAACAATTG TAGTTGGGGCAATTTATAATATTGGAGTAAATTCTCATTTAGTGCTTTTGGGCGGTGCATTTACTAAAACGCCAATAGAT TTAAGTATTGCCGGCGGTGCTTTTACAGATAAAAAAGTGTTTAATGTAAGTGCCATTCTTTTATCACTGCCAAAAATATT TTTACCATTATTACTGTATTGGCTTGGATTACATTATGCAGATAAAACAGTGGCACTAAGTTTGGTTGCGGGCGCTGGTA TTTTGGGTTTTATATTTAAAGAAAAAGTTTTTTCATTAATCGAAAAAAGATATAAAATTGAAAAATACAGTACAATAAGT GCTTATAAACAAAAGAGTTAA
Upstream 100 bases:
>100_bases CCATAAGTAATTGACACTTACTAAAATATTTTTTTTAACTTTTTTTGTAACGTTTTCCTACATTTGGTCTCTTACTACAA AAATCCAAACTAAATTAACC
Downstream 100 bases:
>100_bases TTAGATAATTAATCTAAAATAAAAAATCTACAACTATACCATGATACAAGTAAATCAACTATCAAAAAAATATAACGGAA CTACAGTTTTGAATATTAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 486; Mature: 486
Protein sequence:
>486_residues MIKKFIYLEWKAFIRSASFGKNLAMKIIIGFLMIYFSLIFVAMGVGAFYILKDMNLEPLVTVNKFLIYYFLFDLVIRLLL QSIPVLNIKPLLVLPFKKPVIVHFSLGKTVLSFFNWVHALFFVPFSVVLILEGYDVIGIVFWYLGAMAFIYINNFLNIIL SNIDRLFVVFVALILALAGAQYYQLFDITTFTTPFFQNFYNIEGLFLIPVLVLAGLYVFTFKYFKNNLFLDAGLSVKHDV ATTENLSWLNQFGTLGTFLKNDIKLIKRNKRSKTTIVMSVIFLFYGLIFFGNTHQPPAMQIFAGIFVSGGFLFVFGQFVP SWDSSYYQLMMTQNIPYRGYITSKWWLIVIATFISTILASFYLLYGWEVYLTIVVGAIYNIGVNSHLVLLGGAFTKTPID LSIAGGAFTDKKVFNVSAILLSLPKIFLPLLLYWLGLHYADKTVALSLVAGAGILGFIFKEKVFSLIEKRYKIEKYSTIS AYKQKS
Sequences:
>Translated_486_residues MIKKFIYLEWKAFIRSASFGKNLAMKIIIGFLMIYFSLIFVAMGVGAFYILKDMNLEPLVTVNKFLIYYFLFDLVIRLLL QSIPVLNIKPLLVLPFKKPVIVHFSLGKTVLSFFNWVHALFFVPFSVVLILEGYDVIGIVFWYLGAMAFIYINNFLNIIL SNIDRLFVVFVALILALAGAQYYQLFDITTFTTPFFQNFYNIEGLFLIPVLVLAGLYVFTFKYFKNNLFLDAGLSVKHDV ATTENLSWLNQFGTLGTFLKNDIKLIKRNKRSKTTIVMSVIFLFYGLIFFGNTHQPPAMQIFAGIFVSGGFLFVFGQFVP SWDSSYYQLMMTQNIPYRGYITSKWWLIVIATFISTILASFYLLYGWEVYLTIVVGAIYNIGVNSHLVLLGGAFTKTPID LSIAGGAFTDKKVFNVSAILLSLPKIFLPLLLYWLGLHYADKTVALSLVAGAGILGFIFKEKVFSLIEKRYKIEKYSTIS AYKQKS >Mature_486_residues MIKKFIYLEWKAFIRSASFGKNLAMKIIIGFLMIYFSLIFVAMGVGAFYILKDMNLEPLVTVNKFLIYYFLFDLVIRLLL QSIPVLNIKPLLVLPFKKPVIVHFSLGKTVLSFFNWVHALFFVPFSVVLILEGYDVIGIVFWYLGAMAFIYINNFLNIIL SNIDRLFVVFVALILALAGAQYYQLFDITTFTTPFFQNFYNIEGLFLIPVLVLAGLYVFTFKYFKNNLFLDAGLSVKHDV ATTENLSWLNQFGTLGTFLKNDIKLIKRNKRSKTTIVMSVIFLFYGLIFFGNTHQPPAMQIFAGIFVSGGFLFVFGQFVP SWDSSYYQLMMTQNIPYRGYITSKWWLIVIATFISTILASFYLLYGWEVYLTIVVGAIYNIGVNSHLVLLGGAFTKTPID LSIAGGAFTDKKVFNVSAILLSLPKIFLPLLLYWLGLHYADKTVALSLVAGAGILGFIFKEKVFSLIEKRYKIEKYSTIS AYKQKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55446; Mature: 55446
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKKFIYLEWKAFIRSASFGKNLAMKIIIGFLMIYFSLIFVAMGVGAFYILKDMNLEPLV CCCCEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHH TVNKFLIYYFLFDLVIRLLLQSIPVLNIKPLLVLPFKKPVIVHFSLGKTVLSFFNWVHAL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEEEHHHHHHHHHHHHHHH FFVPFSVVLILEGYDVIGIVFWYLGAMAFIYINNFLNIILSNIDRLFVVFVALILALAGA HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC QYYQLFDITTFTTPFFQNFYNIEGLFLIPVLVLAGLYVFTFKYFKNNLFLDAGLSVKHDV HHHEEEEHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCC ATTENLSWLNQFGTLGTFLKNDIKLIKRNKRSKTTIVMSVIFLFYGLIFFGNTHQPPAMQ CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHH IFAGIFVSGGFLFVFGQFVPSWDSSYYQLMMTQNIPYRGYITSKWWLIVIATFISTILAS HHHHHHHHCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCEECCHHHHHHHHHHHHHHHHH FYLLYGWEVYLTIVVGAIYNIGVNSHLVLLGGAFTKTPIDLSIAGGAFTDKKVFNVSAIL HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEECCCCCCCCHHHHHHHHH LSLPKIFLPLLLYWLGLHYADKTVALSLVAGAGILGFIFKEKVFSLIEKRYKIEKYSTIS HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AYKQKS HHHCCC >Mature Secondary Structure MIKKFIYLEWKAFIRSASFGKNLAMKIIIGFLMIYFSLIFVAMGVGAFYILKDMNLEPLV CCCCEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHH TVNKFLIYYFLFDLVIRLLLQSIPVLNIKPLLVLPFKKPVIVHFSLGKTVLSFFNWVHAL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEEEHHHHHHHHHHHHHHH FFVPFSVVLILEGYDVIGIVFWYLGAMAFIYINNFLNIILSNIDRLFVVFVALILALAGA HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC QYYQLFDITTFTTPFFQNFYNIEGLFLIPVLVLAGLYVFTFKYFKNNLFLDAGLSVKHDV HHHEEEEHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCC ATTENLSWLNQFGTLGTFLKNDIKLIKRNKRSKTTIVMSVIFLFYGLIFFGNTHQPPAMQ CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHH IFAGIFVSGGFLFVFGQFVPSWDSSYYQLMMTQNIPYRGYITSKWWLIVIATFISTILAS HHHHHHHHCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCEECCHHHHHHHHHHHHHHHHH FYLLYGWEVYLTIVVGAIYNIGVNSHLVLLGGAFTKTPIDLSIAGGAFTDKKVFNVSAIL HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEECCCCCCCCHHHHHHHHH LSLPKIFLPLLLYWLGLHYADKTVALSLVAGAGILGFIFKEKVFSLIEKRYKIEKYSTIS HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AYKQKS HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA