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The map label for this gene is opsX [H]

Identifier: 146298807

GI number: 146298807

Start: 1189845

End: 1190852

Strand: Direct

Name: opsX [H]

Synonym: Fjoh_1046

Alternate gene names: 146298807

Gene position: 1189845-1190852 (Clockwise)

Preceding gene: 146298806

Following gene: 146298810

Centisome position: 19.52

GC content: 34.33

Gene sequence:

>1008_bases
ATGAGACTATCCGCAATGGGAGATGTCGCCATGACGGTTCCTGTTTTACGTGCTTTTGTAAAACAATATCCAACGGTAAA
ACTAACCGTTATTTCGCGTCCGTTTTTCAAACCTTTTTTTGAAGGAATTCCAAATCTTGAGTTTTTTGCTTTTGATGAAA
AAGAAAAACATAAAGGTTTTCCTGGTCTTCTACGCTTATATAAAGACATAAAAAAACTAAAAGTTGATGCTTTTGCAGAT
CTTCATAATGTTTTAAGATCTAAGGTTGTGAGTTTGCTTTTCGCTTTAAGCGGAAAAAAAAGAGCCACTGTTGACAAAGG
ACGCGAAGGAAAAAAAGAATTGACAAGAGTTGAAAACAAGATTTTCAAGCAATTGCCAACCATGTTCCAAAGACATGCAA
AAGTTTTTGAAGAACTTGGTTTTCCTCTAAACTTATCGAATCCGCAATTTCCTGAAAAAGCAGTTTTAAACTCTGATATT
CTAGACATTATCGGAAATGAAAATCAAAAACTTATCGGAATTGCGCCTTTTGCACAATATAATTCTAAAGTTTATCCTTT
AGATTTAATGAAAGAAGTAATTGCAAAATTAGCTGAAAATTCATCGTACAAAATTTTACTTTTTGGAGGCGGAAAGAAAG
AAATCGAAATACTGGATTCACTTTCAGAACCGTATAAAAATGTAATTAATATGGCTGGAAAAATTAAGTTTCAGCAGGAA
TTACAATTAATAAGCAATCTTGATGTGATGCTTTCTATGGATTCTGGAAATGCTCACATTGCAGCAATGCTGGGTGTAAA
AGTCGTTACGCTTTGGGGCGCTACACATCCATACGCAGGATTCTTACCTTTTAACCAAAGTTTAGAAAACGCTTTAACTT
CAGACCGAAATCAATATCCAAAACTGCCAACATCAGTTTATGGTAATAAAATTGTTGAAGGTTATGAGGATGCGATGAGG
ACAATTTTACCGCAAAAGGTTGTTGACAAAGTTGTAGAGCAGCTTTAA

Upstream 100 bases:

>100_bases
ATGAAAATGTACAACGACGACGAATTGAACCCGGTTTTATATCAAAATAAAAAATAATTTGGCAGAGTTGTCGAACAACA
AGATTAAACATATAGCCGTC

Downstream 100 bases:

>100_bases
TGAAAGACTAAAAAGAGTTTTTTTGTAAGCTTCGGAGAAGCAAAATATTTATAGCAAAGAATGGTATTCACAAAGTAAAA
GCTCCGGCGGAGCGACATAT

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MRLSAMGDVAMTVPVLRAFVKQYPTVKLTVISRPFFKPFFEGIPNLEFFAFDEKEKHKGFPGLLRLYKDIKKLKVDAFAD
LHNVLRSKVVSLLFALSGKKRATVDKGREGKKELTRVENKIFKQLPTMFQRHAKVFEELGFPLNLSNPQFPEKAVLNSDI
LDIIGNENQKLIGIAPFAQYNSKVYPLDLMKEVIAKLAENSSYKILLFGGGKKEIEILDSLSEPYKNVINMAGKIKFQQE
LQLISNLDVMLSMDSGNAHIAAMLGVKVVTLWGATHPYAGFLPFNQSLENALTSDRNQYPKLPTSVYGNKIVEGYEDAMR
TILPQKVVDKVVEQL

Sequences:

>Translated_335_residues
MRLSAMGDVAMTVPVLRAFVKQYPTVKLTVISRPFFKPFFEGIPNLEFFAFDEKEKHKGFPGLLRLYKDIKKLKVDAFAD
LHNVLRSKVVSLLFALSGKKRATVDKGREGKKELTRVENKIFKQLPTMFQRHAKVFEELGFPLNLSNPQFPEKAVLNSDI
LDIIGNENQKLIGIAPFAQYNSKVYPLDLMKEVIAKLAENSSYKILLFGGGKKEIEILDSLSEPYKNVINMAGKIKFQQE
LQLISNLDVMLSMDSGNAHIAAMLGVKVVTLWGATHPYAGFLPFNQSLENALTSDRNQYPKLPTSVYGNKIVEGYEDAMR
TILPQKVVDKVVEQL
>Mature_335_residues
MRLSAMGDVAMTVPVLRAFVKQYPTVKLTVISRPFFKPFFEGIPNLEFFAFDEKEKHKGFPGLLRLYKDIKKLKVDAFAD
LHNVLRSKVVSLLFALSGKKRATVDKGREGKKELTRVENKIFKQLPTMFQRHAKVFEELGFPLNLSNPQFPEKAVLNSDI
LDIIGNENQKLIGIAPFAQYNSKVYPLDLMKEVIAKLAENSSYKILLFGGGKKEIEILDSLSEPYKNVINMAGKIKFQQE
LQLISNLDVMLSMDSGNAHIAAMLGVKVVTLWGATHPYAGFLPFNQSLENALTSDRNQYPKLPTSVYGNKIVEGYEDAMR
TILPQKVVDKVVEQL

Specific function: Lipopolysaccharide core biosynthesis. [C]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 9 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002201 [H]

Pfam domain/function: PF01075 Glyco_transf_9 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 37772; Mature: 37772

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLSAMGDVAMTVPVLRAFVKQYPTVKLTVISRPFFKPFFEGIPNLEFFAFDEKEKHKGF
CCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHCCCCCCEEEEECCHHHHCCC
PGLLRLYKDIKKLKVDAFADLHNVLRSKVVSLLFALSGKKRATVDKGREGKKELTRVENK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
IFKQLPTMFQRHAKVFEELGFPLNLSNPQFPEKAVLNSDILDIIGNENQKLIGIAPFAQY
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCHHHHHHCCCCCEEEEEECHHHH
NSKVYPLDLMKEVIAKLAENSSYKILLFGGGKKEIEILDSLSEPYKNVINMAGKIKFQQE
CCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH
LQLISNLDVMLSMDSGNAHIAAMLGVKVVTLWGATHPYAGFLPFNQSLENALTSDRNQYP
HHHHCCCCEEEEECCCCCEEHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHCCCCCCC
KLPTSVYGNKIVEGYEDAMRTILPQKVVDKVVEQL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MRLSAMGDVAMTVPVLRAFVKQYPTVKLTVISRPFFKPFFEGIPNLEFFAFDEKEKHKGF
CCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHCCCCCCEEEEECCHHHHCCC
PGLLRLYKDIKKLKVDAFADLHNVLRSKVVSLLFALSGKKRATVDKGREGKKELTRVENK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
IFKQLPTMFQRHAKVFEELGFPLNLSNPQFPEKAVLNSDILDIIGNENQKLIGIAPFAQY
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCHHHHHHCCCCCEEEEEECHHHH
NSKVYPLDLMKEVIAKLAENSSYKILLFGGGKKEIEILDSLSEPYKNVINMAGKIKFQQE
CCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH
LQLISNLDVMLSMDSGNAHIAAMLGVKVVTLWGATHPYAGFLPFNQSLENALTSDRNQYP
HHHHCCCCEEEEECCCCCEEHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHCCCCCCC
KLPTSVYGNKIVEGYEDAMRTILPQKVVDKVVEQL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]